RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 TCP1P17987 556 aaKnown RBP6.54□□□□□ -1.36
CDKL5-205ENST00000623535 RPS7P62081 194 aaKnown RBP6.54□□□□□ -1.36
CDKL5-205ENST00000623535 ACOX1Q15067 660 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 FAM102AQ5T9C2 384 aaPredicted RBP6.54□□□□□ -1.36
CDKL5-205ENST00000623535 ZNF496Q96IT1 587 aaPredicted RBP6.54□□□□□ -1.36
CDKL5-205ENST00000623535 QRFPRQ96P65 431 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 ARHGEF3Q9NR81 526 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 ANGPT2O15123 496 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 PRODHO43272 600 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 CYP7B1O75881 506 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 DGAT1O75907 488 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 FARP2O94887 1054 aaPredicted RBP6.54□□□□□ -1.36
CDKL5-205ENST00000623535 CCNDBP1O95273 360 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 CAPN1P07384 714 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 PIM1P11309 404 aaPredicted RBP6.54□□□□□ -1.36
CDKL5-205ENST00000623535 TAF6P49848 677 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 BLKP51451 505 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 CCR4P51679 360 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 BCAR1P56945 870 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 TSHZ3Q63HK5 1081 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 CYP4Z2PQ8N1L4 340 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 DENND1AQ8TEH3 1009 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 SEZ6LQ9BYH1 1024 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 VAV3Q9UKW4 847 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 VWA5AO00534 786 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 KLHL38Q2WGJ6 581 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 NAA35Q5VZE5 725 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 BHLHB9Q6PI77 547 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 BTN2A1Q7KYR7 527 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 TRIML2Q8N7C3 387 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 IL12RB2Q99665 862 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 WHRNQ9P202 907 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 PRR12Q9ULL5 1215 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 MAP3K1Q13233 1512 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 VPS26AO75436 327 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 CDK8P49336 464 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 RPTNQ6XPR3 784 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 MACC1Q6ZN28 852 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 HORMAD1Q86X24 394 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.54□□□□□ -1.36
CDKL5-205ENST00000623535 KCNJ9Q92806 393 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 RMND5BQ96G75 393 aaPredicted RBP6.54□□□□□ -1.36
CDKL5-205ENST00000623535 DHTKD1Q96HY7 919 aaPredicted RBP6.54□□□□□ -1.36
CDKL5-205ENST00000623535 ZNF512BQ96KM6 892 aaPredicted RBP6.54□□□□□ -1.36
CDKL5-205ENST00000623535 SLITRK2Q9H156 845 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 SH3GLB2Q9NR46 395 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 MEFVO15553 781 aaPredicted RBP6.54□□□□□ -1.36
CDKL5-205ENST00000623535 DLX3O60479 287 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 ESRRAP11474 423 aaPredicted RBP6.54□□□□□ -1.36
CDKL5-205ENST00000623535 SOX6P35712 828 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 CACHD1Q5VU97 1274 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 ALS2CLQ60I27 953 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 PLA2G4FQ68DD2 849 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 TCEAL6Q6IPX3 200 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 SERPINA13PQ6UXR4 307 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 WDR60Q8WVS4 1066 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 PIGUQ9H490 435 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 LGR6Q9HBX8 967 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 KIF1BO60333 1816 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 CLEC3AO75596 197 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 B3GAT3O94766 335 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 IGSF6O95976 241 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 FGRP09769 529 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 PTPN1P18031 435 aaKnown RBP6.54□□□□□ -1.36
CDKL5-205ENST00000623535 KCNJ5P48544 419 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 SLC15A2Q16348 729 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 AASDHQ4L235 1098 aaPredicted RBP6.54□□□□□ -1.36
CDKL5-205ENST00000623535 ADSSL1Q8N142 457 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 DEPDC4Q8N2C3 294 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 BEND7Q8N7W2 519 aaPredicted RBP6.54□□□□□ -1.36
CDKL5-205ENST00000623535 TMX3Q96JJ7 454 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 ARHGEF38Q9NXL2 777 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 UBQLN1Q9UMX0 589 aaKnown RBP6.54□□□□□ -1.36
CDKL5-205ENST00000623535 LRRC72A6NJI9 287 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 WASHC1A8K0Z3 465 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 WASH3PC4AMC7 463 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 NCK2O43639 380 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 ITIH2P19823 946 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 ITGA9Q13797 1035 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 SF3B4Q15427 424 aaKnown RBP eCLIP6.54□□□□□ -1.36
CDKL5-205ENST00000623535 XKR3Q5GH77 459 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 ZNF484Q5JVG2 852 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 EFHC1Q5JVL4 640 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 WASH2PQ6VEQ5 465 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 TMEM159Q96B96 161 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 PHACTR3Q96KR7 559 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 STMN3Q9NZ72 180 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 APOBEC2Q9Y235 224 aaKnown RBP6.54□□□□□ -1.36
CDKL5-205ENST00000623535 CYTH3O43739 400 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 SNX4O95219 450 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 IL10P22301 178 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 RESTQ13127 1097 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 UBXN2BQ14CS0 331 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 PSRC1Q6PGN9 363 aaPredicted RBP6.54□□□□□ -1.36
CDKL5-205ENST00000623535 ENAHQ8N8S7 591 aaPredicted RBP6.54□□□□□ -1.36
CDKL5-205ENST00000623535 ZNF555Q8NEP9 628 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 CRAMP1Q96RY5 1269 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 PNKPQ96T60 521 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 TTLL2Q9BWV7 592 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 BCO2Q9BYV7 579 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms