RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ARMCX6Q7L4S7 300 aa16.86■□□□□ 0.29
HDAC6-236ENST00000498808 CCDC33Q8N5R6 958 aa16.86■□□□□ 0.29
HDAC6-236ENST00000498808 FRMD1Q8N878 549 aa16.86■□□□□ 0.29
HDAC6-236ENST00000498808 TTC16Q8NEE8 873 aa16.86■□□□□ 0.29
HDAC6-236ENST00000498808 RLN3Q8WXF3 142 aa16.86■□□□□ 0.29
HDAC6-236ENST00000498808 FAM212AQ96EL1 285 aa16.86■□□□□ 0.29
HDAC6-236ENST00000498808 BICD1Q96G01 975 aa16.86■□□□□ 0.29
HDAC6-236ENST00000498808 FNBP1Q96RU3 617 aa16.86■□□□□ 0.29
HDAC6-236ENST00000498808 CYP2S1Q96SQ9 504 aa16.86■□□□□ 0.29
HDAC6-236ENST00000498808 MMTAG2Q9BU76 263 aaKnown RBP16.86■□□□□ 0.29
HDAC6-236ENST00000498808 NUSAP1Q9BXS6 441 aaKnown RBP16.86■□□□□ 0.29
HDAC6-236ENST00000498808 MMP17Q9ULZ9 603 aa16.86■□□□□ 0.29
HDAC6-236ENST00000498808 GPSM3Q9Y4H4 160 aa16.86■□□□□ 0.29
HDAC6-236ENST00000498808 STK24Q9Y6E0 443 aa16.86■□□□□ 0.29
HDAC6-236ENST00000498808 LOC400499M0QZD8 3231 aa16.86■□□□□ 0.29
HDAC6-236ENST00000498808 ADAMTS9Q9P2N4 1935 aa16.86■□□□□ 0.29
HDAC6-236ENST00000498808 UPK3BL1B0FP48 263 aa16.85■□□□□ 0.29
HDAC6-236ENST00000498808 UPK3BL2E5RIL1 263 aa16.85■□□□□ 0.29
HDAC6-236ENST00000498808 CYB561D2O14569 222 aa16.85■□□□□ 0.29
HDAC6-236ENST00000498808 TNFRSF10BO14763 440 aa16.85■□□□□ 0.29
HDAC6-236ENST00000498808 CSH1P0DML2 217 aa16.85■□□□□ 0.29
HDAC6-236ENST00000498808 CSH2P0DML3 217 aa16.85■□□□□ 0.29
HDAC6-236ENST00000498808 OPRD1P41143 372 aa16.85■□□□□ 0.29
HDAC6-236ENST00000498808 P2RY2P41231 377 aa16.85■□□□□ 0.29
HDAC6-236ENST00000498808 NCKAP1LP55160 1127 aa16.85■□□□□ 0.29
HDAC6-236ENST00000498808 FAM193AP78312 1265 aa16.85■□□□□ 0.29
HDAC6-236ENST00000498808 KYAT1Q16773 422 aa16.85■□□□□ 0.29
HDAC6-236ENST00000498808 KRT79Q5XKE5 535 aa16.85■□□□□ 0.29
HDAC6-236ENST00000498808 C19orf48Q6RUI8 117 aa16.85■□□□□ 0.29
HDAC6-236ENST00000498808 METTL23Q86XA0 190 aa16.85■□□□□ 0.29
HDAC6-236ENST00000498808 SYT12Q8IV01 421 aa16.85■□□□□ 0.29
HDAC6-236ENST00000498808 EFCAB13Q8IY85 973 aa16.85■□□□□ 0.29
HDAC6-236ENST00000498808 THEM5Q8N1Q8 247 aa16.85■□□□□ 0.29
HDAC6-236ENST00000498808 CHCHD4Q8N4Q1 142 aa16.85■□□□□ 0.29
HDAC6-236ENST00000498808 PYM1Q9BRP8 204 aaKnown RBP16.85■□□□□ 0.29
HDAC6-236ENST00000498808 PI4K2AQ9BTU6 479 aa16.85■□□□□ 0.29
HDAC6-236ENST00000498808 FOXP1Q9H334 677 aaPredicted RBP16.85■□□□□ 0.29
HDAC6-236ENST00000498808 KCNG1Q9UIX4 513 aa16.85■□□□□ 0.29
HDAC6-236ENST00000498808 PCDHB5Q9Y5E4 795 aa16.85■□□□□ 0.29
HDAC6-236ENST00000498808 ANAPC1Q9H1A4 1944 aa16.85■□□□□ 0.29
HDAC6-236ENST00000498808 ATXN2Q99700 1313 aaKnown RBP16.85■□□□□ 0.29
HDAC6-236ENST00000498808 PLXND1Q9Y4D7 1925 aa16.84■□□□□ 0.29
HDAC6-236ENST00000498808 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.84■□□□□ 0.29
HDAC6-236ENST00000498808 TRAPPC10P48553 1259 aa16.84■□□□□ 0.29
HDAC6-236ENST00000498808 LIG4P49917 911 aa16.84■□□□□ 0.29
HDAC6-236ENST00000498808 TMEM132DQ14C87 1099 aa16.84■□□□□ 0.29
HDAC6-236ENST00000498808 IL17AQ16552 155 aa16.84■□□□□ 0.29
HDAC6-236ENST00000498808 GAB4Q2WGN9 574 aa16.84■□□□□ 0.29
HDAC6-236ENST00000498808 SLC23A3Q6PIS1 610 aa16.84■□□□□ 0.29
HDAC6-236ENST00000498808 LPCAT2Q7L5N7 544 aa16.84■□□□□ 0.29
HDAC6-236ENST00000498808 TTC30AQ86WT1 665 aa16.84■□□□□ 0.29
HDAC6-236ENST00000498808 CD302Q8IX05 232 aa16.84■□□□□ 0.29
HDAC6-236ENST00000498808 TMEFF1Q8IYR6 380 aa16.84■□□□□ 0.29
HDAC6-236ENST00000498808 CCDC26Q8TAB7 109 aa16.84■□□□□ 0.29
HDAC6-236ENST00000498808 KCNN1Q92952 543 aa16.84■□□□□ 0.29
HDAC6-236ENST00000498808 RAB34Q9BZG1 259 aa16.84■□□□□ 0.29
HDAC6-236ENST00000498808 LINC00597Q9H2U6 94 aa16.84■□□□□ 0.29
HDAC6-236ENST00000498808 TMEM206Q9H813 350 aa16.84■□□□□ 0.29
HDAC6-236ENST00000498808 TRPC7Q9HCX4 862 aa16.84■□□□□ 0.29
HDAC6-236ENST00000498808 FSCN3Q9NQT6 498 aa16.84■□□□□ 0.29
HDAC6-236ENST00000498808 MBD1Q9UIS9 605 aaPredicted RBP16.84■□□□□ 0.29
HDAC6-236ENST00000498808 CPSF3Q9UKF6 684 aaKnown RBP16.84■□□□□ 0.29
HDAC6-236ENST00000498808 H0Y626 953 aa16.83■□□□□ 0.28
HDAC6-236ENST00000498808 HNRNPDLO14979 420 aaKnown RBP16.83■□□□□ 0.28
HDAC6-236ENST00000498808 PRPF40AO75400 957 aaKnown RBP16.83■□□□□ 0.28
HDAC6-236ENST00000498808 NOL4O94818 638 aa16.83■□□□□ 0.28
HDAC6-236ENST00000498808 TRIM16O95361 564 aa16.83■□□□□ 0.28
HDAC6-236ENST00000498808 PIGRP01833 764 aa16.83■□□□□ 0.28
HDAC6-236ENST00000498808 CKMP06732 381 aa16.83■□□□□ 0.28
HDAC6-236ENST00000498808 USP17L7P0C7H9 530 aa16.83■□□□□ 0.28
HDAC6-236ENST00000498808 CHRM1P11229 460 aaPredicted RBP16.83■□□□□ 0.28
HDAC6-236ENST00000498808 HELZP42694 1942 aaKnown RBP16.83■□□□□ 0.28
HDAC6-236ENST00000498808 TAF6P49848 677 aa16.83■□□□□ 0.28
HDAC6-236ENST00000498808 NR1H3Q13133 447 aa16.83■□□□□ 0.28
HDAC6-236ENST00000498808 DDR2Q16832 855 aa16.83■□□□□ 0.28
HDAC6-236ENST00000498808 ZC2HC1CQ53FD0 456 aaPredicted RBP16.83■□□□□ 0.28
HDAC6-236ENST00000498808 PEAR1Q5VY43 1037 aaPredicted RBP16.83■□□□□ 0.28
HDAC6-236ENST00000498808 RAB44Q7Z6P3 723 aaPredicted RBP16.83■□□□□ 0.28
HDAC6-236ENST00000498808 PDZD3Q86UT5 571 aa16.83■□□□□ 0.28
HDAC6-236ENST00000498808 DCP1BQ8IZD4 617 aaKnown RBP16.83■□□□□ 0.28
HDAC6-236ENST00000498808 SH3RF2Q8TEC5 729 aa16.83■□□□□ 0.28
HDAC6-236ENST00000498808 GCN1Q92616 2671 aaKnown RBP16.83■□□□□ 0.28
HDAC6-236ENST00000498808 COL26A1Q96A83 441 aa16.83■□□□□ 0.28
HDAC6-236ENST00000498808 TRMT2BQ96GJ1 504 aaKnown RBP16.83■□□□□ 0.28
HDAC6-236ENST00000498808 C8orf76Q96K31 380 aa16.83■□□□□ 0.28
HDAC6-236ENST00000498808 CCSER1Q9C0I3 900 aa16.83■□□□□ 0.28
HDAC6-236ENST00000498808 GCNT4Q9P109 453 aa16.83■□□□□ 0.28
HDAC6-236ENST00000498808 PCDH15Q96QU1 1955 aa16.82■□□□□ 0.28
HDAC6-236ENST00000498808 TRAV19A0A0A6YYK7 116 aa16.82■□□□□ 0.28
HDAC6-236ENST00000498808 A0A0B4J269 797 aa16.82■□□□□ 0.28
HDAC6-236ENST00000498808 NPHP3-ACAD11A0A0J9YXS1 232 aa16.82■□□□□ 0.28
HDAC6-236ENST00000498808 SLC12A3P55017 1021 aa16.82■□□□□ 0.28
HDAC6-236ENST00000498808 SLC39A4Q6P5W5 647 aa16.82■□□□□ 0.28
HDAC6-236ENST00000498808 SFTPA1Q8IWL2 248 aa16.82■□□□□ 0.28
HDAC6-236ENST00000498808 ARL14EPQ8N8R7 260 aaPredicted RBP16.82■□□□□ 0.28
HDAC6-236ENST00000498808 SYT2Q8N9I0 419 aaPredicted RBP16.82■□□□□ 0.28
HDAC6-236ENST00000498808 MYRFLQ96LU7 910 aa16.82■□□□□ 0.28
HDAC6-236ENST00000498808 PNMA5Q96PV4 448 aa16.82■□□□□ 0.28
HDAC6-236ENST00000498808 UXTQ9UBK9 157 aaPredicted RBP16.82■□□□□ 0.28
HDAC6-236ENST00000498808 PILRBQ9UKJ0 227 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms