RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 ACTR3P61158 418 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 DYNLT1P63172 113 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 HPCAP84074 193 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 PLCB3Q01970 1234 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 LMBRD2Q68DH5 695 aaPredicted RBP8.33□□□□□ -1.08
TPM3-215ENST00000469717 C3orf62Q6ZUJ4 267 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 PRPF39Q86UA1 669 aaKnown RBP8.33□□□□□ -1.08
TPM3-215ENST00000469717 DDX1Q92499 740 aaKnown RBP8.33□□□□□ -1.08
TPM3-215ENST00000469717 HSPBAP1Q96EW2 488 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 C11orf70Q9BRQ4 267 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 YIPF2Q9BWQ6 316 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 LIN28AQ9H9Z2 209 aaKnown RBP8.33□□□□□ -1.08
TPM3-215ENST00000469717 USP29Q9HBJ7 922 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 GINM1Q9NU53 330 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 WNK3Q9BYP7 1800 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 CDK5RAP2Q96SN8 1893 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 MYH9P35579 1960 aaKnown RBP8.33□□□□□ -1.08
TPM3-215ENST00000469717 STRCQ7RTU9 1775 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 hCG_1984214I3L0E3 225 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 ABHD2P08910 425 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 C6orf222P0C671 652 aaPredicted RBP8.33□□□□□ -1.08
TPM3-215ENST00000469717 GZMAP12544 262 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 ZNF76P36508 570 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 GDF10P55107 478 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 IRX4P78413 519 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 CAV1Q03135 178 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 ASPHQ12797 758 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 MED21Q13503 144 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 PRAMEF18Q5VWM3 479 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 RHPN2Q8IUC4 686 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 ZNF713Q8N859 430 aaPredicted RBP8.33□□□□□ -1.08
TPM3-215ENST00000469717 BANPQ8N9N5 519 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 CCDC110Q8TBZ0 833 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 TAS1R2Q8TE23 839 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 MZB1Q8WU39 189 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 PPP2R3CQ969Q6 453 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 GRIP2Q9C0E4 1043 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 ARHGEF38Q9NXL2 777 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 PIM2Q9P1W9 311 aa8.33□□□□□ -1.08
TPM3-215ENST00000469717 CAPN8A6NHC0 703 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 LPXNO60711 386 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 ZMPSTE24O75844 475 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 BBOX1O75936 387 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 HNRNPCP07910 306 aaKnown RBP eCLIP8.32□□□□□ -1.08
TPM3-215ENST00000469717 SMIM18P0DKX4 95 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 MAP3K10Q02779 954 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 PRKD1Q15139 912 aaPredicted RBP8.32□□□□□ -1.08
TPM3-215ENST00000469717 DPY19L2Q6NUT2 758 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 PDSS2Q86YH6 399 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 IGDCC3Q8IVU1 814 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 CLMNQ96JQ2 1002 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 WDR18Q9BV38 432 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 KLHL4Q9C0H6 718 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 IRS2Q9Y4H2 1338 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 UTRNP46939 3433 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 EIF3DO15371 548 aaKnown RBP eCLIP8.32□□□□□ -1.08
TPM3-215ENST00000469717 PENKP01210 267 aaPredicted RBP8.32□□□□□ -1.08
TPM3-215ENST00000469717 VCLP18206 1134 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 RAP1GDS1P52306 607 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 GEMIN4P57678 1058 aaKnown RBP8.32□□□□□ -1.08
TPM3-215ENST00000469717 AP2B1P63010 937 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 CCNG2Q16589 344 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 TCHHL1Q5QJ38 904 aaPredicted RBP8.32□□□□□ -1.08
TPM3-215ENST00000469717 ACAD10Q6JQN1 1059 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 MFSD7Q6UXD7 560 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 ACAD11Q709F0 780 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 TRIM42Q8IWZ5 723 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 ARHGAP18Q8N392 663 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 RIN3Q8TB24 985 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 CRYGNQ8WXF5 182 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 MASTLQ96GX5 879 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 MMP19Q99542 508 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 KIFC3Q9BVG8 833 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 PLVAPQ9BX97 442 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 UVRAGQ9P2Y5 699 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 APPL1Q9UKG1 709 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 CYP3A7-CYP3A51PA0A087WV96 503 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 CAPN14A8MX76 684 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 TM7SF2O76062 418 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 OATP04181 439 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 TFAP2AP05549 437 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 CDK4P11802 303 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 CD1EP15812 388 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 CYP3A7P24462 503 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 GPSM2P81274 684 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 PDK3Q15120 406 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 TRIP10Q15642 601 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 DBN1Q16643 649 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 GRAMD1BQ3KR37 738 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 BBS9Q3SYG4 887 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 MMEL1Q495T6 779 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 NADK2Q4G0N4 442 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 KLHDC10Q6PID8 442 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 SDCCAG8Q86SQ7 713 aaPredicted RBP8.32□□□□□ -1.08
TPM3-215ENST00000469717 TDRPQ86YL5 185 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 SHC3Q92529 594 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 HSD17B14Q9BPX1 270 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 SPON1Q9HCB6 807 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 GPRC5CQ9NQ84 441 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 LARSQ9P2J5 1176 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms