RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 A8MXQ7 604 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 TACC1O75410 805 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 KRT13P13646 458 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 HMGA1P17096 107 aaKnown RBP8.84□□□□□ -0.99
HDAC6-221ENST00000477561 CD72P21854 359 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 BDNFP23560 247 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 RPL13P26373 211 aaKnown RBP8.84□□□□□ -0.99
HDAC6-221ENST00000477561 ATICP31939 592 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 PSMC2P35998 433 aaKnown RBP8.84□□□□□ -0.99
HDAC6-221ENST00000477561 GCLMP48507 274 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 VAMP7P51809 220 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 AP3M2P53677 418 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 TYRO3Q06418 890 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 STX1AQ16623 288 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 ZCWPW2Q504Y3 356 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 SLC44A4Q53GD3 710 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 ZNF667Q5HYK9 610 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 MDH1BQ5I0G3 518 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 ZNF658Q5TYW1 1059 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-221ENST00000477561 SPOPLQ6IQ16 392 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 FAM171BQ6P995 826 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 VITQ6UXI7 678 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 SV2AQ7L0J3 742 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 ARID3BQ8IVW6 561 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-221ENST00000477561 SPATA18Q8TC71 538 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 TMC2Q8TDI7 906 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 TMEM174Q8WUU8 243 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 RSPRY1Q96DX4 576 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 FUCA2Q9BTY2 467 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 MKNK1Q9BUB5 465 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 FOXQ1Q9C009 403 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 SMG9Q9H0W8 520 aaKnown RBP8.84□□□□□ -0.99
HDAC6-221ENST00000477561 SDCBP2Q9H190 292 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 DPEP3Q9H4B8 488 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 SMYD3Q9H7B4 428 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 BRD9Q9H8M2 597 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 TBC1D17Q9HA65 648 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 IL21Q9HBE4 155 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 KIAA1468Q9P260 1216 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 MAGEC2Q9UBF1 373 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-221ENST00000477561 COL4A3Q01955 1670 aa8.84□□□□□ -0.99
HDAC6-221ENST00000477561 TRIM49BA6NDI0 452 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 SLC38A8A6NNN8 435 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 HEPACAM2A8MVW5 462 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 H0Y858 1186 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 BIN1O00499 593 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 CLDN5O00501 218 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 LRRN2O75325 713 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 FGF19O95750 216 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 STAU1O95793 577 aaKnown RBP8.83□□□□□ -1
HDAC6-221ENST00000477561 HLA-DRAP01903 254 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 DCNP07585 359 aaKnown RBP8.83□□□□□ -1
HDAC6-221ENST00000477561 PTPN1P18031 435 aaKnown RBP8.83□□□□□ -1
HDAC6-221ENST00000477561 AOC1P19801 751 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 GDI1P31150 447 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 GRIK1P39086 918 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 PLA2G5P39877 138 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 PIK3CAP42336 1068 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 CLCN5P51795 746 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 PMS1P54277 932 aaKnown RBP8.83□□□□□ -1
HDAC6-221ENST00000477561 NLRP12P59046 1061 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 RPL10AP62906 217 aaKnown RBP8.83□□□□□ -1
HDAC6-221ENST00000477561 PPP3CAQ08209 521 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 TCF15Q12870 199 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 ORC1Q13415 861 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 NFIL3Q16649 462 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 SGSM1Q2NKQ1 1148 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 ZACNQ401N2 412 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 ARHGAP15Q53QZ3 475 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 ANKRD40Q6AI12 368 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 C4orf50Q6ZRC1 276 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 INTS8Q75QN2 995 aaKnown RBP8.83□□□□□ -1
HDAC6-221ENST00000477561 TMEM150AQ86TG1 271 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 PIP4P2Q8N4L2 257 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 MYCBPAPQ8TBZ2 947 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 TAS1R2Q8TE23 839 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 PCED1BQ96HM7 432 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 LRRC3BQ96PB8 259 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 GSDMAQ96QA5 445 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 GCNAQ96QF7 691 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 TRMT61BQ9BVS5 477 aaKnown RBP8.83□□□□□ -1
HDAC6-221ENST00000477561 SLC46A2Q9BY10 475 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 GPR88Q9GZN0 384 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 NAT10Q9H0A0 1025 aaKnown RBP8.83□□□□□ -1
HDAC6-221ENST00000477561 TASP1Q9H6P5 420 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 GRPEL1Q9HAV7 217 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 ABCB6Q9NP58 842 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 HEBP1Q9NRV9 189 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 ANO10Q9NW15 660 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 MAN1B1Q9UKM7 699 aa8.83□□□□□ -1
HDAC6-221ENST00000477561 DPYSL4O14531 572 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 IKBKBO14920 756 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 ZNF263O14978 683 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 CETN3O15182 167 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 MAPK13O15264 365 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 GALR2O43603 387 aaPredicted RBP8.82□□□□□ -1
HDAC6-221ENST00000477561 NOL4O94818 638 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 PRAMEF12O95522 483 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 F11P03951 625 aa8.82□□□□□ -1
HDAC6-221ENST00000477561 CSH1P0DML2 217 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms