RNA–Protein interactions for RNA: ENST00000544691.6

SDR39U1-203, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best)

Gene SDR39U1, Length 1,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-203ENST00000544691 C12orf29Q8N999 325 aa20.58■□□□□ 0.89
SDR39U1-203ENST00000544691 FUBP3Q96I24 572 aaKnown RBP eCLIP20.58■□□□□ 0.89
SDR39U1-203ENST00000544691 CORO1BQ9BR76 489 aa20.58■□□□□ 0.89
SDR39U1-203ENST00000544691 ELOVL4Q9GZR5 314 aa20.58■□□□□ 0.89
SDR39U1-203ENST00000544691 PRKAG3Q9UGI9 489 aa20.58■□□□□ 0.89
SDR39U1-203ENST00000544691 NOTCH4Q99466 2003 aa20.58■□□□□ 0.88
SDR39U1-203ENST00000544691 CLDN5O00501 218 aa20.58■□□□□ 0.88
SDR39U1-203ENST00000544691 RHOP08100 348 aa20.58■□□□□ 0.88
SDR39U1-203ENST00000544691 SLC9A1P19634 815 aa20.58■□□□□ 0.88
SDR39U1-203ENST00000544691 EPHB3P54753 998 aa20.58■□□□□ 0.88
SDR39U1-203ENST00000544691 DDR2Q16832 855 aa20.58■□□□□ 0.88
SDR39U1-203ENST00000544691 SLC5A9Q2M3M2 681 aa20.58■□□□□ 0.88
SDR39U1-203ENST00000544691 PABPC1LQ4VXU2 614 aaKnown RBP20.58■□□□□ 0.88
SDR39U1-203ENST00000544691 PHLDB3Q6NSJ2 640 aa20.58■□□□□ 0.88
SDR39U1-203ENST00000544691 TRIM65Q6PJ69 517 aa20.58■□□□□ 0.88
SDR39U1-203ENST00000544691 RRAGAQ7L523 313 aa20.58■□□□□ 0.88
SDR39U1-203ENST00000544691 HS6ST3Q8IZP7 471 aa20.58■□□□□ 0.88
SDR39U1-203ENST00000544691 CRYBG2Q8N1P7 616 aa20.58■□□□□ 0.88
SDR39U1-203ENST00000544691 GIPC2Q8TF65 315 aa20.58■□□□□ 0.88
SDR39U1-203ENST00000544691 ZNF512Q96ME7 567 aaPredicted RBP20.58■□□□□ 0.88
SDR39U1-203ENST00000544691 UHRF1Q96T88 793 aaPredicted RBP20.58■□□□□ 0.88
SDR39U1-203ENST00000544691 BPIFA3Q9BQP9 254 aa20.58■□□□□ 0.88
SDR39U1-203ENST00000544691 NT5C1AQ9BXI3 368 aa20.58■□□□□ 0.88
SDR39U1-203ENST00000544691 B3GNT5Q9BYG0 378 aa20.58■□□□□ 0.88
SDR39U1-203ENST00000544691 ZNF518BQ9C0D4 1074 aa20.58■□□□□ 0.88
SDR39U1-203ENST00000544691 CD320Q9NPF0 282 aa20.58■□□□□ 0.88
SDR39U1-203ENST00000544691 FAM49BQ9NUQ9 324 aa20.58■□□□□ 0.88
SDR39U1-203ENST00000544691 TMEM30AQ9NV96 361 aa20.58■□□□□ 0.88
SDR39U1-203ENST00000544691 PES1O00541 588 aaKnown RBP20.57■□□□□ 0.88
SDR39U1-203ENST00000544691 NRG2O14511 850 aaPredicted RBP20.57■□□□□ 0.88
SDR39U1-203ENST00000544691 CCDC130P13994 396 aa20.57■□□□□ 0.88
SDR39U1-203ENST00000544691 ZNF18P17022 549 aa20.57■□□□□ 0.88
SDR39U1-203ENST00000544691 PTPN2P17706 415 aa20.57■□□□□ 0.88
SDR39U1-203ENST00000544691 CACNA2D1P54289 1103 aa20.57■□□□□ 0.88
SDR39U1-203ENST00000544691 PLD1Q13393 1074 aa20.57■□□□□ 0.88
SDR39U1-203ENST00000544691 GBP6Q6ZN66 633 aa20.57■□□□□ 0.88
SDR39U1-203ENST00000544691 GET4Q7L5D6 327 aaPredicted RBP20.57■□□□□ 0.88
SDR39U1-203ENST00000544691 ELMOD1Q8N336 334 aa20.57■□□□□ 0.88
SDR39U1-203ENST00000544691 PTPRDP23468 1912 aa20.56■□□□□ 0.88
SDR39U1-203ENST00000544691 GTPBP10A4D1E9 387 aaKnown RBP20.56■□□□□ 0.88
SDR39U1-203ENST00000544691 C2CD4DB7Z1M9 353 aa20.56■□□□□ 0.88
SDR39U1-203ENST00000544691 ATP1A3P13637 1013 aa20.56■□□□□ 0.88
SDR39U1-203ENST00000544691 TBXAS1P24557 533 aaPredicted RBP20.56■□□□□ 0.88
SDR39U1-203ENST00000544691 CCR2P41597 374 aa20.56■□□□□ 0.88
SDR39U1-203ENST00000544691 EXOC3L4Q17RC7 722 aa20.56■□□□□ 0.88
SDR39U1-203ENST00000544691 IQCEQ6IPM2 695 aa20.56■□□□□ 0.88
SDR39U1-203ENST00000544691 PAQR9Q6ZVX9 377 aa20.56■□□□□ 0.88
SDR39U1-203ENST00000544691 SCN4BQ8IWT1 228 aa20.56■□□□□ 0.88
SDR39U1-203ENST00000544691 FUKQ8N0W3 1084 aa20.56■□□□□ 0.88
SDR39U1-203ENST00000544691 UBR7Q8N806 425 aa20.56■□□□□ 0.88
SDR39U1-203ENST00000544691 ITFG1Q8TB96 612 aa20.56■□□□□ 0.88
SDR39U1-203ENST00000544691 FAM200AQ8TCP9 573 aa20.56■□□□□ 0.88
SDR39U1-203ENST00000544691 PSMG2Q969U7 264 aa20.56■□□□□ 0.88
SDR39U1-203ENST00000544691 TCEAL4Q96EI5 215 aa20.56■□□□□ 0.88
SDR39U1-203ENST00000544691 VPS16Q9H269 839 aa20.56■□□□□ 0.88
SDR39U1-203ENST00000544691 NCOR1O75376 2440 aa20.55■□□□□ 0.88
SDR39U1-203ENST00000544691 C19orf67A6NJJ6 358 aa20.55■□□□□ 0.88
SDR39U1-203ENST00000544691 LOC730098B7Z3J9 87 aa20.55■□□□□ 0.88
SDR39U1-203ENST00000544691 FSHRP23945 695 aa20.55■□□□□ 0.88
SDR39U1-203ENST00000544691 PON1P27169 355 aa20.55■□□□□ 0.88
SDR39U1-203ENST00000544691 RAD23BP54727 409 aa20.55■□□□□ 0.88
SDR39U1-203ENST00000544691 MTMR3Q13615 1198 aa20.55■□□□□ 0.88
SDR39U1-203ENST00000544691 IQCB1Q15051 598 aa20.55■□□□□ 0.88
SDR39U1-203ENST00000544691 GJB7Q6PEY0 223 aa20.55■□□□□ 0.88
SDR39U1-203ENST00000544691 DNAJB7Q7Z6W7 309 aaPredicted RBP20.55■□□□□ 0.88
SDR39U1-203ENST00000544691 FAM35AQ86V20 835 aa20.55■□□□□ 0.88
SDR39U1-203ENST00000544691 TMC8Q8IU68 726 aa20.55■□□□□ 0.88
SDR39U1-203ENST00000544691 SLC4A11Q8NBS3 891 aa20.55■□□□□ 0.88
SDR39U1-203ENST00000544691 SLC2A14Q8TDB8 520 aa20.55■□□□□ 0.88
SDR39U1-203ENST00000544691 ING5Q8WYH8 240 aa20.55■□□□□ 0.88
SDR39U1-203ENST00000544691 KREMEN1Q96MU8 473 aa20.55■□□□□ 0.88
SDR39U1-203ENST00000544691 MYADMQ96S97 322 aa20.55■□□□□ 0.88
SDR39U1-203ENST00000544691 COL25A1Q9BXS0 654 aaPredicted RBP20.55■□□□□ 0.88
SDR39U1-203ENST00000544691 LRRC3Q9BY71 257 aa20.55■□□□□ 0.88
SDR39U1-203ENST00000544691 ZNF334Q9HCZ1 680 aaPredicted RBP20.55■□□□□ 0.88
SDR39U1-203ENST00000544691 ACO1P21399 889 aaKnown RBP20.54■□□□□ 0.88
SDR39U1-203ENST00000544691 GRIK1P39086 918 aa20.54■□□□□ 0.88
SDR39U1-203ENST00000544691 MAGEA11P43364 429 aa20.54■□□□□ 0.88
SDR39U1-203ENST00000544691 GCNT1Q02742 428 aa20.54■□□□□ 0.88
SDR39U1-203ENST00000544691 VEPH1Q14D04 833 aa20.54■□□□□ 0.88
SDR39U1-203ENST00000544691 PRSS36Q5K4E3 855 aa20.54■□□□□ 0.88
SDR39U1-203ENST00000544691 VSTM1Q6UX27 236 aa20.54■□□□□ 0.88
SDR39U1-203ENST00000544691 MED10Q9BTT4 135 aa20.54■□□□□ 0.88
SDR39U1-203ENST00000544691 ASAH2Q9NR71 780 aa20.54■□□□□ 0.88
SDR39U1-203ENST00000544691 USTQ9Y2C2 406 aa20.54■□□□□ 0.88
SDR39U1-203ENST00000544691 F8VP50 259 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 MYL4P12829 197 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 GJA1P17302 382 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 SSTR3P32745 418 aaPredicted RBP20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 EPHA5P54756 1037 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 RPL10AP62906 217 aaKnown RBP20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 KCNMA1Q12791 1236 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 POTEHQ6S545 545 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 PDZD4Q76G19 769 aaPredicted RBP20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 APTXQ7Z2E3 356 aaKnown RBP20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 GJD3Q8N144 294 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 TTC39CQ8N584 583 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 TDRD5Q8NAT2 981 aaKnown RBP20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 TMEM176AQ96HP8 235 aa20.53■□□□□ 0.88
SDR39U1-203ENST00000544691 FAM124BQ9H5Z6 455 aaPredicted RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms