RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 FAM81BQ96LP2 452 aa27.43■■□□□ 1.98
TRIM28-204ENST00000594806 NECAB3Q96P71 396 aaPredicted RBP27.43■■□□□ 1.98
TRIM28-204ENST00000594806 BPIFA3Q9BQP9 254 aa27.43■■□□□ 1.98
TRIM28-204ENST00000594806 TUBGCP2Q9BSJ2 902 aa27.43■■□□□ 1.98
TRIM28-204ENST00000594806 ELOVL4Q9GZR5 314 aa27.43■■□□□ 1.98
TRIM28-204ENST00000594806 SAMSN1Q9NSI8 373 aaKnown RBP27.43■■□□□ 1.98
TRIM28-204ENST00000594806 HCFC1R1Q9NWW0 138 aa27.43■■□□□ 1.98
TRIM28-204ENST00000594806 DOCK8Q8NF50 2099 aa27.43■■□□□ 1.98
TRIM28-204ENST00000594806 ATF6P18850 670 aa27.42■■□□□ 1.98
TRIM28-204ENST00000594806 PDZD4Q76G19 769 aaPredicted RBP27.42■■□□□ 1.98
TRIM28-204ENST00000594806 DNAJB7Q7Z6W7 309 aaPredicted RBP27.42■■□□□ 1.98
TRIM28-204ENST00000594806 FAM200AQ8TCP9 573 aa27.42■■□□□ 1.98
TRIM28-204ENST00000594806 CISHQ9NSE2 258 aa27.42■■□□□ 1.98
TRIM28-204ENST00000594806 MRPS23Q9Y3D9 190 aaKnown RBP27.42■■□□□ 1.98
TRIM28-204ENST00000594806 TTC28Q96AY4 2481 aa27.42■■□□□ 1.98
TRIM28-204ENST00000594806 C2CD4DB7Z1M9 353 aa27.41■■□□□ 1.98
TRIM28-204ENST00000594806 TRIM66O15016 1216 aa27.41■■□□□ 1.98
TRIM28-204ENST00000594806 CSH1P0DML2 217 aa27.41■■□□□ 1.98
TRIM28-204ENST00000594806 CSH2P0DML3 217 aa27.41■■□□□ 1.98
TRIM28-204ENST00000594806 NTHL1P78549 312 aa27.41■■□□□ 1.98
TRIM28-204ENST00000594806 TAF12Q16514 161 aa27.41■■□□□ 1.98
TRIM28-204ENST00000594806 VWA3BQ502W6 1294 aa27.41■■□□□ 1.98
TRIM28-204ENST00000594806 CDKAL1Q5VV42 579 aa27.41■■□□□ 1.98
TRIM28-204ENST00000594806 SMYD5Q6GMV2 418 aa27.41■■□□□ 1.98
TRIM28-204ENST00000594806 GBP6Q6ZN66 633 aa27.41■■□□□ 1.98
TRIM28-204ENST00000594806 ACOT1Q86TX2 421 aa27.41■■□□□ 1.98
TRIM28-204ENST00000594806 NDST4Q9H3R1 872 aa27.41■■□□□ 1.98
TRIM28-204ENST00000594806 EPS15L1Q9UBC2 864 aa27.41■■□□□ 1.98
TRIM28-204ENST00000594806 SOAT2O75908 522 aa27.4■■□□□ 1.98
TRIM28-204ENST00000594806 CD58P19256 250 aa27.4■■□□□ 1.98
TRIM28-204ENST00000594806 BDNFP23560 247 aa27.4■■□□□ 1.98
TRIM28-204ENST00000594806 GBP2P32456 591 aaPredicted RBP27.4■■□□□ 1.98
TRIM28-204ENST00000594806 GCNT1Q02742 428 aa27.4■■□□□ 1.98
TRIM28-204ENST00000594806 ANO6Q4KMQ2 910 aa27.4■■□□□ 1.98
TRIM28-204ENST00000594806 PRSS36Q5K4E3 855 aa27.4■■□□□ 1.98
TRIM28-204ENST00000594806 GET4Q7L5D6 327 aaPredicted RBP27.4■■□□□ 1.98
TRIM28-204ENST00000594806 WHAMMQ8TF30 809 aa27.4■■□□□ 1.98
TRIM28-204ENST00000594806 JAKMIP2Q96AA8 810 aa27.4■■□□□ 1.98
TRIM28-204ENST00000594806 SPATA17Q96L03 361 aa27.4■■□□□ 1.98
TRIM28-204ENST00000594806 FUCA2Q9BTY2 467 aa27.4■■□□□ 1.98
TRIM28-204ENST00000594806 LRRC3Q9BY71 257 aa27.4■■□□□ 1.98
TRIM28-204ENST00000594806 B3GNT5Q9BYG0 378 aa27.4■■□□□ 1.98
TRIM28-204ENST00000594806 GCNT4Q9P109 453 aa27.4■■□□□ 1.98
TRIM28-204ENST00000594806 CDH7Q9ULB5 785 aa27.4■■□□□ 1.98
TRIM28-204ENST00000594806 TPM2P07951 284 aa27.39■■□□□ 1.98
TRIM28-204ENST00000594806 ANXA13P27216 316 aa27.39■■□□□ 1.98
TRIM28-204ENST00000594806 GRIK1P39086 918 aa27.39■■□□□ 1.98
TRIM28-204ENST00000594806 LRMPQ12912 555 aa27.39■■□□□ 1.98
TRIM28-204ENST00000594806 CCDC142Q17RM4 750 aa27.39■■□□□ 1.98
TRIM28-204ENST00000594806 ANKRD20A12PQ8NF67 263 aa27.39■■□□□ 1.98
TRIM28-204ENST00000594806 C8orf48Q96LL4 319 aa27.39■■□□□ 1.98
TRIM28-204ENST00000594806 LPIN3Q9BQK8 851 aa27.39■■□□□ 1.98
TRIM28-204ENST00000594806 INTS2Q9H0H0 1204 aaKnown RBP27.39■■□□□ 1.98
TRIM28-204ENST00000594806 FANCLQ9NW38 375 aa27.39■■□□□ 1.98
TRIM28-204ENST00000594806 GDE1Q9NZC3 331 aa27.39■■□□□ 1.98
TRIM28-204ENST00000594806 EHD2Q9NZN4 543 aa27.39■■□□□ 1.98
TRIM28-204ENST00000594806 HMGXB4Q9UGU5 601 aa27.39■■□□□ 1.98
TRIM28-204ENST00000594806 SMTNL1A8MU46 457 aa27.38■■□□□ 1.97
TRIM28-204ENST00000594806 EXOC3L4Q17RC7 722 aa27.38■■□□□ 1.97
TRIM28-204ENST00000594806 ENOSF1Q7L5Y1 443 aa27.38■■□□□ 1.97
TRIM28-204ENST00000594806 TMC8Q8IU68 726 aa27.38■■□□□ 1.97
TRIM28-204ENST00000594806 SCN4BQ8IWT1 228 aa27.38■■□□□ 1.97
TRIM28-204ENST00000594806 PPM1KQ8N3J5 372 aa27.38■■□□□ 1.97
TRIM28-204ENST00000594806 FGF13Q92913 245 aa27.38■■□□□ 1.97
TRIM28-204ENST00000594806 NXPE3Q969Y0 559 aa27.38■■□□□ 1.97
TRIM28-204ENST00000594806 SMARCD1Q96GM5 515 aa27.38■■□□□ 1.97
TRIM28-204ENST00000594806 TMEM176AQ96HP8 235 aa27.38■■□□□ 1.97
TRIM28-204ENST00000594806 MYADMQ96S97 322 aa27.38■■□□□ 1.97
TRIM28-204ENST00000594806 ARID3AQ99856 593 aa27.38■■□□□ 1.97
TRIM28-204ENST00000594806 MED10Q9BTT4 135 aa27.38■■□□□ 1.97
TRIM28-204ENST00000594806 GPR88Q9GZN0 384 aa27.38■■□□□ 1.97
TRIM28-204ENST00000594806 CD320Q9NPF0 282 aa27.38■■□□□ 1.97
TRIM28-204ENST00000594806 UXTQ9UBK9 157 aaPredicted RBP27.38■■□□□ 1.97
TRIM28-204ENST00000594806 MYO10Q9HD67 2058 aa27.37■■□□□ 1.97
TRIM28-204ENST00000594806 SYCE3A1L190 88 aa27.37■■□□□ 1.97
TRIM28-204ENST00000594806 TNFRSF10AO00220 468 aa27.37■■□□□ 1.97
TRIM28-204ENST00000594806 CAVIN2O95810 425 aa27.37■■□□□ 1.97
TRIM28-204ENST00000594806 LAMP2P13473 410 aa27.37■■□□□ 1.97
TRIM28-204ENST00000594806 SP100P23497 879 aaPredicted RBP27.37■■□□□ 1.97
TRIM28-204ENST00000594806 CDR1P51861 262 aa27.37■■□□□ 1.97
TRIM28-204ENST00000594806 DDR2Q16832 855 aa27.37■■□□□ 1.97
TRIM28-204ENST00000594806 HSP90AA4PQ58FG1 418 aa27.37■■□□□ 1.97
TRIM28-204ENST00000594806 MIIPQ5JXC2 388 aa27.37■■□□□ 1.97
TRIM28-204ENST00000594806 TRIM65Q6PJ69 517 aa27.37■■□□□ 1.97
TRIM28-204ENST00000594806 HS6ST3Q8IZP7 471 aa27.37■■□□□ 1.97
TRIM28-204ENST00000594806 ITFG1Q8TB96 612 aa27.37■■□□□ 1.97
TRIM28-204ENST00000594806 GIPC2Q8TF65 315 aa27.37■■□□□ 1.97
TRIM28-204ENST00000594806 TRMT2BQ96GJ1 504 aaKnown RBP27.37■■□□□ 1.97
TRIM28-204ENST00000594806 MYRFLQ96LU7 910 aa27.37■■□□□ 1.97
TRIM28-204ENST00000594806 TWNKQ96RR1 684 aa27.37■■□□□ 1.97
TRIM28-204ENST00000594806 HNRNPABQ99729 332 aaKnown RBP27.37■■□□□ 1.97
TRIM28-204ENST00000594806 ZMYM5Q9UJ78 669 aa27.37■■□□□ 1.97
TRIM28-204ENST00000594806 MYH10P35580 1976 aa27.37■■□□□ 1.97
TRIM28-204ENST00000594806 NOL4O94818 638 aa27.36■■□□□ 1.97
TRIM28-204ENST00000594806 MYL4P12829 197 aa27.36■■□□□ 1.97
TRIM28-204ENST00000594806 CDC25CP30307 473 aa27.36■■□□□ 1.97
TRIM28-204ENST00000594806 SLC5A9Q2M3M2 681 aa27.36■■□□□ 1.97
TRIM28-204ENST00000594806 FAM35AQ86V20 835 aa27.36■■□□□ 1.97
TRIM28-204ENST00000594806 RNF135Q8IUD6 432 aa27.36■■□□□ 1.97
TRIM28-204ENST00000594806 FUKQ8N0W3 1084 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms