RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 F5P12259 2224 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 CACNA1IQ9P0X4 2223 aa10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 KIF26AQ9ULI4 1882 aaPredicted RBP10.42□□□□□ -0.74
TNFRSF1A-214ENST00000543048 TICRRQ7Z2Z1 1910 aa10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 A0A1W2PRU2 124 aa10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 MYBPHLA2RUH7 354 aa10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 LRRIQ3A6PVS8 624 aaPredicted RBP10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 NRG2O14511 850 aaPredicted RBP10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ATP2C2O75185 946 aa10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 TACC1O75410 805 aa10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 CYP2F1P24903 491 aa10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 GABRR2P28476 465 aa10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 PLA2G5P39877 138 aa10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 TNNC1P63316 161 aa10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 BIRC3Q13489 604 aa10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 MAPRE1Q15691 268 aaKnown RBP10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 SGSM1Q2NKQ1 1148 aa10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 SLC44A4Q53GD3 710 aa10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ARHGAP15Q53QZ3 475 aa10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 PHLDB3Q6NSJ2 640 aa10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 C4orf50Q6ZRC1 276 aa10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 GAREM2Q75VX8 874 aa10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 SPATA2LQ8IUW3 424 aaPredicted RBP10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 SPNS2Q8IVW8 549 aa10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ELOA2Q8IYF1 753 aaPredicted RBP10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ZSCAN18Q8TBC5 510 aaPredicted RBP10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 KBTBD7Q8WVZ9 684 aa10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 E2F7Q96AV8 911 aa10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 FUBP3Q96I24 572 aaKnown RBP eCLIP10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 SHDQ96IW2 340 aa10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 LPIN3Q9BQK8 851 aa10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ZNF334Q9HCZ1 680 aaPredicted RBP10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 NXF1Q9UBU9 619 aaKnown RBP10.41□□□□□ -0.74
TNFRSF1A-214ENST00000543048 HCRTO43612 131 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 PI15O43692 258 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 CSH1P0DML2 217 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 CSH2P0DML3 217 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 KRT13P13646 458 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 PSMC3P17980 439 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ATF6P18850 670 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 AOC1P19801 751 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 RFX1P22670 979 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 FCARP24071 287 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 NR2F2P24468 414 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 CDC25CP30307 473 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 PSMC2P35998 433 aaKnown RBP10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 VIPR2P41587 438 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 MAGEA11P43364 429 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 VAMP7P51809 220 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 STARD6P59095 220 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 MCCD1P59942 119 aaPredicted RBP10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 DLG4P78352 724 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ENPEPQ07075 957 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 NCOA4Q13772 614 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 DDR2Q16832 855 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 EDRF1Q3B7T1 1238 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ZACNQ401N2 412 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 CFAP221Q4G0U5 840 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ZNF667Q5HYK9 610 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ZNF658Q5TYW1 1059 aaPredicted RBP10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 TDRD10Q5VZ19 366 aaKnown RBP10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 INTS8Q75QN2 995 aaKnown RBP10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 SV2AQ7L0J3 742 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 MFSD6LQ8IWD5 586 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 TMEM105Q8N8V8 129 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 OR6B3Q8NGW1 331 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 SPATA20Q8TB22 786 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 MYCBPAPQ8TBZ2 947 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 TAF4BQ92750 862 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 SMARCE1Q969G3 411 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 SYT15Q9BQS2 421 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 MRPL45Q9BRJ2 306 aaKnown RBP10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 TRMT61BQ9BVS5 477 aaKnown RBP10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 XYLT2Q9H1B5 865 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 IRF2BPLQ9H1B7 796 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 SLITRK6Q9H5Y7 841 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 TASP1Q9H6P5 420 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 VRTNQ9H8Y1 702 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 CRTAC1Q9NQ79 661 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ZMYM5Q9UJ78 669 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 PCDHA5Q9Y5H7 936 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 CACNA1HO95180 2353 aa10.4□□□□□ -0.74
TNFRSF1A-214ENST00000543048 ATG2BQ96BY7 2078 aa10.39□□□□□ -0.75
TNFRSF1A-214ENST00000543048 SOBPA7XYQ1 873 aa10.39□□□□□ -0.75
TNFRSF1A-214ENST00000543048 A8MXQ7 604 aa10.39□□□□□ -0.75
TNFRSF1A-214ENST00000543048 CETN3O15182 167 aa10.39□□□□□ -0.75
TNFRSF1A-214ENST00000543048 AKAP3O75969 853 aa10.39□□□□□ -0.75
TNFRSF1A-214ENST00000543048 VNN1O95497 513 aa10.39□□□□□ -0.75
TNFRSF1A-214ENST00000543048 F11P03951 625 aa10.39□□□□□ -0.75
TNFRSF1A-214ENST00000543048 P4HA1P13674 534 aa10.39□□□□□ -0.75
TNFRSF1A-214ENST00000543048 HMGA1P17096 107 aaKnown RBP10.39□□□□□ -0.75
TNFRSF1A-214ENST00000543048 PTPN1P18031 435 aaKnown RBP10.39□□□□□ -0.75
TNFRSF1A-214ENST00000543048 WEE1P30291 646 aa10.39□□□□□ -0.75
TNFRSF1A-214ENST00000543048 PRCPP42785 496 aa10.39□□□□□ -0.75
TNFRSF1A-214ENST00000543048 GPR15P49685 360 aa10.39□□□□□ -0.75
TNFRSF1A-214ENST00000543048 PTPN5P54829 565 aa10.39□□□□□ -0.75
TNFRSF1A-214ENST00000543048 PRKCQQ04759 706 aa10.39□□□□□ -0.75
TNFRSF1A-214ENST00000543048 ZNF699Q32M78 642 aa10.39□□□□□ -0.75
TNFRSF1A-214ENST00000543048 COBLL1Q53SF7 1204 aa10.39□□□□□ -0.75
TNFRSF1A-214ENST00000543048 C1orf220Q5T0J3 134 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms