RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 SFTPA1Q8IWL2 248 aa15.05■□□□□ -0
NKX3-1-202ENST00000523261 OXER1Q8TDS5 423 aa15.05■□□□□ -0
NKX3-1-202ENST00000523261 MRPS31Q92665 395 aaKnown RBP15.05■□□□□ -0
NKX3-1-202ENST00000523261 HNRNPABQ99729 332 aaKnown RBP15.05■□□□□ -0
NKX3-1-202ENST00000523261 TARS2Q9BW92 718 aaKnown RBP15.05■□□□□ -0
NKX3-1-202ENST00000523261 LINC00597Q9H2U6 94 aa15.05■□□□□ -0
NKX3-1-202ENST00000523261 STK24Q9Y6E0 443 aa15.05■□□□□ -0
NKX3-1-202ENST00000523261 TSC2P49815 1807 aa15.05■□□□□ -0
NKX3-1-202ENST00000523261 PIEZO2Q9H5I5 2752 aa15.04■□□□□ -0
NKX3-1-202ENST00000523261 MUC22E2RYF6 1773 aaPredicted RBP15.04■□□□□ -0
NKX3-1-202ENST00000523261 PHLPP2Q6ZVD8 1323 aa15.04■□□□□ -0
NKX3-1-202ENST00000523261 ADAM23O75077 832 aa15.04■□□□□ -0
NKX3-1-202ENST00000523261 MED24O75448 989 aa15.04■□□□□ -0
NKX3-1-202ENST00000523261 CFHR1Q03591 330 aa15.04■□□□□ -0
NKX3-1-202ENST00000523261 CALCRLQ16602 461 aa15.04■□□□□ -0
NKX3-1-202ENST00000523261 HSF5Q4G112 596 aaPredicted RBP15.04■□□□□ -0
NKX3-1-202ENST00000523261 SLC36A4Q6YBV0 504 aa15.04■□□□□ -0
NKX3-1-202ENST00000523261 TAS1R3Q7RTX0 852 aa15.04■□□□□ -0
NKX3-1-202ENST00000523261 PGBD3Q8N328 593 aa15.04■□□□□ -0
NKX3-1-202ENST00000523261 TTC16Q8NEE8 873 aa15.04■□□□□ -0
NKX3-1-202ENST00000523261 BAHD1Q8TBE0 780 aaPredicted RBP15.04■□□□□ -0
NKX3-1-202ENST00000523261 JAKMIP1Q96N16 626 aaKnown RBP15.04■□□□□ -0
NKX3-1-202ENST00000523261 SLC22A12Q96S37 553 aa15.04■□□□□ -0
NKX3-1-202ENST00000523261 MRPL4Q9BYD3 311 aaKnown RBP15.04■□□□□ -0
NKX3-1-202ENST00000523261 ZCWPW1Q9H0M4 648 aa15.04■□□□□ -0
NKX3-1-202ENST00000523261 CLMPQ9H6B4 373 aa15.04■□□□□ -0
NKX3-1-202ENST00000523261 TUFT1Q9NNX1 390 aa15.04■□□□□ -0
NKX3-1-202ENST00000523261 MGAQ8IWI9 3026 aa15.03■□□□□ -0
NKX3-1-202ENST00000523261 TCRBV21S2A2A0A5A6 115 aa15.03■□□□□ -0
NKX3-1-202ENST00000523261 ARHGEF35A5YM69 484 aa15.03■□□□□ -0
NKX3-1-202ENST00000523261 CAPN9O14815 690 aa15.03■□□□□ -0
NKX3-1-202ENST00000523261 TADA3O75528 432 aa15.03■□□□□ -0
NKX3-1-202ENST00000523261 ATXN1LP0C7T5 689 aaKnown RBP15.03■□□□□ -0
NKX3-1-202ENST00000523261 HAPLN1P10915 354 aaPredicted RBP15.03■□□□□ -0
NKX3-1-202ENST00000523261 HARSP12081 509 aaKnown RBP15.03■□□□□ -0
NKX3-1-202ENST00000523261 TIE1P35590 1138 aa15.03■□□□□ -0
NKX3-1-202ENST00000523261 TXKP42681 527 aa15.03■□□□□ -0
NKX3-1-202ENST00000523261 SPAG1Q07617 926 aa15.03■□□□□ -0
NKX3-1-202ENST00000523261 MESP2Q0VG99 397 aa15.03■□□□□ -0
NKX3-1-202ENST00000523261 ZBTB6Q15916 424 aa15.03■□□□□ -0
NKX3-1-202ENST00000523261 PLEKHG6Q3KR16 790 aa15.03■□□□□ -0
NKX3-1-202ENST00000523261 SEZ6Q53EL9 994 aa15.03■□□□□ -0
NKX3-1-202ENST00000523261 EOGTQ5NDL2 527 aa15.03■□□□□ -0
NKX3-1-202ENST00000523261 BLOC1S2Q6QNY1 142 aa15.03■□□□□ -0
NKX3-1-202ENST00000523261 PCSK4Q6UW60 755 aa15.03■□□□□ -0
NKX3-1-202ENST00000523261 MPZL3Q6UWV2 235 aa15.03■□□□□ -0
NKX3-1-202ENST00000523261 GALNT15Q8N3T1 639 aa15.03■□□□□ -0
NKX3-1-202ENST00000523261 PDCD7Q8N8D1 485 aaKnown RBP15.03■□□□□ -0
NKX3-1-202ENST00000523261 FCRL3Q96P31 734 aaPredicted RBP15.03■□□□□ -0
NKX3-1-202ENST00000523261 TCHPQ9BT92 498 aa15.03■□□□□ -0
NKX3-1-202ENST00000523261 TMEM206Q9H813 350 aa15.03■□□□□ -0
NKX3-1-202ENST00000523261 ATMQ13315 3056 aa15.03■□□□□ -0
NKX3-1-202ENST00000523261 MYO18AQ92614 2054 aaKnown RBP15.02■□□□□ -0
NKX3-1-202ENST00000523261 ANK1P16157 1881 aa15.02■□□□□ -0
NKX3-1-202ENST00000523261 FAM149AA5PLN7 773 aa15.02■□□□□ -0
NKX3-1-202ENST00000523261 CAPN8A6NHC0 703 aa15.02■□□□□ -0
NKX3-1-202ENST00000523261 PPEF2O14830 753 aa15.02■□□□□ -0
NKX3-1-202ENST00000523261 NFATC1O95644 943 aa15.02■□□□□ -0
NKX3-1-202ENST00000523261 CYP3A5P20815 502 aa15.02■□□□□ -0
NKX3-1-202ENST00000523261 RPS6KB1P23443 525 aa15.02■□□□□ -0
NKX3-1-202ENST00000523261 KIR2DL1P43626 348 aaPredicted RBP15.02■□□□□ -0
NKX3-1-202ENST00000523261 GUCY2FP51841 1108 aa15.02■□□□□ -0
NKX3-1-202ENST00000523261 GRIK2Q13002 908 aa15.02■□□□□ -0
NKX3-1-202ENST00000523261 EMC10Q5UCC4 262 aa15.02■□□□□ -0
NKX3-1-202ENST00000523261 TRIML1Q8N9V2 468 aa15.02■□□□□ -0
NKX3-1-202ENST00000523261 SPRYD3Q8NCJ5 442 aa15.02■□□□□ -0
NKX3-1-202ENST00000523261 STKLD1Q8NE28 680 aa15.02■□□□□ -0
NKX3-1-202ENST00000523261 SETD7Q8WTS6 366 aaKnown RBP15.02■□□□□ -0
NKX3-1-202ENST00000523261 KIFAP3Q92845 792 aa15.02■□□□□ -0
NKX3-1-202ENST00000523261 ZBTB45Q96K62 511 aaPredicted RBP15.02■□□□□ -0
NKX3-1-202ENST00000523261 SENP8Q96LD8 212 aa15.02■□□□□ -0
NKX3-1-202ENST00000523261 HSPA12BQ96MM6 686 aa15.02■□□□□ -0
NKX3-1-202ENST00000523261 PNMA5Q96PV4 448 aa15.02■□□□□ -0
NKX3-1-202ENST00000523261 CYP2S1Q96SQ9 504 aa15.02■□□□□ -0
NKX3-1-202ENST00000523261 TMEM134Q9H6X4 195 aa15.02■□□□□ -0
NKX3-1-202ENST00000523261 ZDHHC4Q9NPG8 344 aa15.02■□□□□ -0
NKX3-1-202ENST00000523261 KNTC1P50748 2209 aa15.01□□□□□ -0.01
NKX3-1-202ENST00000523261 USP9XQ93008 2570 aaPredicted RBP15.01□□□□□ -0.01
NKX3-1-202ENST00000523261 IGHV1OR15-9A0A0B4J2B8 117 aa15.01□□□□□ -0.01
NKX3-1-202ENST00000523261 USP17L7P0C7H9 530 aa15.01□□□□□ -0.01
NKX3-1-202ENST00000523261 ODC1P11926 461 aa15.01□□□□□ -0.01
NKX3-1-202ENST00000523261 LILRA4P59901 499 aa15.01□□□□□ -0.01
NKX3-1-202ENST00000523261 SCRN1Q12765 414 aa15.01□□□□□ -0.01
NKX3-1-202ENST00000523261 ZC2HC1CQ53FD0 456 aaPredicted RBP15.01□□□□□ -0.01
NKX3-1-202ENST00000523261 LRRTM3Q86VH5 581 aa15.01□□□□□ -0.01
NKX3-1-202ENST00000523261 SPPL2BQ8TCT7 592 aa15.01□□□□□ -0.01
NKX3-1-202ENST00000523261 SH3RF2Q8TEC5 729 aa15.01□□□□□ -0.01
NKX3-1-202ENST00000523261 C2orf15Q8WU43 125 aaKnown RBP15.01□□□□□ -0.01
NKX3-1-202ENST00000523261 KCNB2Q92953 911 aa15.01□□□□□ -0.01
NKX3-1-202ENST00000523261 MTMR9Q96QG7 549 aa15.01□□□□□ -0.01
NKX3-1-202ENST00000523261 ZDHHC5Q9C0B5 715 aa15.01□□□□□ -0.01
NKX3-1-202ENST00000523261 FAM124BQ9H5Z6 455 aaPredicted RBP15.01□□□□□ -0.01
NKX3-1-202ENST00000523261 GJB4Q9NTQ9 266 aa15.01□□□□□ -0.01
NKX3-1-202ENST00000523261 MAGED2Q9UNF1 606 aaPredicted RBP15.01□□□□□ -0.01
NKX3-1-202ENST00000523261 STK36Q9NRP7 1315 aa15□□□□□ -0.01
NKX3-1-202ENST00000523261 TTC26A0AVF1 554 aa15□□□□□ -0.01
NKX3-1-202ENST00000523261 CCDC169A6NNP5 214 aa15□□□□□ -0.01
NKX3-1-202ENST00000523261 E9PAM4 449 aa15□□□□□ -0.01
NKX3-1-202ENST00000523261 CPLX1O14810 134 aa15□□□□□ -0.01
NKX3-1-202ENST00000523261 CYP11A1P05108 521 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms