RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 CEBPBP17676 345 aa21.38■■□□□ 1.01
SSBP4-210ENST00000601444 CACNA2D1P54289 1103 aa21.38■■□□□ 1.01
SSBP4-210ENST00000601444 INCA1Q0VD86 236 aa21.38■■□□□ 1.01
SSBP4-210ENST00000601444 MTMR3Q13615 1198 aa21.38■■□□□ 1.01
SSBP4-210ENST00000601444 MAPRE1Q15691 268 aaKnown RBP21.38■■□□□ 1.01
SSBP4-210ENST00000601444 STX1AQ16623 288 aa21.38■■□□□ 1.01
SSBP4-210ENST00000601444 C4orf50Q6ZRC1 276 aa21.38■■□□□ 1.01
SSBP4-210ENST00000601444 PDZD4Q76G19 769 aaPredicted RBP21.38■■□□□ 1.01
SSBP4-210ENST00000601444 SCN4BQ8IWT1 228 aa21.38■■□□□ 1.01
SSBP4-210ENST00000601444 ZDHHC14Q8IZN3 488 aa21.38■■□□□ 1.01
SSBP4-210ENST00000601444 FUBP3Q96I24 572 aaKnown RBP eCLIP21.38■■□□□ 1.01
SSBP4-210ENST00000601444 ZNF518BQ9C0D4 1074 aa21.38■■□□□ 1.01
SSBP4-210ENST00000601444 AVENQ9NQS1 362 aaPredicted RBP21.38■■□□□ 1.01
SSBP4-210ENST00000601444 TMEM30AQ9NV96 361 aa21.38■■□□□ 1.01
SSBP4-210ENST00000601444 ANO10Q9NW15 660 aa21.38■■□□□ 1.01
SSBP4-210ENST00000601444 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.38■■□□□ 1.01
SSBP4-210ENST00000601444 MUTYHQ9UIF7 546 aa21.38■■□□□ 1.01
SSBP4-210ENST00000601444 LAMP2P13473 410 aa21.37■■□□□ 1.01
SSBP4-210ENST00000601444 MTIF2P46199 727 aaKnown RBP21.37■■□□□ 1.01
SSBP4-210ENST00000601444 EPHA5P54756 1037 aa21.37■■□□□ 1.01
SSBP4-210ENST00000601444 TYRO3Q06418 890 aa21.37■■□□□ 1.01
SSBP4-210ENST00000601444 KLHL40Q2TBA0 621 aa21.37■■□□□ 1.01
SSBP4-210ENST00000601444 CYP4A22Q5TCH4 519 aa21.37■■□□□ 1.01
SSBP4-210ENST00000601444 PAQR9Q6ZVX9 377 aa21.37■■□□□ 1.01
SSBP4-210ENST00000601444 UNC93AQ86WB7 457 aa21.37■■□□□ 1.01
SSBP4-210ENST00000601444 CRYBG2Q8N1P7 616 aa21.37■■□□□ 1.01
SSBP4-210ENST00000601444 PLCD3Q8N3E9 789 aa21.37■■□□□ 1.01
SSBP4-210ENST00000601444 C12orf29Q8N999 325 aa21.37■■□□□ 1.01
SSBP4-210ENST00000601444 EHBP1Q8NDI1 1231 aa21.37■■□□□ 1.01
SSBP4-210ENST00000601444 ENOX1Q8TC92 643 aaKnown RBP21.37■■□□□ 1.01
SSBP4-210ENST00000601444 ELOVL4Q9GZR5 314 aa21.37■■□□□ 1.01
SSBP4-210ENST00000601444 ASAH2Q9NR71 780 aa21.37■■□□□ 1.01
SSBP4-210ENST00000601444 CDH7Q9ULB5 785 aa21.37■■□□□ 1.01
SSBP4-210ENST00000601444 NFE2L3Q9Y4A8 694 aa21.37■■□□□ 1.01
SSBP4-210ENST00000601444 P4HA2O15460 535 aa21.36■■□□□ 1.01
SSBP4-210ENST00000601444 CILPO75339 1184 aa21.36■■□□□ 1.01
SSBP4-210ENST00000601444 CCDC130P13994 396 aa21.36■■□□□ 1.01
SSBP4-210ENST00000601444 CUL2Q13617 745 aa21.36■■□□□ 1.01
SSBP4-210ENST00000601444 VEPH1Q14D04 833 aa21.36■■□□□ 1.01
SSBP4-210ENST00000601444 ZNF394Q53GI3 561 aa21.36■■□□□ 1.01
SSBP4-210ENST00000601444 NPAS3Q8IXF0 933 aa21.36■■□□□ 1.01
SSBP4-210ENST00000601444 RSAD2Q8WXG1 361 aa21.36■■□□□ 1.01
SSBP4-210ENST00000601444 KAT5Q92993 513 aa21.36■■□□□ 1.01
SSBP4-210ENST00000601444 MCRS1Q96EZ8 462 aa21.36■■□□□ 1.01
SSBP4-210ENST00000601444 TNIP3Q96KP6 325 aa21.36■■□□□ 1.01
SSBP4-210ENST00000601444 CISHQ9NSE2 258 aa21.36■■□□□ 1.01
SSBP4-210ENST00000601444 EPS15L1Q9UBC2 864 aa21.36■■□□□ 1.01
SSBP4-210ENST00000601444 ASB3Q9Y575 518 aa21.36■■□□□ 1.01
SSBP4-210ENST00000601444 A0A1W2PRU2 124 aa21.35■■□□□ 1.01
SSBP4-210ENST00000601444 HMGA1P17096 107 aaKnown RBP21.35■■□□□ 1.01
SSBP4-210ENST00000601444 GRIK1P39086 918 aa21.35■■□□□ 1.01
SSBP4-210ENST00000601444 MAGEA11P43364 429 aa21.35■■□□□ 1.01
SSBP4-210ENST00000601444 RPL10AP62906 217 aaKnown RBP21.35■■□□□ 1.01
SSBP4-210ENST00000601444 GAREM2Q75VX8 874 aa21.35■■□□□ 1.01
SSBP4-210ENST00000601444 ITIH5Q86UX2 942 aa21.35■■□□□ 1.01
SSBP4-210ENST00000601444 ARHGEF19Q8IW93 802 aa21.35■■□□□ 1.01
SSBP4-210ENST00000601444 FUKQ8N0W3 1084 aa21.35■■□□□ 1.01
SSBP4-210ENST00000601444 SHKBP1Q8TBC3 707 aa21.35■■□□□ 1.01
SSBP4-210ENST00000601444 FAXDC2Q96IV6 333 aa21.35■■□□□ 1.01
SSBP4-210ENST00000601444 ZSWIM3Q96MP5 696 aa21.35■■□□□ 1.01
SSBP4-210ENST00000601444 CRACR2AQ9BSW2 395 aa21.35■■□□□ 1.01
SSBP4-210ENST00000601444 NT5C1AQ9BXI3 368 aa21.35■■□□□ 1.01
SSBP4-210ENST00000601444 SMOC2Q9H3U7 446 aa21.35■■□□□ 1.01
SSBP4-210ENST00000601444 FAM49BQ9NUQ9 324 aa21.35■■□□□ 1.01
SSBP4-210ENST00000601444 MAGED2Q9UNF1 606 aaPredicted RBP21.35■■□□□ 1.01
SSBP4-210ENST00000601444 SLC38A8A6NNN8 435 aa21.34■■□□□ 1.01
SSBP4-210ENST00000601444 KCNJ18B7U540 433 aa21.34■■□□□ 1.01
SSBP4-210ENST00000601444 ZNF197O14709 1029 aa21.34■■□□□ 1.01
SSBP4-210ENST00000601444 CETN1Q12798 172 aa21.34■■□□□ 1.01
SSBP4-210ENST00000601444 KCNJ12Q14500 433 aa21.34■■□□□ 1.01
SSBP4-210ENST00000601444 TEAD2Q15562 447 aa21.34■■□□□ 1.01
SSBP4-210ENST00000601444 VSTM1Q6UX27 236 aa21.34■■□□□ 1.01
SSBP4-210ENST00000601444 RRAGAQ7L523 313 aa21.34■■□□□ 1.01
SSBP4-210ENST00000601444 FAM114A1Q8IWE2 563 aa21.34■■□□□ 1.01
SSBP4-210ENST00000601444 SLC2A14Q8TDB8 520 aa21.34■■□□□ 1.01
SSBP4-210ENST00000601444 NT5C1BQ96P26 610 aa21.34■■□□□ 1.01
SSBP4-210ENST00000601444 MED10Q9BTT4 135 aa21.34■■□□□ 1.01
SSBP4-210ENST00000601444 INTS2Q9H0H0 1204 aaKnown RBP21.34■■□□□ 1.01
SSBP4-210ENST00000601444 EPHX3Q9H6B9 360 aa21.34■■□□□ 1.01
SSBP4-210ENST00000601444 KCNK12Q9HB15 430 aa21.34■■□□□ 1.01
SSBP4-210ENST00000601444 IL21Q9HBE4 155 aa21.34■■□□□ 1.01
SSBP4-210ENST00000601444 FANCLQ9NW38 375 aa21.34■■□□□ 1.01
SSBP4-210ENST00000601444 F8VP50 259 aa21.33■■□□□ 1.01
SSBP4-210ENST00000601444 GABRR2P28476 465 aa21.33■■□□□ 1.01
SSBP4-210ENST00000601444 RAD23BP54727 409 aa21.33■■□□□ 1.01
SSBP4-210ENST00000601444 APBA1Q02410 837 aa21.33■■□□□ 1.01
SSBP4-210ENST00000601444 TAF12Q16514 161 aa21.33■■□□□ 1.01
SSBP4-210ENST00000601444 ANO6Q4KMQ2 910 aa21.33■■□□□ 1.01
SSBP4-210ENST00000601444 TCP11X2Q5H9J9 407 aa21.33■■□□□ 1.01
SSBP4-210ENST00000601444 MIIPQ5JXC2 388 aa21.33■■□□□ 1.01
SSBP4-210ENST00000601444 STXBP5Q5T5C0 1151 aa21.33■■□□□ 1.01
SSBP4-210ENST00000601444 PHLDB3Q6NSJ2 640 aa21.33■■□□□ 1.01
SSBP4-210ENST00000601444 PARM1Q6UWI2 310 aa21.33■■□□□ 1.01
SSBP4-210ENST00000601444 FAM35AQ86V20 835 aa21.33■■□□□ 1.01
SSBP4-210ENST00000601444 PPM1KQ8N3J5 372 aa21.33■■□□□ 1.01
SSBP4-210ENST00000601444 UBR7Q8N806 425 aa21.33■■□□□ 1.01
SSBP4-210ENST00000601444 SLC4A11Q8NBS3 891 aa21.33■■□□□ 1.01
SSBP4-210ENST00000601444 KCNK16Q96T55 309 aa21.33■■□□□ 1.01
SSBP4-210ENST00000601444 TUBGCP2Q9BSJ2 902 aa21.33■■□□□ 1.01
SSBP4-210ENST00000601444 RPP25Q9BUL9 199 aaKnown RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms