RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 HOXD12P35452 270 aa13.74□□□□□ -0.21
DNMT1-207ENST00000586588 ERFP50548 548 aa13.74□□□□□ -0.21
DNMT1-207ENST00000586588 TLR1Q15399 786 aa13.74□□□□□ -0.21
DNMT1-207ENST00000586588 GRAMD4Q6IC98 578 aa13.74□□□□□ -0.21
DNMT1-207ENST00000586588 PATL1Q86TB9 770 aaKnown RBP13.74□□□□□ -0.21
DNMT1-207ENST00000586588 ZNF410Q86VK4 478 aa13.74□□□□□ -0.21
DNMT1-207ENST00000586588 ERI1Q8IV48 349 aaKnown RBP13.74□□□□□ -0.21
DNMT1-207ENST00000586588 SLF2Q8IX21 1173 aa13.74□□□□□ -0.21
DNMT1-207ENST00000586588 FAM81BQ96LP2 452 aa13.74□□□□□ -0.21
DNMT1-207ENST00000586588 NARFQ9UHQ1 456 aa13.74□□□□□ -0.21
DNMT1-207ENST00000586588 SNED1Q8TER0 1413 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 LPXNO60711 386 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 NR1H2P55055 460 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 NCKAP1LP55160 1127 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 COG7P83436 770 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 KRT81Q14533 505 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 TRIP10Q15642 601 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 OGFRL1Q5TC84 451 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-207ENST00000586588 MOXD1Q6UVY6 613 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 NSMFQ6X4W1 530 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 PRPF39Q86UA1 669 aaKnown RBP13.73□□□□□ -0.21
DNMT1-207ENST00000586588 SLC9A9Q8IVB4 645 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 CCDC24Q8N4L8 307 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 ARHGEF1Q92888 912 aaKnown RBP13.73□□□□□ -0.21
DNMT1-207ENST00000586588 MRRFQ96E11 262 aaKnown RBP13.73□□□□□ -0.21
DNMT1-207ENST00000586588 ABHD8Q96I13 439 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 PFDN4Q9NQP4 134 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 RAB26Q9ULW5 256 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 SHOC2Q9UQ13 582 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 PPME1Q9Y570 386 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 SPDYE16A6NNV3 312 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-207ENST00000586588 MEIS1O00470 390 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 BGNP21810 368 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 GPX6P59796 221 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 APOFQ13790 326 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 CCNIQ14094 377 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 MYBPC2Q14324 1141 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 HSF5Q4G112 596 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-207ENST00000586588 DRICH1Q6PGQ1 229 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-207ENST00000586588 PACS1Q6VY07 963 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 SLC15A3Q8IY34 581 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 SLC26A7Q8TE54 656 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 PRPF31Q8WWY3 499 aaKnown RBP13.73□□□□□ -0.21
DNMT1-207ENST00000586588 VPS50Q96JG6 964 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 NLRP4Q96MN2 994 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 BIRC8Q96P09 236 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 PAFAH2Q99487 392 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 ACSS3Q9H6R3 686 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 PLGRKTQ9HBL7 147 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 ALG13Q9NP73 1137 aaKnown RBP13.73□□□□□ -0.21
DNMT1-207ENST00000586588 AGPAT3Q9NRZ7 376 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 ANAPC7Q9UJX3 599 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 MAD1L1Q9Y6D9 718 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 ARFGEF1Q9Y6D6 1849 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 UBR3Q6ZT12 1888 aa13.73□□□□□ -0.21
DNMT1-207ENST00000586588 BOLA2-SMG1P6H3BVE0 249 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 IPO5O00410 1097 aaKnown RBP13.72□□□□□ -0.21
DNMT1-207ENST00000586588 CDH2P19022 906 aaPredicted RBP13.72□□□□□ -0.21
DNMT1-207ENST00000586588 FUT4P22083 530 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 ACAD10Q6JQN1 1059 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 SPIRE2Q8WWL2 714 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 GRIP2Q9C0E4 1043 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 ZNF652Q9Y2D9 606 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 TNRC6CQ9HCJ0 1690 aaKnown RBP13.72□□□□□ -0.21
DNMT1-207ENST00000586588 TBX3O15119 743 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 SERPINA6P08185 405 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 ALOX15P16050 662 aaPredicted RBP13.72□□□□□ -0.21
DNMT1-207ENST00000586588 AOC1P19801 751 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 PMLP29590 882 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 HIRAP54198 1017 aaPredicted RBP13.72□□□□□ -0.21
DNMT1-207ENST00000586588 BTKQ06187 659 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 EPC2Q52LR7 807 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 PGM2L1Q6PCE3 622 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 C16orf86Q6ZW13 317 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 STXBP4Q6ZWJ1 553 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 APOPT1Q96IL0 206 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 HEMGNQ9BXL5 484 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 ADAM33Q9BZ11 813 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 C12orf65Q9H3J6 166 aaKnown RBP13.72□□□□□ -0.21
DNMT1-207ENST00000586588 SAP30BPQ9UHR5 308 aaKnown RBP13.72□□□□□ -0.21
DNMT1-207ENST00000586588 FAF1Q9UNN5 650 aaPredicted RBP13.72□□□□□ -0.21
DNMT1-207ENST00000586588 DTNAQ9Y4J8 743 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 CEPT1Q9Y6K0 416 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 DNAJA2O60884 412 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 CDK8P49336 464 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 CYP2J2P51589 502 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 SLC18A2Q05940 514 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 COG2Q14746 738 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 HP1BP3Q5SSJ5 553 aaPredicted RBP13.72□□□□□ -0.21
DNMT1-207ENST00000586588 FAM196AQ6ZSG2 479 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 CAPN12Q6ZSI9 719 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 DZIP1Q86YF9 867 aaKnown RBP13.72□□□□□ -0.21
DNMT1-207ENST00000586588 ATP11CQ8NB49 1132 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 DCAKDQ8WVC6 231 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 AGAP3Q96P47 875 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 HNRNPABQ99729 332 aaKnown RBP13.72□□□□□ -0.21
DNMT1-207ENST00000586588 GLT8D2Q9H1C3 349 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 BHMT2Q9H2M3 363 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 IKZF4Q9H2S9 585 aa13.72□□□□□ -0.21
DNMT1-207ENST00000586588 AVENQ9NQS1 362 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms