RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 SEMA4GQ9NTN9 838 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 BLOC1S4Q9NUP1 217 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 ABI2Q9NYB9 513 aaPredicted RBP7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 TBX20Q9UMR3 447 aa7.41□□□□□ -1.22
PRPF40B-214ENST00000551320 SPEGQ15772 3267 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 CYB561D2O14569 222 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 HNRNPDLO14979 420 aaKnown RBP7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 NCAM2O15394 837 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 ATP2C2O75185 946 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 FAM13AO94988 1023 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 TOP3BO95985 862 aaKnown RBP7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 GJB2P29033 226 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 LRPAP1P30533 357 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 ALDH1A3P47895 512 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 EPHB3P54753 998 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 EPHA5P54756 1037 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 NCKAP1LP55160 1127 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 ATP2C1P98194 919 aaPredicted RBP7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 CEBPZQ03701 1054 aaKnown RBP7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 PPP2R3AQ06190 1150 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 GPR17Q13304 367 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 EML3Q32P44 896 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 C8orf34Q49A92 452 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 FSTL4Q6MZW2 842 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 APBB1IPQ7Z5R6 666 aaPredicted RBP7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 OSTM1Q86WC4 334 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 BEST2Q8NFU1 509 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 EZH1Q92800 747 aaPredicted RBP7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 DNASE1L2Q92874 299 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 HPS3Q969F9 1004 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 SAAL1Q96ER3 474 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 EPSTI1Q96J88 318 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 CDK5RAP3Q96JB5 506 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 CLIC6Q96NY7 704 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 FIZ1Q96SL8 496 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 NELL2Q99435 816 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 RPF1Q9H9Y2 349 aaKnown RBP7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 HPS4Q9NQG7 708 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 GMEB2Q9UKD1 530 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 RAB23Q9ULC3 237 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 MRPS17Q9Y2R5 130 aaKnown RBP7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 RBM19Q9Y4C8 960 aaKnown RBP7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 WASF2Q9Y6W5 498 aa7.4□□□□□ -1.22
PRPF40B-214ENST00000551320 RALGAPA1Q6GYQ0 2036 aa7.4□□□□□ -1.23
PRPF40B-214ENST00000551320 DSPP15924 2871 aaKnown RBP7.4□□□□□ -1.23
PRPF40B-214ENST00000551320 NBEAQ8NFP9 2946 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 GON4LQ3T8J9 2241 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 A0A0B4J269 797 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 MYBPHLA2RUH7 354 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 J3QL48 77 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 MAN2B1O00754 1011 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 GIPC1O14908 333 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 OGTO15294 1046 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 LZTS3O60299 673 aaPredicted RBP7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 KRT18P05783 430 aaKnown RBP7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 MUTP22033 750 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 CYP2F1P24903 491 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 ADSSP30520 456 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 TRAPPC10P48553 1259 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 AARSP49588 968 aaKnown RBP eCLIP7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 CASP5P51878 434 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 SMTNP53814 917 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 SEC13P55735 322 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 HMGN5P82970 282 aaKnown RBP7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 PRR20EP86478 221 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 PRR20CP86479 221 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 PRR20DP86480 221 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 PRR20BP86481 221 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 PRR20AP86496 221 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 FCHO2Q0JRZ9 810 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 MESP2Q0VG99 397 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 TMEM132DQ14C87 1099 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 N4BP2L1Q5TBK1 243 aaPredicted RBP7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 SPATA1Q5VX52 437 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 CRELD2Q6UXH1 353 aaPredicted RBP7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 PRR23CQ6ZRP0 262 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 SFR1Q86XK3 245 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 CCDC116Q8IYX3 515 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 SPEM1Q8N4L4 309 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 FRMD1Q8N878 549 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 GLIS3Q8NEA6 775 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 USP13Q92995 863 aaPredicted RBP7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 PSMG2Q969U7 264 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 TMX3Q96JJ7 454 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 CHAMP1Q96JM3 812 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 FAM213AQ9BRX8 229 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 NTPCRQ9BSD7 190 aaKnown RBP7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 LINC00597Q9H2U6 94 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 PCIF1Q9H4Z3 704 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 VRTNQ9H8Y1 702 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 TRPV4Q9HBA0 871 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 TRPC7Q9HCX4 862 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 TMPRSS4Q9NRS4 437 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 TOR4AQ9NXH8 423 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 DPP3Q9NY33 737 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 CPSF3Q9UKF6 684 aaKnown RBP7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 UBQLN1Q9UMX0 589 aaKnown RBP7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 CLIC4Q9Y696 253 aa7.39□□□□□ -1.23
PRPF40B-214ENST00000551320 WNT6Q9Y6F9 365 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms