RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 GNA15P30679 374 aa13.2□□□□□ -0.3
SNX17-208ENST00000493711 CLCN1P35523 988 aa13.2□□□□□ -0.3
SNX17-208ENST00000493711 ZNF394Q53GI3 561 aa13.2□□□□□ -0.3
SNX17-208ENST00000493711 PPP1R2P3Q6NXS1 205 aa13.2□□□□□ -0.3
SNX17-208ENST00000493711 PRSS55Q6UWB4 352 aaPredicted RBP13.2□□□□□ -0.3
SNX17-208ENST00000493711 RTL10Q7L3V2 364 aa13.2□□□□□ -0.3
SNX17-208ENST00000493711 SPATA2LQ8IUW3 424 aaPredicted RBP13.2□□□□□ -0.3
SNX17-208ENST00000493711 SPC24Q8NBT2 197 aa13.2□□□□□ -0.3
SNX17-208ENST00000493711 SPPL2BQ8TCT7 592 aa13.2□□□□□ -0.3
SNX17-208ENST00000493711 MRPL38Q96DV4 380 aaKnown RBP13.2□□□□□ -0.3
SNX17-208ENST00000493711 B3GALT6Q96L58 329 aa13.2□□□□□ -0.3
SNX17-208ENST00000493711 GUCD1Q96NT3 240 aa13.2□□□□□ -0.3
SNX17-208ENST00000493711 HNRNPABQ99729 332 aaKnown RBP13.2□□□□□ -0.3
SNX17-208ENST00000493711 HESX1Q9UBX0 185 aa13.2□□□□□ -0.3
SNX17-208ENST00000493711 PCDHB5Q9Y5E4 795 aa13.2□□□□□ -0.3
SNX17-208ENST00000493711 CDY1Q9Y6F8 540 aa13.2□□□□□ -0.3
SNX17-208ENST00000493711 ANK1P16157 1881 aa13.2□□□□□ -0.3
SNX17-208ENST00000493711 C2orf71A6NGG8 1288 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 RNF225M0QZC1 329 aaPredicted RBP13.19□□□□□ -0.3
SNX17-208ENST00000493711 THAP12O43422 761 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 LSM8O95777 96 aaKnown RBP13.19□□□□□ -0.3
SNX17-208ENST00000493711 CYP11B1P15538 503 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 ACAT1P24752 427 aaKnown RBP13.19□□□□□ -0.3
SNX17-208ENST00000493711 OR1D2P34982 312 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 CA8P35219 290 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 ADKP55263 362 aaKnown RBP13.19□□□□□ -0.3
SNX17-208ENST00000493711 SNX16P57768 344 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 ERVFC1P60507 584 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 CDR2Q01850 454 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 ARID5AQ03989 594 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 CFAP221Q4G0U5 840 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 SLC39A12Q504Y0 691 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 MDH1BQ5I0G3 518 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 ZNF697Q5TEC3 545 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 LCLAT1Q6UWP7 414 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 TRIM72Q6ZMU5 477 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 IRF2BP2Q7Z5L9 587 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 TC2NQ8N9U0 490 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 CCDC112Q8NEF3 446 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 OR10T2Q8NGX3 314 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 ZNF461Q8TAF7 563 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 EPS8L1Q8TE68 723 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 ZNF606Q8WXB4 792 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 CYFIP2Q96F07 1278 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 CEP295NLQ96MC4 621 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 TWNKQ96RR1 684 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 CDCA3Q99618 268 aaPredicted RBP13.19□□□□□ -0.3
SNX17-208ENST00000493711 PKMYT1Q99640 499 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 CLSTN3Q9BQT9 956 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 PDCL3Q9H2J4 239 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 CRTAC1Q9NQ79 661 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 HMGXB4Q9UGU5 601 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 AFF4Q9UHB7 1163 aaKnown RBP13.19□□□□□ -0.3
SNX17-208ENST00000493711 GTF3C4Q9UKN8 822 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 PCDHGC3Q9UN70 934 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 CEP83Q9Y592 693 aa13.19□□□□□ -0.3
SNX17-208ENST00000493711 PDCD11Q14690 1871 aaKnown RBP13.19□□□□□ -0.3
SNX17-208ENST00000493711 SSU72P8A0A1W2PR75 194 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 O00370 1275 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 ABLIM3O94929 683 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 PTMAP06454 111 aaKnown RBP13.18□□□□□ -0.3
SNX17-208ENST00000493711 CNPP09543 421 aaKnown RBP13.18□□□□□ -0.3
SNX17-208ENST00000493711 SETSIPP0DME0 302 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 DNAJB1P25685 340 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 KLRC2P26717 231 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 ELF1P32519 619 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 MAGEA11P43364 429 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 TUFMP49411 452 aaKnown RBP13.18□□□□□ -0.3
SNX17-208ENST00000493711 ARPP19P56211 112 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 PSMC1P62191 440 aaKnown RBP13.18□□□□□ -0.3
SNX17-208ENST00000493711 ROR1Q01973 937 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 TDRD12Q587J7 1177 aaKnown RBP13.18□□□□□ -0.3
SNX17-208ENST00000493711 PLPP4Q5VZY2 271 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 VSTM1Q6UX27 236 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 CYP26C1Q6V0L0 522 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 SLC47A2Q86VL8 602 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 TMTC1Q8IUR5 882 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 SPNS2Q8IVW8 549 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 ANKRD52Q8NB46 1076 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 HDAC7Q8WUI4 952 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 SMARCD1Q96GM5 515 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 NOX5Q96PH1 765 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 KLHL5Q96PQ7 755 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 MED10Q9BTT4 135 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 UBXN6Q9BZV1 441 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 ZNF518BQ9C0D4 1074 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 LHX5Q9H2C1 402 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 DPEP3Q9H4B8 488 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 CERS4Q9HA82 394 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 NOCTQ9UK39 431 aaKnown RBP13.18□□□□□ -0.3
SNX17-208ENST00000493711 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.18□□□□□ -0.3
SNX17-208ENST00000493711 LHX6Q9UPM6 363 aa13.18□□□□□ -0.3
SNX17-208ENST00000493711 TDRD15B5MCY1 1934 aaKnown RBP13.17□□□□□ -0.3
SNX17-208ENST00000493711 MYBPHLA2RUH7 354 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 TEX28O15482 410 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 ATP2C2O75185 946 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 GLUD1P00367 558 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 FAM200BP0CF97 657 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 PNMA6AP0CW24 399 aaPredicted RBP13.17□□□□□ -0.3
SNX17-208ENST00000493711 ATF2P15336 505 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms