RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 RNF216Q9NWF9 866 aaPredicted RBP12.06□□□□□ -0.48
SMAD4-205ENST00000588745 DDX43Q9NXZ2 648 aaKnown RBP12.06□□□□□ -0.48
SMAD4-205ENST00000588745 WDR35Q9P2L0 1181 aa12.06□□□□□ -0.48
SMAD4-205ENST00000588745 RNF14Q9UBS8 474 aa12.06□□□□□ -0.48
SMAD4-205ENST00000588745 TJP2Q9UDY2 1190 aa12.06□□□□□ -0.48
SMAD4-205ENST00000588745 LCMT1Q9UIC8 334 aa12.06□□□□□ -0.48
SMAD4-205ENST00000588745 DSEQ9UL01 958 aa12.06□□□□□ -0.48
SMAD4-205ENST00000588745 LTBP2Q14767 1821 aa12.06□□□□□ -0.48
SMAD4-205ENST00000588745 TTC3P53804 2025 aa12.06□□□□□ -0.48
SMAD4-205ENST00000588745 I3L4J1 428 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 MYO1FO00160 1098 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 PDE2AO00408 941 aaPredicted RBP12.05□□□□□ -0.48
SMAD4-205ENST00000588745 SPOPO43791 374 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 PROSCO94903 275 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 GJB6O95452 261 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 CYP11A1P05108 521 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 ACAT1P24752 427 aaKnown RBP12.05□□□□□ -0.48
SMAD4-205ENST00000588745 ADORA2BP29275 332 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 BST2Q10589 180 aaKnown RBP12.05□□□□□ -0.48
SMAD4-205ENST00000588745 CCDC181Q5TID7 509 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 CNKSR3Q6P9H4 555 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 ZNF572Q7Z3I7 529 aaPredicted RBP12.05□□□□□ -0.48
SMAD4-205ENST00000588745 DEFB128Q7Z7B8 93 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 XYLT1Q86Y38 959 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 CRIPAKQ8N1N5 446 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 ANKRD52Q8NB46 1076 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 SLC2A14Q8TDB8 520 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 HASPINQ8TF76 798 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 RSPH1Q8WYR4 309 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 CD101Q93033 1021 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 SUSD3Q96L08 255 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 CASD1Q96PB1 797 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 MCEEQ96PE7 176 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 FAM193BQ96PV7 902 aaPredicted RBP12.05□□□□□ -0.48
SMAD4-205ENST00000588745 SYT15Q9BQS2 421 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 SELENOOQ9BVL4 669 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 MRPL9Q9BYD2 267 aaKnown RBP12.05□□□□□ -0.48
SMAD4-205ENST00000588745 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.05□□□□□ -0.48
SMAD4-205ENST00000588745 TIMM13Q9Y5L4 95 aaPredicted RBP12.05□□□□□ -0.48
SMAD4-205ENST00000588745 V9GYY5 206 aaPredicted RBP12.05□□□□□ -0.48
SMAD4-205ENST00000588745 CCDC66A2RUB6 948 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 TMEM191CA6NGB0 347 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 GOLGA8SH3BPF8 625 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 CAPN15O75808 1086 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 ITGB1P05556 798 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 PTPN1P18031 435 aaKnown RBP12.05□□□□□ -0.48
SMAD4-205ENST00000588745 TYMPP19971 482 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 CTNNA2P26232 953 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 PCSK1P29120 753 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 TKTP29401 623 aaKnown RBP12.05□□□□□ -0.48
SMAD4-205ENST00000588745 MAN1A1P33908 653 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 CTNNA1P35221 906 aaKnown RBP12.05□□□□□ -0.48
SMAD4-205ENST00000588745 SLC1A1P43005 524 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 PAFAH1B1P43034 410 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 OR1G1P47890 313 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 GATMP50440 423 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 PDE4CQ08493 712 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 ZNF268Q14587 947 aaPredicted RBP12.05□□□□□ -0.48
SMAD4-205ENST00000588745 CFAP221Q4G0U5 840 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 MDH1BQ5I0G3 518 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 TEX35Q5T0J7 233 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 KIAA0319Q5VV43 1072 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 DCUN1D2Q6PH85 259 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 RSRC2Q7L4I2 434 aaKnown RBP12.05□□□□□ -0.48
SMAD4-205ENST00000588745 METTL23Q86XA0 190 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 CPNE8Q86YQ8 564 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 FUKQ8N0W3 1084 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 UBL4BQ8N7F7 174 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 STK32AQ8WU08 396 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 SLC35F5Q8WV83 523 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 MCRS1Q96EZ8 462 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 HNRNPABQ99729 332 aaKnown RBP12.05□□□□□ -0.48
SMAD4-205ENST00000588745 SLC4A5Q9BY07 1137 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 CARD9Q9H257 536 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 CRTAC1Q9NQ79 661 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 ST7Q9NRC1 585 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 EHD2Q9NZN4 543 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 IP6K2Q9UHH9 426 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 CDH9Q9ULB4 789 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 PCDHB8Q9UN66 801 aa12.05□□□□□ -0.48
SMAD4-205ENST00000588745 FNDC1Q4ZHG4 1894 aaPredicted RBP12.04□□□□□ -0.48
SMAD4-205ENST00000588745 SIGLEC16A6NMB1 481 aa12.04□□□□□ -0.48
SMAD4-205ENST00000588745 E5RJQ4 531 aa12.04□□□□□ -0.48
SMAD4-205ENST00000588745 F8W810 466 aa12.04□□□□□ -0.48
SMAD4-205ENST00000588745 TULP2O00295 520 aa12.04□□□□□ -0.48
SMAD4-205ENST00000588745 DYNC1I1O14576 645 aa12.04□□□□□ -0.48
SMAD4-205ENST00000588745 ATP2C2O75185 946 aa12.04□□□□□ -0.48
SMAD4-205ENST00000588745 PLA2G4AP47712 749 aa12.04□□□□□ -0.48
SMAD4-205ENST00000588745 MARCKSL1P49006 195 aa12.04□□□□□ -0.48
SMAD4-205ENST00000588745 RGS7P49802 495 aa12.04□□□□□ -0.48
SMAD4-205ENST00000588745 RPL7AP62424 266 aaKnown RBP12.04□□□□□ -0.48
SMAD4-205ENST00000588745 ITIH3Q06033 890 aa12.04□□□□□ -0.48
SMAD4-205ENST00000588745 IKBKEQ14164 716 aa12.04□□□□□ -0.48
SMAD4-205ENST00000588745 CCDC142Q17RM4 750 aa12.04□□□□□ -0.48
SMAD4-205ENST00000588745 ERCC6LQ2NKX8 1250 aa12.04□□□□□ -0.48
SMAD4-205ENST00000588745 FAM102AQ5T9C2 384 aaPredicted RBP12.04□□□□□ -0.48
SMAD4-205ENST00000588745 DCAF12L1Q5VU92 463 aa12.04□□□□□ -0.48
SMAD4-205ENST00000588745 PMF1Q6P1K2 205 aa12.04□□□□□ -0.48
SMAD4-205ENST00000588745 LRRC43Q8N309 656 aa12.04□□□□□ -0.48
SMAD4-205ENST00000588745 RASGEF1CQ8N431 466 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms