RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 TRIM15Q9C019 465 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 C6orf62Q9GZU0 229 aaPredicted RBP6.86□□□□□ -1.31
SDC2-208ENST00000523877 FAM192AQ9GZU8 254 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 ABCG8Q9H221 673 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 CCDC87Q9NVE4 849 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 RMND1Q9NWS8 449 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 TOR4AQ9NXH8 423 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 STK32BQ9NY57 414 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 AASSQ9UDR5 926 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 CYTH4Q9UIA0 394 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 DENND2AQ9ULE3 1009 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 HCN4Q9Y3Q4 1203 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 DNMT3AQ9Y6K1 912 aaPredicted RBP6.86□□□□□ -1.31
SDC2-208ENST00000523877 CUX1P39880 1505 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 ASXL2Q76L83 1435 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 YEATS2Q9ULM3 1422 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 DBX1A6NMT0 343 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 A6NNZ2 444 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 FOXP2O15409 715 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 SSX5O60225 188 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 MAN1A2O60476 641 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 TLR2O60603 784 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 GPR37L1O60883 481 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 ADAM11O75078 769 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 PEX11AO75192 247 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 ZPR1O75312 459 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 SLITRK5O94991 958 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 FYNP06241 537 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 CLTBP09497 229 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 GALP22466 123 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 ACSL1P33121 698 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 EIF4A3P38919 411 aaKnown RBP6.85□□□□□ -1.31
SDC2-208ENST00000523877 SLC26A3P40879 764 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 STAT5BP51692 787 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 ADARP55265 1226 aaKnown RBP6.85□□□□□ -1.31
SDC2-208ENST00000523877 SRP54P61011 504 aaKnown RBP6.85□□□□□ -1.31
SDC2-208ENST00000523877 DCAF7P61962 342 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 RALGDSQ12967 914 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 PLD1Q13393 1074 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 CAMK2DQ13557 499 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 RFTN1Q14699 578 aaPredicted RBP6.85□□□□□ -1.31
SDC2-208ENST00000523877 MBTPS1Q14703 1052 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 ARHGAP19Q14CB8 494 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 HERC3Q15034 1050 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 ARHGAP44Q17R89 818 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 RPUSD3Q6P087 351 aaKnown RBP6.85□□□□□ -1.31
SDC2-208ENST00000523877 TRIM72Q6ZMU5 477 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 MEX3BQ6ZN04 569 aaKnown RBP6.85□□□□□ -1.31
SDC2-208ENST00000523877 ANO5Q75V66 913 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 LIMS2Q7Z4I7 341 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 YTHDF3Q7Z739 585 aaKnown RBP6.85□□□□□ -1.31
SDC2-208ENST00000523877 STRA8Q7Z7C7 330 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 ASPGQ86U10 573 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 LONP2Q86WA8 852 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 CCDC25Q86WR0 208 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 CREG2Q8IUH2 290 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 ANKMY2Q8IV38 441 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 CEP97Q8IW35 865 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 MCEMP1Q8IX19 187 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 EFHBQ8N7U6 833 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 ANKFN1Q8N957 763 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 GALNT11Q8NCW6 608 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 PPFIBP2Q8ND30 876 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 C3orf58Q8NDZ4 430 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 TRPV1Q8NER1 839 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 TSPEARQ8WU66 669 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 SCFD1Q8WVM8 642 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 KRT35Q92764 455 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 SYN2Q92777 582 aaPredicted RBP6.85□□□□□ -1.31
SDC2-208ENST00000523877 REXO5Q96IC2 774 aaKnown RBP6.85□□□□□ -1.31
SDC2-208ENST00000523877 LRGUKQ96M69 825 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 PRICKLE1Q96MT3 831 aaPredicted RBP6.85□□□□□ -1.31
SDC2-208ENST00000523877 CAMK1GQ96NX5 476 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 GAS2L1Q99501 681 aaPredicted RBP6.85□□□□□ -1.31
SDC2-208ENST00000523877 PIP5K1AQ99755 562 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 SH3GL2Q99962 352 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 NTMT1Q9BV86 223 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 TTLL2Q9BWV7 592 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 BRIP1Q9BX63 1249 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 STK33Q9BYT3 514 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 ZCCHC2Q9C0B9 1178 aaKnown RBP6.85□□□□□ -1.31
SDC2-208ENST00000523877 EHD4Q9H223 541 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 TMEM206Q9H813 350 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 SPACA1Q9HBV2 294 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 TRPC7Q9HCX4 862 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 SARS2Q9NP81 518 aaKnown RBP6.85□□□□□ -1.31
SDC2-208ENST00000523877 FAM114A2Q9NRY5 505 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 KBTBD4Q9NVX7 518 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 RUVBL1Q9Y265 456 aaKnown RBP6.85□□□□□ -1.31
SDC2-208ENST00000523877 STARD13Q9Y3M8 1113 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 DTNAQ9Y4J8 743 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 CACNG2Q9Y698 323 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 PTCH2Q9Y6C5 1203 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 NUMBLQ9Y6R0 609 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 KIF21BO75037 1637 aa6.85□□□□□ -1.31
SDC2-208ENST00000523877 PLEKHH1Q9ULM0 1364 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 A0A0A6YYJ9 748 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 A0A1B0GVG6 124 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 TYW5A2RUC4 315 aaKnown RBP6.84□□□□□ -1.31
SDC2-208ENST00000523877 PHF20L1A8MW92 1017 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms