RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 PPP1R26Q5T8A7 1209 aaPredicted RBP11.51□□□□□ -0.57
PABPN1-203ENST00000553960 SCARA5Q6ZMJ2 495 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 PAQR9Q6ZVX9 377 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 POLNQ7Z5Q5 900 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 OSTM1Q86WC4 334 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 TTC30AQ86WT1 665 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 METTL23Q86XA0 190 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 ABI1Q8IZP0 508 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 FUKQ8N0W3 1084 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 CEP112Q8N8E3 955 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 OR6B3Q8NGW1 331 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 FEZF2Q8TBJ5 459 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 ZNF564Q8TBZ8 553 aaPredicted RBP11.51□□□□□ -0.57
PABPN1-203ENST00000553960 PHOSPHO2Q8TCD6 241 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 ACTRT1Q8TDG2 376 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 ZNF653Q96CK0 615 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 RTP3Q9BQQ7 232 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 PDCL3Q9H2J4 239 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 NRDE2Q9H7Z3 1164 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 ATP11BQ9Y2G3 1177 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 PATJQ8NI35 1801 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 OR6C75A6NL08 312 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 MYO1FO00160 1098 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 DPYSL4O14531 572 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 SART1O43290 800 aaKnown RBP11.5□□□□□ -0.57
PABPN1-203ENST00000553960 POMCP01189 267 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 TUBBP07437 444 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 GALTP07902 379 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 CD19P15391 556 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 RRM1P23921 792 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 LMO2P25791 158 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 CTNNA1P35221 906 aaKnown RBP11.5□□□□□ -0.57
PABPN1-203ENST00000553960 MAGEA11P43364 429 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 PEX5P50542 639 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 SLC8A3P57103 927 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 PPP2R5EQ16537 467 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 NFE2Q16621 373 aaPredicted RBP11.5□□□□□ -0.57
PABPN1-203ENST00000553960 INTS6LQ5JSJ4 861 aaKnown RBP11.5□□□□□ -0.57
PABPN1-203ENST00000553960 DENND1BQ6P3S1 775 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 SLC26A9Q7LBE3 791 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 ACOT1Q86TX2 421 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 XYLT1Q86Y38 959 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 ZNF280BQ86YH2 543 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 CREG2Q8IUH2 290 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 THEM5Q8N1Q8 247 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 MNS1Q8NEH6 495 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 IPO4Q8TEX9 1081 aaKnown RBP11.5□□□□□ -0.57
PABPN1-203ENST00000553960 C2orf15Q8WU43 125 aaKnown RBP11.5□□□□□ -0.57
PABPN1-203ENST00000553960 CPA5Q8WXQ8 436 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 RUBCNQ92622 972 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 ELMO3Q96BJ8 720 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 CPXM1Q96SM3 734 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 PAAF1Q9BRP4 392 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 NUP85Q9BW27 656 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 OSGEPQ9NPF4 335 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.5□□□□□ -0.571e-10■■■□□ 15
PABPN1-203ENST00000553960 COMMD8Q9NX08 183 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 IL37Q9NZH6 218 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 CTTNBP2NLQ9P2B4 639 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 IP6K2Q9UHH9 426 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 CYTH4Q9UIA0 394 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 TMEM59LQ9UK28 342 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 ADAM28Q9UKQ2 775 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 AMFRQ9UKV5 643 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 LRFN2Q9ULH4 789 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 EFR3BQ9Y2G0 817 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 PCDHA3Q9Y5H8 950 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 ALG6Q9Y672 507 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 NLRC5Q86WI3 1866 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 VWA8A3KMH1 1905 aa11.5□□□□□ -0.57
PABPN1-203ENST00000553960 EFCAB8A8MWE9 144 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 ZNF487B1APH4 448 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 NRP1O14786 923 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 PSTPIP1O43586 416 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 B4GALT3O60512 393 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 FBXO21O94952 628 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 AMHP03971 560 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 ATP1A1P05023 1023 aaKnown RBP11.49□□□□□ -0.57
PABPN1-203ENST00000553960 RAG1P15918 1043 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 NPR3P17342 541 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 ABCB4P21439 1286 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 PTPN7P35236 360 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 PCK1P35558 622 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 CKAP4Q07065 602 aaKnown RBP11.49□□□□□ -0.57
PABPN1-203ENST00000553960 RPS6KA1Q15418 735 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 ZNF394Q53GI3 561 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 RASIP1Q5U651 963 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 OVOS1Q6IE37 1185 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 VSTM1Q6UX27 236 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 DSTYKQ6XUX3 929 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 MMS22LQ6ZRQ5 1243 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 PEX26Q7Z412 305 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 BNIPLQ7Z465 357 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 DAAM2Q86T65 1068 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 ZNF276Q8N554 614 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 IRGQQ8WZA9 623 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 NT5C3BQ969T7 300 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 SCLYQ96I15 445 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 OSBPL9Q96SU4 736 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 SYT15Q9BQS2 421 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms