RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 MCRS1Q96EZ8 462 aa16.89■□□□□ 0.29
RABGGTA-206ENST00000558649 FUBP3Q96I24 572 aaKnown RBP eCLIP16.89■□□□□ 0.29
RABGGTA-206ENST00000558649 TNIP3Q96KP6 325 aa16.89■□□□□ 0.29
RABGGTA-206ENST00000558649 THAP9Q9H5L6 903 aa16.89■□□□□ 0.29
RABGGTA-206ENST00000558649 ZNF334Q9HCZ1 680 aaPredicted RBP16.89■□□□□ 0.29
RABGGTA-206ENST00000558649 CDH7Q9ULB5 785 aa16.89■□□□□ 0.29
RABGGTA-206ENST00000558649 COQ4Q9Y3A0 265 aa16.89■□□□□ 0.29
RABGGTA-206ENST00000558649 NRG2O14511 850 aaPredicted RBP16.88■□□□□ 0.29
RABGGTA-206ENST00000558649 ZNF197O14709 1029 aa16.88■□□□□ 0.29
RABGGTA-206ENST00000558649 LAMP2P13473 410 aa16.88■□□□□ 0.29
RABGGTA-206ENST00000558649 CCDC130P13994 396 aa16.88■□□□□ 0.29
RABGGTA-206ENST00000558649 GRIK1P39086 918 aa16.88■□□□□ 0.29
RABGGTA-206ENST00000558649 RPL10AP62906 217 aaKnown RBP16.88■□□□□ 0.29
RABGGTA-206ENST00000558649 MTMR3Q13615 1198 aa16.88■□□□□ 0.29
RABGGTA-206ENST00000558649 ZNF394Q53GI3 561 aa16.88■□□□□ 0.29
RABGGTA-206ENST00000558649 PRSS36Q5K4E3 855 aa16.88■□□□□ 0.29
RABGGTA-206ENST00000558649 TMC8Q8IU68 726 aa16.88■□□□□ 0.29
RABGGTA-206ENST00000558649 IRF2BP1Q8IU81 584 aa16.88■□□□□ 0.29
RABGGTA-206ENST00000558649 FAM114A1Q8IWE2 563 aa16.88■□□□□ 0.29
RABGGTA-206ENST00000558649 NPAS3Q8IXF0 933 aa16.88■□□□□ 0.29
RABGGTA-206ENST00000558649 TWNKQ96RR1 684 aa16.88■□□□□ 0.29
RABGGTA-206ENST00000558649 B3GNT5Q9BYG0 378 aa16.88■□□□□ 0.29
RABGGTA-206ENST00000558649 ZNF518BQ9C0D4 1074 aa16.88■□□□□ 0.29
RABGGTA-206ENST00000558649 CYP3A43Q9HB55 503 aa16.88■□□□□ 0.29
RABGGTA-206ENST00000558649 FAM49BQ9NUQ9 324 aa16.88■□□□□ 0.29
RABGGTA-206ENST00000558649 ANO10Q9NW15 660 aa16.88■□□□□ 0.29
RABGGTA-206ENST00000558649 ASB3Q9Y575 518 aa16.88■□□□□ 0.29
RABGGTA-206ENST00000558649 DOCK8Q8NF50 2099 aa16.88■□□□□ 0.29
RABGGTA-206ENST00000558649 A0A0C4DFX4 3053 aa16.88■□□□□ 0.29
RABGGTA-206ENST00000558649 A0A1W2PRU2 124 aa16.87■□□□□ 0.29
RABGGTA-206ENST00000558649 DCXO43602 365 aa16.87■□□□□ 0.29
RABGGTA-206ENST00000558649 TRIM21P19474 475 aaKnown RBP16.87■□□□□ 0.29
RABGGTA-206ENST00000558649 ANXA13P27216 316 aa16.87■□□□□ 0.29
RABGGTA-206ENST00000558649 INCA1Q0VD86 236 aa16.87■□□□□ 0.29
RABGGTA-206ENST00000558649 TEAD2Q15562 447 aa16.87■□□□□ 0.29
RABGGTA-206ENST00000558649 UNC93AQ86WB7 457 aa16.87■□□□□ 0.29
RABGGTA-206ENST00000558649 LEMD2Q8NC56 503 aa16.87■□□□□ 0.29
RABGGTA-206ENST00000558649 RSAD2Q8WXG1 361 aa16.87■□□□□ 0.29
RABGGTA-206ENST00000558649 NT5C1BQ96P26 610 aa16.87■□□□□ 0.29
RABGGTA-206ENST00000558649 NT5C1AQ9BXI3 368 aa16.87■□□□□ 0.29
RABGGTA-206ENST00000558649 SLITRK6Q9H5Y7 841 aa16.87■□□□□ 0.29
RABGGTA-206ENST00000558649 AVENQ9NQS1 362 aaPredicted RBP16.87■□□□□ 0.29
RABGGTA-206ENST00000558649 CISHQ9NSE2 258 aa16.87■□□□□ 0.29
RABGGTA-206ENST00000558649 SAMSN1Q9NSI8 373 aaKnown RBP16.87■□□□□ 0.29
RABGGTA-206ENST00000558649 EPS15L1Q9UBC2 864 aa16.87■□□□□ 0.29
RABGGTA-206ENST00000558649 ATP8B3O60423 1300 aa16.87■□□□□ 0.29
RABGGTA-206ENST00000558649 OBSL1O75147 1896 aa16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 PES1O00541 588 aaKnown RBP16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 CILPO75339 1184 aa16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 PRKCSHP14314 528 aaPredicted RBP16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 GABRR2P28476 465 aa16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 ADORA2BP29275 332 aa16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 MAGEA11P43364 429 aa16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 CACNA2D1P54289 1103 aa16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 EPHA5P54756 1037 aa16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 TYRO3Q06418 890 aa16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 CUL2Q13617 745 aa16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 PTPN21Q16825 1174 aa16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 VSTM1Q6UX27 236 aa16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 FAM35AQ86V20 835 aa16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 PPM1KQ8N3J5 372 aa16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 C12orf29Q8N999 325 aa16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 SHKBP1Q8TBC3 707 aa16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 GCNAQ96QF7 691 aa16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 LRRC3Q9BY71 257 aa16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 ELOVL4Q9GZR5 314 aa16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 INTS2Q9H0H0 1204 aaKnown RBP16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 ATXN3LQ9H3M9 355 aa16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 SMOC2Q9H3U7 446 aa16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 EPHX3Q9H6B9 360 aa16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 KCNK12Q9HB15 430 aa16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 KRT82Q9NSB4 513 aa16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 GCNT4Q9P109 453 aa16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 NFE2L3Q9Y4A8 694 aa16.86■□□□□ 0.29
RABGGTA-206ENST00000558649 SLC38A8A6NNN8 435 aa16.85■□□□□ 0.29
RABGGTA-206ENST00000558649 KCNJ18B7U540 433 aa16.85■□□□□ 0.29
RABGGTA-206ENST00000558649 F8VP50 259 aa16.85■□□□□ 0.29
RABGGTA-206ENST00000558649 TRIM66O15016 1216 aa16.85■□□□□ 0.29
RABGGTA-206ENST00000558649 P4HA2O15460 535 aa16.85■□□□□ 0.29
RABGGTA-206ENST00000558649 MOSPD3O75425 235 aa16.85■□□□□ 0.29
RABGGTA-206ENST00000558649 CSH1P0DML2 217 aa16.85■□□□□ 0.29
RABGGTA-206ENST00000558649 CSH2P0DML3 217 aa16.85■□□□□ 0.29
RABGGTA-206ENST00000558649 PTMSP20962 102 aa16.85■□□□□ 0.29
RABGGTA-206ENST00000558649 CYP4F8P98187 520 aa16.85■□□□□ 0.29
RABGGTA-206ENST00000558649 IFRD2Q12894 506 aaPredicted RBP16.85■□□□□ 0.29
RABGGTA-206ENST00000558649 KCNJ12Q14500 433 aa16.85■□□□□ 0.29
RABGGTA-206ENST00000558649 KLHL40Q2TBA0 621 aa16.85■□□□□ 0.29
RABGGTA-206ENST00000558649 CT47A1Q5JQC4 288 aaPredicted RBP16.85■□□□□ 0.29
RABGGTA-206ENST00000558649 STXBP5Q5T5C0 1151 aa16.85■□□□□ 0.29
RABGGTA-206ENST00000558649 PARM1Q6UWI2 310 aa16.85■□□□□ 0.29
RABGGTA-206ENST00000558649 GAREM2Q75VX8 874 aa16.85■□□□□ 0.29
RABGGTA-206ENST00000558649 SLC2A14Q8TDB8 520 aa16.85■□□□□ 0.29
RABGGTA-206ENST00000558649 WHAMMQ8TF30 809 aa16.85■□□□□ 0.29
RABGGTA-206ENST00000558649 KXD1Q9BQD3 176 aa16.85■□□□□ 0.29
RABGGTA-206ENST00000558649 CRACR2AQ9BSW2 395 aa16.85■□□□□ 0.29
RABGGTA-206ENST00000558649 DNAI2Q9GZS0 605 aa16.85■□□□□ 0.29
RABGGTA-206ENST00000558649 TMEM30AQ9NV96 361 aa16.85■□□□□ 0.29
RABGGTA-206ENST00000558649 SORCS3Q9UPU3 1222 aa16.85■□□□□ 0.29
RABGGTA-206ENST00000558649 ZFP37Q9Y6Q3 630 aaPredicted RBP16.85■□□□□ 0.29
RABGGTA-206ENST00000558649 NUMBLQ9Y6R0 609 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms