RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 ZNF394Q53GI3 561 aa15.37■□□□□ 0.05
USP11-212ENST00000497179 TMEM270Q6UE05 265 aa15.37■□□□□ 0.05
USP11-212ENST00000497179 EP400NLQ6ZTU2 488 aa15.37■□□□□ 0.05
USP11-212ENST00000497179 TTC9BQ8N6N2 239 aa15.37■□□□□ 0.05
USP11-212ENST00000497179 RBBP8NLQ8NC74 664 aaPredicted RBP15.37■□□□□ 0.05
USP11-212ENST00000497179 NEK11Q8NG66 645 aa15.37■□□□□ 0.05
USP11-212ENST00000497179 HLA-CQ95604 372 aa15.37■□□□□ 0.05
USP11-212ENST00000497179 PCMTD1Q96MG8 357 aaPredicted RBP15.37■□□□□ 0.05
USP11-212ENST00000497179 B3GNT5Q9BYG0 378 aa15.37■□□□□ 0.05
USP11-212ENST00000497179 ATP8B3O60423 1300 aa15.37■□□□□ 0.05
USP11-212ENST00000497179 SPDYE4A6NLX3 237 aa15.36■□□□□ 0.05
USP11-212ENST00000497179 CBFA2T2O43439 604 aa15.36■□□□□ 0.05
USP11-212ENST00000497179 RFPL2O75678 378 aa15.36■□□□□ 0.05
USP11-212ENST00000497179 TPM3P06753 285 aa15.36■□□□□ 0.05
USP11-212ENST00000497179 KRT5P13647 590 aa15.36■□□□□ 0.05
USP11-212ENST00000497179 PBX1P40424 430 aa15.36■□□□□ 0.05
USP11-212ENST00000497179 TUFMP49411 452 aaKnown RBP15.36■□□□□ 0.05
USP11-212ENST00000497179 PLD1Q13393 1074 aa15.36■□□□□ 0.05
USP11-212ENST00000497179 PPM1LQ5SGD2 360 aa15.36■□□□□ 0.05
USP11-212ENST00000497179 SARM1Q6SZW1 724 aa15.36■□□□□ 0.05
USP11-212ENST00000497179 FAM35AQ86V20 835 aa15.36■□□□□ 0.05
USP11-212ENST00000497179 FUKQ8N0W3 1084 aa15.36■□□□□ 0.05
USP11-212ENST00000497179 C12orf76Q8N812 135 aaPredicted RBP15.36■□□□□ 0.05
USP11-212ENST00000497179 C12orf29Q8N999 325 aa15.36■□□□□ 0.05
USP11-212ENST00000497179 ZNF707Q96C28 371 aaPredicted RBP15.36■□□□□ 0.05
USP11-212ENST00000497179 RHOBTB2Q9BYZ6 727 aa15.36■□□□□ 0.05
USP11-212ENST00000497179 ZNF518BQ9C0D4 1074 aa15.36■□□□□ 0.05
USP11-212ENST00000497179 XPO4Q9C0E2 1151 aaKnown RBP15.36■□□□□ 0.05
USP11-212ENST00000497179 GPR88Q9GZN0 384 aa15.36■□□□□ 0.05
USP11-212ENST00000497179 FAM49BQ9NUQ9 324 aa15.36■□□□□ 0.05
USP11-212ENST00000497179 KIAA1257Q9ULG3 409 aa15.36■□□□□ 0.05
USP11-212ENST00000497179 SLC27A5Q9Y2P5 690 aa15.36■□□□□ 0.05
USP11-212ENST00000497179 PTPRDP23468 1912 aa15.36■□□□□ 0.05
USP11-212ENST00000497179 RNF225M0QZC1 329 aaPredicted RBP15.35■□□□□ 0.05
USP11-212ENST00000497179 LRG1P02750 347 aa15.35■□□□□ 0.05
USP11-212ENST00000497179 VDRP11473 427 aa15.35■□□□□ 0.05
USP11-212ENST00000497179 CCDC130P13994 396 aa15.35■□□□□ 0.05
USP11-212ENST00000497179 KCNA5P22460 613 aa15.35■□□□□ 0.05
USP11-212ENST00000497179 BDNFP23560 247 aa15.35■□□□□ 0.05
USP11-212ENST00000497179 CYP2F1P24903 491 aa15.35■□□□□ 0.05
USP11-212ENST00000497179 CDR1P51861 262 aa15.35■□□□□ 0.05
USP11-212ENST00000497179 POLR2FP61218 127 aaKnown RBP15.35■□□□□ 0.05
USP11-212ENST00000497179 TWF1Q12792 350 aa15.35■□□□□ 0.05
USP11-212ENST00000497179 RAPGEF1Q13905 1077 aa15.35■□□□□ 0.05
USP11-212ENST00000497179 PTPN21Q16825 1174 aa15.35■□□□□ 0.05
USP11-212ENST00000497179 MGAT5BQ3V5L5 792 aa15.35■□□□□ 0.05
USP11-212ENST00000497179 RARS2Q5T160 578 aaKnown RBP15.35■□□□□ 0.05
USP11-212ENST00000497179 ARHGAP17Q68EM7 881 aa15.35■□□□□ 0.05
USP11-212ENST00000497179 VSTM1Q6UX27 236 aa15.35■□□□□ 0.05
USP11-212ENST00000497179 CYP26C1Q6V0L0 522 aa15.35■□□□□ 0.05
USP11-212ENST00000497179 PAQR9Q6ZVX9 377 aa15.35■□□□□ 0.05
USP11-212ENST00000497179 SLC2A14Q8TDB8 520 aa15.35■□□□□ 0.05
USP11-212ENST00000497179 CYFIP2Q96F07 1278 aa15.35■□□□□ 0.05
USP11-212ENST00000497179 HEXIM2Q96MH2 286 aaKnown RBP15.35■□□□□ 0.05
USP11-212ENST00000497179 SEPT5Q99719 369 aaPredicted RBP15.35■□□□□ 0.05
USP11-212ENST00000497179 HNRNPABQ99729 332 aaKnown RBP15.35■□□□□ 0.05
USP11-212ENST00000497179 STK33Q9BYT3 514 aa15.35■□□□□ 0.05
USP11-212ENST00000497179 PRKD2Q9BZL6 878 aa15.35■□□□□ 0.05
USP11-212ENST00000497179 S1PR5Q9H228 398 aa15.35■□□□□ 0.05
USP11-212ENST00000497179 CEP72Q9P209 647 aa15.35■□□□□ 0.05
USP11-212ENST00000497179 CD207Q9UJ71 328 aa15.35■□□□□ 0.05
USP11-212ENST00000497179 SPTBN5Q9NRC6 3674 aaKnown RBP15.35■□□□□ 0.05
USP11-212ENST00000497179 CCDC195A0A1B0GUA6 201 aa15.34■□□□□ 0.05
USP11-212ENST00000497179 F8VZ95 297 aa15.34■□□□□ 0.05
USP11-212ENST00000497179 H3BQ06 376 aaPredicted RBP15.34■□□□□ 0.05
USP11-212ENST00000497179 FOXN3O00409 490 aaPredicted RBP15.34■□□□□ 0.05
USP11-212ENST00000497179 CLDN5O00501 218 aa15.34■□□□□ 0.05
USP11-212ENST00000497179 SOAT2O75908 522 aa15.34■□□□□ 0.05
USP11-212ENST00000497179 CD19P15391 556 aa15.34■□□□□ 0.05
USP11-212ENST00000497179 ATF6P18850 670 aa15.34■□□□□ 0.05
USP11-212ENST00000497179 ALDH1A3P47895 512 aa15.34■□□□□ 0.05
USP11-212ENST00000497179 JAM2P57087 298 aa15.34■□□□□ 0.05
USP11-212ENST00000497179 RPL10AP62906 217 aaKnown RBP15.34■□□□□ 0.05
USP11-212ENST00000497179 ITIH3Q06033 890 aa15.34■□□□□ 0.05
USP11-212ENST00000497179 DRAP1Q14919 205 aaPredicted RBP15.34■□□□□ 0.05
USP11-212ENST00000497179 LEXMQ3ZCV2 418 aa15.34■□□□□ 0.05
USP11-212ENST00000497179 SGO2Q562F6 1265 aa15.34■□□□□ 0.05
USP11-212ENST00000497179 PPP1R26Q5T8A7 1209 aaPredicted RBP15.34■□□□□ 0.05
USP11-212ENST00000497179 TMC5Q6UXY8 1006 aa15.34■□□□□ 0.05
USP11-212ENST00000497179 GPR149Q86SP6 731 aa15.34■□□□□ 0.05
USP11-212ENST00000497179 FAM71AQ8IYT1 594 aa15.34■□□□□ 0.05
USP11-212ENST00000497179 SMRP1Q8NCR6 262 aa15.34■□□□□ 0.05
USP11-212ENST00000497179 SMARCD1Q96GM5 515 aa15.34■□□□□ 0.05
USP11-212ENST00000497179 MED10Q9BTT4 135 aa15.34■□□□□ 0.05
USP11-212ENST00000497179 ADAM7Q9H2U9 754 aa15.34■□□□□ 0.05
USP11-212ENST00000497179 BRWD1Q9NSI6 2320 aa15.33■□□□□ 0.05
USP11-212ENST00000497179 O00370 1275 aa15.33■□□□□ 0.04
USP11-212ENST00000497179 TRIM66O15016 1216 aa15.33■□□□□ 0.04
USP11-212ENST00000497179 CCL16O15467 120 aa15.33■□□□□ 0.04
USP11-212ENST00000497179 AP5Z1O43299 807 aa15.33■□□□□ 0.04
USP11-212ENST00000497179 XYLBO75191 536 aa15.33■□□□□ 0.04
USP11-212ENST00000497179 AP1G2O75843 785 aa15.33■□□□□ 0.04
USP11-212ENST00000497179 PNMA6AP0CW24 399 aaPredicted RBP15.33■□□□□ 0.04
USP11-212ENST00000497179 ADORA2BP29275 332 aa15.33■□□□□ 0.04
USP11-212ENST00000497179 USP8P40818 1118 aa15.33■□□□□ 0.04
USP11-212ENST00000497179 CACNA2D1P54289 1103 aa15.33■□□□□ 0.04
USP11-212ENST00000497179 SMAD4Q13485 552 aaKnown RBP15.33■□□□□ 0.04
USP11-212ENST00000497179 CLUL1Q15846 466 aa15.33■□□□□ 0.04
USP11-212ENST00000497179 FIGNQ5HY92 759 aa15.33■□□□□ 0.04
USP11-212ENST00000497179 FEZF2Q8TBJ5 459 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms