RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 KIAA1257Q9ULG3 409 aa18.87■□□□□ 0.61
GNE-204ENST00000539208 TPX2Q9ULW0 747 aaKnown RBP18.87■□□□□ 0.61
GNE-204ENST00000539208 A0A1B0GUA9 196 aa18.86■□□□□ 0.61
GNE-204ENST00000539208 PDHXO00330 501 aa18.86■□□□□ 0.61
GNE-204ENST00000539208 TSPAN1O60635 241 aa18.86■□□□□ 0.61
GNE-204ENST00000539208 MICAL2O94851 1124 aa18.86■□□□□ 0.61
GNE-204ENST00000539208 ERBB2P04626 1255 aa18.86■□□□□ 0.61
GNE-204ENST00000539208 CETPP11597 493 aa18.86■□□□□ 0.61
GNE-204ENST00000539208 GPD2P43304 727 aa18.86■□□□□ 0.61
GNE-204ENST00000539208 GCLCP48506 637 aaPredicted RBP18.86■□□□□ 0.61
GNE-204ENST00000539208 ARSEP51690 589 aa18.86■□□□□ 0.61
GNE-204ENST00000539208 RBP5P82980 135 aa18.86■□□□□ 0.61
GNE-204ENST00000539208 MORF4L2Q15014 288 aa18.86■□□□□ 0.61
GNE-204ENST00000539208 CCDC142Q17RM4 750 aa18.86■□□□□ 0.61
GNE-204ENST00000539208 TTC13Q8NBP0 860 aa18.86■□□□□ 0.61
GNE-204ENST00000539208 ARHGEF2Q92974 986 aaKnown RBP18.86■□□□□ 0.61
GNE-204ENST00000539208 PWWP2AQ96N64 755 aa18.86■□□□□ 0.61
GNE-204ENST00000539208 ACAP3Q96P50 834 aa18.86■□□□□ 0.61
GNE-204ENST00000539208 RBM15Q96T37 977 aaKnown RBP eCLIP18.86■□□□□ 0.61
GNE-204ENST00000539208 HMGXB4Q9UGU5 601 aa18.86■□□□□ 0.61
GNE-204ENST00000539208 BARX2Q9UMQ3 279 aaPredicted RBP18.86■□□□□ 0.61
GNE-204ENST00000539208 SNAI1O95863 264 aaPredicted RBP18.86■□□□□ 0.61
GNE-204ENST00000539208 ZNF286BP0CG31 522 aa18.86■□□□□ 0.61
GNE-204ENST00000539208 ADCYAP1R1P41586 468 aa18.86■□□□□ 0.61
GNE-204ENST00000539208 MAGEA4P43358 317 aa18.86■□□□□ 0.61
GNE-204ENST00000539208 ZNF410Q86VK4 478 aa18.86■□□□□ 0.61
GNE-204ENST00000539208 KIAA0319LQ8IZA0 1049 aa18.86■□□□□ 0.61
GNE-204ENST00000539208 GLIS1Q8NBF1 620 aa18.86■□□□□ 0.61
GNE-204ENST00000539208 SYNCQ9H7C4 482 aa18.86■□□□□ 0.61
GNE-204ENST00000539208 PCDH9Q9HC56 1237 aa18.86■□□□□ 0.61
GNE-204ENST00000539208 DNAJC17Q9NVM6 304 aaKnown RBP18.86■□□□□ 0.61
GNE-204ENST00000539208 AGAP1Q9UPQ3 857 aa18.86■□□□□ 0.61
GNE-204ENST00000539208 KDELR1P24390 212 aa18.85■□□□□ 0.61
GNE-204ENST00000539208 IL1R2P27930 398 aa18.85■□□□□ 0.61
GNE-204ENST00000539208 SLC20A2Q08357 652 aa18.85■□□□□ 0.61
GNE-204ENST00000539208 MARCH8Q5T0T0 291 aa18.85■□□□□ 0.61
GNE-204ENST00000539208 BBS12Q6ZW61 710 aa18.85■□□□□ 0.61
GNE-204ENST00000539208 PRUNE1Q86TP1 453 aa18.85■□□□□ 0.61
GNE-204ENST00000539208 CACNA2D3Q8IZS8 1091 aa18.85■□□□□ 0.61
GNE-204ENST00000539208 NLRP7Q8WX94 980 aa18.85■□□□□ 0.61
GNE-204ENST00000539208 MS4A4AQ96JQ5 239 aa18.85■□□□□ 0.61
GNE-204ENST00000539208 TTC25Q96NG3 672 aa18.85■□□□□ 0.61
GNE-204ENST00000539208 METTL5Q9NRN9 209 aaKnown RBP18.85■□□□□ 0.61
GNE-204ENST00000539208 CDH16O75309 829 aa18.85■□□□□ 0.61
GNE-204ENST00000539208 GPS1Q13098 491 aa18.85■□□□□ 0.61
GNE-204ENST00000539208 IFT88Q13099 833 aa18.85■□□□□ 0.61
GNE-204ENST00000539208 RIBC1Q8N443 379 aaPredicted RBP18.85■□□□□ 0.61
GNE-204ENST00000539208 CMASQ8NFW8 434 aaPredicted RBP18.85■□□□□ 0.61
GNE-204ENST00000539208 UPF1Q92900 1129 aaKnown RBP eCLIP18.85■□□□□ 0.61
GNE-204ENST00000539208 ACSF2Q96CM8 615 aaPredicted RBP18.85■□□□□ 0.61
GNE-204ENST00000539208 ADPGKQ9BRR6 497 aa18.85■□□□□ 0.61
GNE-204ENST00000539208 DPP3Q9NY33 737 aa18.85■□□□□ 0.61
GNE-204ENST00000539208 FSBPO95073 299 aa18.84■□□□□ 0.61
GNE-204ENST00000539208 ITGBL1O95965 494 aaPredicted RBP18.84■□□□□ 0.61
GNE-204ENST00000539208 GRM5P41594 1212 aa18.84■□□□□ 0.61
GNE-204ENST00000539208 GTF2A2P52657 109 aa18.84■□□□□ 0.61
GNE-204ENST00000539208 MYO1EQ12965 1108 aa18.84■□□□□ 0.61
GNE-204ENST00000539208 ORC1Q13415 861 aa18.84■□□□□ 0.61
GNE-204ENST00000539208 GRIK4Q16099 956 aa18.84■□□□□ 0.61
GNE-204ENST00000539208 DUSP28Q4G0W2 176 aa18.84■□□□□ 0.61
GNE-204ENST00000539208 CCDC38Q502W7 563 aa18.84■□□□□ 0.61
GNE-204ENST00000539208 RNASEH2BQ5TBB1 312 aaKnown RBP18.84■□□□□ 0.61
GNE-204ENST00000539208 CABS1Q96KC9 395 aa18.84■□□□□ 0.61
GNE-204ENST00000539208 HEXIM2Q96MH2 286 aaKnown RBP18.84■□□□□ 0.61
GNE-204ENST00000539208 CFAP57Q96MR6 1250 aa18.84■□□□□ 0.61
GNE-204ENST00000539208 PPP1R16BQ96T49 567 aa18.84■□□□□ 0.61
GNE-204ENST00000539208 SYT17Q9BSW7 474 aa18.84■□□□□ 0.61
GNE-204ENST00000539208 MIS12Q9H081 205 aa18.84■□□□□ 0.61
GNE-204ENST00000539208 ZWILCHQ9H900 591 aa18.84■□□□□ 0.61
GNE-204ENST00000539208 EURLQ9NYK6 297 aa18.84■□□□□ 0.61
GNE-204ENST00000539208 SHOC2Q9UQ13 582 aa18.84■□□□□ 0.61
GNE-204ENST00000539208 ACTL7BQ9Y614 415 aa18.84■□□□□ 0.61
GNE-204ENST00000539208 BTBD19C9JJ37 291 aa18.83■□□□□ 0.61
GNE-204ENST00000539208 M0QYV0 167 aa18.83■□□□□ 0.61
GNE-204ENST00000539208 ZSCAN5DPP0CG00 497 aa18.83■□□□□ 0.61
GNE-204ENST00000539208 PCK1P35558 622 aa18.83■□□□□ 0.61
GNE-204ENST00000539208 LCLAT1Q6UWP7 414 aa18.83■□□□□ 0.61
GNE-204ENST00000539208 PCGF5Q86SE9 256 aa18.83■□□□□ 0.61
GNE-204ENST00000539208 ANKRD23Q86SG2 305 aa18.83■□□□□ 0.61
GNE-204ENST00000539208 TMEM130Q8N3G9 435 aa18.83■□□□□ 0.61
GNE-204ENST00000539208 PRMT1Q99873 361 aaKnown RBP18.83■□□□□ 0.61
GNE-204ENST00000539208 PLEKHA5Q9HAU0 1116 aa18.83■□□□□ 0.61
GNE-204ENST00000539208 DERAQ9Y315 318 aa18.83■□□□□ 0.61
GNE-204ENST00000539208 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.83■□□□□ 0.6
GNE-204ENST00000539208 RNF8O76064 485 aa18.83■□□□□ 0.6
GNE-204ENST00000539208 LIG3P49916 1009 aa18.83■□□□□ 0.6
GNE-204ENST00000539208 PLCB3Q01970 1234 aa18.83■□□□□ 0.6
GNE-204ENST00000539208 STILQ15468 1287 aa18.83■□□□□ 0.6
GNE-204ENST00000539208 DCAF4L1Q3SXM0 396 aa18.83■□□□□ 0.6
GNE-204ENST00000539208 MAP1SQ66K74 1059 aaPredicted RBP18.83■□□□□ 0.6
GNE-204ENST00000539208 VSTM1Q6UX27 236 aa18.83■□□□□ 0.6
GNE-204ENST00000539208 PIGWQ7Z7B1 504 aa18.83■□□□□ 0.6
GNE-204ENST00000539208 EMC1Q8N766 993 aa18.83■□□□□ 0.6
GNE-204ENST00000539208 P3H4Q92791 437 aa18.83■□□□□ 0.6
GNE-204ENST00000539208 C9orf72Q96LT7 481 aa18.83■□□□□ 0.6
GNE-204ENST00000539208 PHACTR1Q9C0D0 580 aa18.83■□□□□ 0.6
GNE-204ENST00000539208 ASNSD1Q9NWL6 643 aa18.83■□□□□ 0.6
GNE-204ENST00000539208 MMP3P08254 477 aa18.82■□□□□ 0.6
GNE-204ENST00000539208 ETS1P14921 441 aa18.82■□□□□ 0.6
GNE-204ENST00000539208 PECAM1P16284 738 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms