RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 COG2Q14746 738 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 ARHGAP44Q17R89 818 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 TBC1D10BQ4KMP7 808 aaPredicted RBP6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 MUM1L1Q5H9M0 696 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 SEL1L2Q5TEA6 688 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 FAM160B1Q5W0V3 765 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 SLC6A19Q695T7 634 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 KRT39Q6A163 491 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 SLFN12LQ6IEE8 588 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 OGFOD2Q6N063 350 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 C11orf63Q6NUN7 778 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 CROCCP2Q86T23 111 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 POU5F2Q8N7G0 328 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 USP38Q8NB14 1042 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 CHST13Q8NET6 341 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 RIN3Q8TB24 985 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 IFT81Q8WYA0 676 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 POMGNT1Q8WZA1 660 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 BORCS6Q96GS4 357 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 C12orf42Q96LP6 360 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 FNBP1Q96RU3 617 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 KRT12Q99456 494 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 AGPAT1Q99943 283 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 LRRC1Q9BTT6 524 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 FAM107BQ9H098 131 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 TSPYL1Q9H0U9 437 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 TMEM8AQ9HCN3 771 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 SIX2Q9NPC8 291 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 UBE2TQ9NPD8 197 aaPredicted RBP6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 ST7Q9NRC1 585 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 FAM114A2Q9NRY5 505 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 C1orf112Q9NSG2 853 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 RBM12Q9NTZ6 932 aaKnown RBP6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 GOLGA6AQ9NYA3 693 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 CTTNBP2NLQ9P2B4 639 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 SLC9A2Q9UBY0 812 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 TJP2Q9UDY2 1190 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 ADAM21Q9UKJ8 722 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 MTUS1Q9ULD2 1270 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 TBX20Q9UMR3 447 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 UTP11Q9Y3A2 253 aaKnown RBP6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 CD2APQ9Y5K6 639 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 KIF13BQ9NQT8 1826 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 DENND3A2RUS2 1198 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 LRRIQ3A6PVS8 624 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 FAM155AB1AL88 458 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 H3BQF6 201 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 DDX3XO00571 662 aaKnown RBP eCLIP6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 HNRNPDLO14979 420 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 ATP2A1O14983 1001 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 NKRFO15226 690 aaKnown RBP eCLIP6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 RTN2O75298 545 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 LDHAP00338 332 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 KCNA3P22001 575 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 GARTP22102 1010 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 NF2P35240 595 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 GCLMP48507 274 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 POLGP54098 1239 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 HMGCS2P54868 508 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 MRPS9P82933 396 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 ZP2Q05996 745 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 MAPK7Q13164 816 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 ITGB3BPQ13352 177 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 PRPF4BQ13523 1007 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 BAATQ14032 418 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 STXBP2Q15833 593 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 SNRNP35Q16560 246 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 BRDTQ58F21 947 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 XKR3Q5GH77 459 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 SLC30A10Q6XR72 485 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 RUFY4Q6ZNE9 571 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 KLHL7Q8IXQ5 586 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 GPD1LQ8N335 351 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 PPM1KQ8N3J5 372 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 ARFGAP2Q8N6H7 521 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 DNERQ8NFT8 737 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 IL31RAQ8NI17 732 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 DEPTORQ8TB45 409 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 MAIP1Q8WWC4 291 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 DHX38Q92620 1227 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 ATG4CQ96DT6 458 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 FAM167AQ96KS9 214 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 TEPSINQ96N21 525 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 INPP4AQ96PE3 977 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 STRA6Q9BX79 667 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 PACSIN1Q9BY11 444 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 IMPG2Q9BZV3 1241 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 CARD9Q9H257 536 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 PCIF1Q9H4Z3 704 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 TAF1DQ9H5J8 278 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 FAM204AQ9H8W3 233 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 EPB41L5Q9HCM4 733 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 GDF3Q9NR23 364 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 SEMA3GQ9NS98 782 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 NRBP2Q9NSY0 501 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 COL20A1Q9P218 1284 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 GABBR1Q9UBS5 961 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 PGAP2Q9UHJ9 254 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms