RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 TMEM206Q9H813 350 aa18.94■□□□□ 0.62
PVT1-220ENST00000524165 PLEKHA5Q9HAU0 1116 aa18.94■□□□□ 0.62
PVT1-220ENST00000524165 SNX14Q9Y5W7 946 aa18.94■□□□□ 0.62
PVT1-220ENST00000524165 A0A1W2PQD8 194 aa18.93■□□□□ 0.62
PVT1-220ENST00000524165 ANTXRLA6NF34 631 aa18.93■□□□□ 0.62
PVT1-220ENST00000524165 FAM205CA6NFA0 338 aa18.93■□□□□ 0.62
PVT1-220ENST00000524165 J3QKU1 62 aa18.93■□□□□ 0.62
PVT1-220ENST00000524165 NEMFO60524 1076 aa18.93■□□□□ 0.62
PVT1-220ENST00000524165 CBFA2T3O75081 653 aa18.93■□□□□ 0.62
PVT1-220ENST00000524165 HAPLN1P10915 354 aaPredicted RBP18.93■□□□□ 0.62
PVT1-220ENST00000524165 PAX3P23760 479 aa18.93■□□□□ 0.62
PVT1-220ENST00000524165 ZNF33AQ06730 810 aa18.93■□□□□ 0.62
PVT1-220ENST00000524165 ZBTB6Q15916 424 aa18.93■□□□□ 0.62
PVT1-220ENST00000524165 EFCAB13Q8IY85 973 aa18.93■□□□□ 0.62
PVT1-220ENST00000524165 TMEM130Q8N3G9 435 aa18.93■□□□□ 0.62
PVT1-220ENST00000524165 ALLCQ8N6M5 410 aa18.93■□□□□ 0.62
PVT1-220ENST00000524165 IL17RCQ8NAC3 791 aa18.93■□□□□ 0.62
PVT1-220ENST00000524165 TXNDC5Q8NBS9 432 aaKnown RBP18.93■□□□□ 0.62
PVT1-220ENST00000524165 ZNF274Q96GC6 653 aaPredicted RBP18.93■□□□□ 0.62
PVT1-220ENST00000524165 POLD4Q9HCU8 107 aa18.93■□□□□ 0.62
PVT1-220ENST00000524165 UBQLN1Q9UMX0 589 aaKnown RBP18.93■□□□□ 0.62
PVT1-220ENST00000524165 PTPRQQ9UMZ3 2332 aa18.92■□□□□ 0.62
PVT1-220ENST00000524165 SGK1O00141 431 aa18.92■□□□□ 0.62
PVT1-220ENST00000524165 NFATC1O95644 943 aa18.92■□□□□ 0.62
PVT1-220ENST00000524165 RPA1P27694 616 aa18.92■□□□□ 0.62
PVT1-220ENST00000524165 EOGTQ5NDL2 527 aa18.92■□□□□ 0.62
PVT1-220ENST00000524165 TAS1R3Q7RTX0 852 aa18.92■□□□□ 0.62
PVT1-220ENST00000524165 HMGB4Q8WW32 186 aa18.92■□□□□ 0.62
PVT1-220ENST00000524165 ARHGAP28Q9P2N2 729 aa18.92■□□□□ 0.62
PVT1-220ENST00000524165 PCOLCE2Q9UKZ9 415 aa18.92■□□□□ 0.62
PVT1-220ENST00000524165 TRABD2BA6NFA1 517 aa18.91■□□□□ 0.62
PVT1-220ENST00000524165 CCDC169A6NNP5 214 aa18.91■□□□□ 0.62
PVT1-220ENST00000524165 KLF8O95600 359 aaPredicted RBP18.91■□□□□ 0.62
PVT1-220ENST00000524165 CYP11A1P05108 521 aa18.91■□□□□ 0.62
PVT1-220ENST00000524165 USP17L7P0C7H9 530 aa18.91■□□□□ 0.62
PVT1-220ENST00000524165 CHRM1P11229 460 aaPredicted RBP18.91■□□□□ 0.62
PVT1-220ENST00000524165 HARSP12081 509 aaKnown RBP18.91■□□□□ 0.62
PVT1-220ENST00000524165 TCF3P15923 654 aa18.91■□□□□ 0.62
PVT1-220ENST00000524165 PSMA5P28066 241 aa18.91■□□□□ 0.62
PVT1-220ENST00000524165 NPTX2P47972 431 aa18.91■□□□□ 0.62
PVT1-220ENST00000524165 LILRA4P59901 499 aa18.91■□□□□ 0.62
PVT1-220ENST00000524165 TOB2Q14106 344 aaPredicted RBP18.91■□□□□ 0.62
PVT1-220ENST00000524165 PGBD3Q8N328 593 aa18.91■□□□□ 0.62
PVT1-220ENST00000524165 SENP8Q96LD8 212 aa18.91■□□□□ 0.62
PVT1-220ENST00000524165 RBM19Q9Y4C8 960 aaKnown RBP18.91■□□□□ 0.62
PVT1-220ENST00000524165 TCHHQ07283 1943 aa18.9■□□□□ 0.62
PVT1-220ENST00000524165 TTC26A0AVF1 554 aa18.9■□□□□ 0.62
PVT1-220ENST00000524165 XPOTO43592 962 aaKnown RBP18.9■□□□□ 0.62
PVT1-220ENST00000524165 TOM1L1O75674 476 aa18.9■□□□□ 0.62
PVT1-220ENST00000524165 CSH1P0DML2 217 aa18.9■□□□□ 0.62
PVT1-220ENST00000524165 CSH2P0DML3 217 aa18.9■□□□□ 0.62
PVT1-220ENST00000524165 CXCL8P10145 99 aa18.9■□□□□ 0.62
PVT1-220ENST00000524165 PEX3P56589 373 aa18.9■□□□□ 0.62
PVT1-220ENST00000524165 SPAG1Q07617 926 aa18.9■□□□□ 0.62
PVT1-220ENST00000524165 CAMK2BQ13554 666 aa18.9■□□□□ 0.62
PVT1-220ENST00000524165 NOLC1Q14978 699 aaKnown RBP eCLIP18.9■□□□□ 0.62
PVT1-220ENST00000524165 GAB4Q2WGN9 574 aa18.9■□□□□ 0.62
PVT1-220ENST00000524165 SEZ6Q53EL9 994 aa18.9■□□□□ 0.62
PVT1-220ENST00000524165 GALNT15Q8N3T1 639 aa18.9■□□□□ 0.62
PVT1-220ENST00000524165 PIP4K2CQ8TBX8 421 aa18.9■□□□□ 0.62
PVT1-220ENST00000524165 TNFRSF25Q93038 417 aa18.9■□□□□ 0.62
PVT1-220ENST00000524165 ZBTB45Q96K62 511 aaPredicted RBP18.9■□□□□ 0.62
PVT1-220ENST00000524165 LINC00597Q9H2U6 94 aa18.9■□□□□ 0.62
PVT1-220ENST00000524165 FAM124BQ9H5Z6 455 aaPredicted RBP18.9■□□□□ 0.62
PVT1-220ENST00000524165 PRORYQ9H606 182 aa18.9■□□□□ 0.62
PVT1-220ENST00000524165 GJB4Q9NTQ9 266 aa18.9■□□□□ 0.62
PVT1-220ENST00000524165 UXTQ9UBK9 157 aaPredicted RBP18.9■□□□□ 0.62
PVT1-220ENST00000524165 STK24Q9Y6E0 443 aa18.9■□□□□ 0.62
PVT1-220ENST00000524165 STK36Q9NRP7 1315 aa18.9■□□□□ 0.62
PVT1-220ENST00000524165 KNTC1P50748 2209 aa18.89■□□□□ 0.61
PVT1-220ENST00000524165 COL6A6A6NMZ7 2263 aa18.89■□□□□ 0.61
PVT1-220ENST00000524165 TRAV19A0A0A6YYK7 116 aa18.89■□□□□ 0.61
PVT1-220ENST00000524165 TCRBV21S2A2A0A5A6 115 aa18.89■□□□□ 0.61
PVT1-220ENST00000524165 CAPN8A6NHC0 703 aa18.89■□□□□ 0.61
PVT1-220ENST00000524165 CAPN9O14815 690 aa18.89■□□□□ 0.61
PVT1-220ENST00000524165 DKK1O94907 266 aa18.89■□□□□ 0.61
PVT1-220ENST00000524165 MUTP22033 750 aa18.89■□□□□ 0.61
PVT1-220ENST00000524165 TIE1P35590 1138 aa18.89■□□□□ 0.61
PVT1-220ENST00000524165 NR5A1Q13285 461 aa18.89■□□□□ 0.61
PVT1-220ENST00000524165 PLEKHG6Q3KR16 790 aa18.89■□□□□ 0.61
PVT1-220ENST00000524165 DEFB119Q8N690 84 aa18.89■□□□□ 0.61
PVT1-220ENST00000524165 TTC16Q8NEE8 873 aa18.89■□□□□ 0.61
PVT1-220ENST00000524165 ERMNQ8TAM6 284 aa18.89■□□□□ 0.61
PVT1-220ENST00000524165 CYP2S1Q96SQ9 504 aa18.89■□□□□ 0.61
PVT1-220ENST00000524165 KIF2CQ99661 725 aa18.89■□□□□ 0.61
PVT1-220ENST00000524165 ZDHHC5Q9C0B5 715 aa18.89■□□□□ 0.61
PVT1-220ENST00000524165 SUSD2Q9UGT4 822 aa18.89■□□□□ 0.61
PVT1-220ENST00000524165 DSEQ9UL01 958 aa18.89■□□□□ 0.61
PVT1-220ENST00000524165 SCN1AP35498 2009 aa18.89■□□□□ 0.61
PVT1-220ENST00000524165 A0A0A0MRY4 1105 aa18.88■□□□□ 0.61
PVT1-220ENST00000524165 MYMKA6NI61 221 aa18.88■□□□□ 0.61
PVT1-220ENST00000524165 TADA3O75528 432 aa18.88■□□□□ 0.61
PVT1-220ENST00000524165 CDKL5O76039 1030 aa18.88■□□□□ 0.61
PVT1-220ENST00000524165 CKMP06732 381 aa18.88■□□□□ 0.61
PVT1-220ENST00000524165 KIR2DL1P43626 348 aaPredicted RBP18.88■□□□□ 0.61
PVT1-220ENST00000524165 CDR1P51861 262 aa18.88■□□□□ 0.61
PVT1-220ENST00000524165 LRRTM3Q86VH5 581 aa18.88■□□□□ 0.61
PVT1-220ENST00000524165 LURAP1LQ8IV03 231 aa18.88■□□□□ 0.61
PVT1-220ENST00000524165 SLC41A1Q8IVJ1 513 aa18.88■□□□□ 0.61
PVT1-220ENST00000524165 PDCD7Q8N8D1 485 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms