RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 FARP1Q9Y4F1 1045 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-216ENST00000523088 GOLGA8QA0A0J9YX86 632 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 A0A1B0GWJ7 208 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 A0A1W2PRG0 241 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 KANSL1LA0AUZ9 987 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 GOLGA8OA6NCC3 632 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 GSG1L2A8MUP6 293 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 GOLGA8NF8WBI6 632 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 H0YGN5 161 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 MAP2K7O14733 419 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 CCNT1O60563 726 aaKnown RBP7.92□□□□□ -1.14
HDAC3-216ENST00000523088 SHOX2O60902 331 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-216ENST00000523088 CLN5O75503 358 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 TRIM16O95361 564 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 TTLL1O95922 423 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 TUBBP07437 444 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 UBTFL6P0CB48 400 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-216ENST00000523088 CYP2D6P10635 497 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 COL6A2P12110 1019 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 FCER1AP12319 257 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 PRKACAP17612 351 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 GBP1P32455 592 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 CCNG1P51959 295 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 OAZ1P54368 228 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 TMPRSS15P98073 1019 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 FANCCQ00597 558 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 KDSRQ06136 332 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 MXD4Q14582 209 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-216ENST00000523088 NFIL3Q16649 462 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 CYP27C1Q4G0S4 372 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 ZCWPW2Q504Y3 356 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 KRTCAP3Q53RY4 240 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 VWA5B1Q5TIE3 1220 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 ATL3Q6DD88 541 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 IQSEC1Q6DN90 963 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 AKAP14Q86UN6 197 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 STX12Q86Y82 276 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 LRRC71Q8N4P6 559 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 C7orf57Q8NEG2 295 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 PJA1Q8NG27 643 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 UTP15Q8TED0 518 aaKnown RBP7.92□□□□□ -1.14
HDAC3-216ENST00000523088 ATP8B4Q8TF62 1192 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 HNRNPLLQ8WVV9 542 aaKnown RBP7.92□□□□□ -1.14
HDAC3-216ENST00000523088 HSPH1Q92598 858 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 DYNLL2Q96FJ2 89 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 NSMCE3Q96MG7 304 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 FAM20AQ96MK3 541 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 C9orf16Q9BUW7 83 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 LRRC19Q9H756 370 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 FANCEQ9HB96 536 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 SLC38A10Q9HBR0 1119 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 C12orf4Q9NQ89 552 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 CNGB3Q9NQW8 809 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 INTS10Q9NVR2 710 aaKnown RBP7.92□□□□□ -1.14
HDAC3-216ENST00000523088 FANCLQ9NW38 375 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 IL37Q9NZH6 218 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 BTBD7Q9P203 1132 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 TBC1D14Q9P2M4 693 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 CTNNAL1Q9UBT7 734 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 ZNF180Q9UJW8 692 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 ZNF215Q9UL58 517 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-216ENST00000523088 ADAMTS5Q9UNA0 930 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 TELO2Q9Y4R8 837 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 PCDHB15Q9Y5E8 787 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 ZMYM6O95789 1325 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 LAMA4Q16363 1823 aa7.92□□□□□ -1.14
HDAC3-216ENST00000523088 ACOD1A6NK06 481 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 GOLGA8JA6NMD2 632 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 NOTOA8MTQ0 251 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 MINDY4BA8MYZ0 360 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 CENPBD1B2RD01 187 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 ALG1L2C9J202 215 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 FAM47E-STBD1D6RA91 191 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 MASP2O00187 686 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 DNM1LO00429 736 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 ATP2A1O14983 1001 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 PRPF3O43395 683 aaKnown RBP7.91□□□□□ -1.14
HDAC3-216ENST00000523088 NCK2O43639 380 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 ST18O60284 1047 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 ALDH1A2O94788 518 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 CTSHP09668 335 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 TFEBP19484 476 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 CASTP20810 708 aaKnown RBP7.91□□□□□ -1.14
HDAC3-216ENST00000523088 ADORA2AP29274 412 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 RGS7P49802 495 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 MLLT6P55198 1093 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-216ENST00000523088 CSNK2BP67870 215 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 PPP2R3AQ06190 1150 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 CDK18Q07002 472 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 PLS1Q14651 629 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 ELF2Q15723 593 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 DCAF17Q5H9S7 520 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-216ENST00000523088 AGMOQ6ZNB7 445 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 CCDC149Q6ZUS6 474 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 TOGARAM2Q6ZUX3 1019 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 OTOP3Q7RTS5 596 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 COMTD1Q86VU5 262 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 GATAD2AQ86YP4 633 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 RIOX2Q8IUF8 465 aa7.91□□□□□ -1.14
HDAC3-216ENST00000523088 CCDC63Q8NA47 563 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms