RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 DNAJC18Q9H819 358 aa14.41□□□□□ -0.1
BRAT1-203ENST00000467558 ASTN2O75129 1339 aaPredicted RBP14.41□□□□□ -0.1
BRAT1-203ENST00000467558 MAFO75444 373 aaPredicted RBP14.4□□□□□ -0.1
BRAT1-203ENST00000467558 EPHB2P29323 1055 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 HNRNPH3P31942 346 aaKnown RBP14.4□□□□□ -0.1
BRAT1-203ENST00000467558 POU5F1BQ06416 359 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 ART3Q13508 389 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 DGKZQ13574 1117 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 MFSD10Q14728 455 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 CCNG2Q16589 344 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 FSCBQ5H9T9 825 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 WDR59Q6PJI9 974 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 PLPPR4Q7Z2D5 763 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 NOP9Q86U38 636 aaKnown RBP14.4□□□□□ -0.1
BRAT1-203ENST00000467558 RMDN1Q96DB5 314 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 INHBEP58166 350 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 IRF2BP1Q8IU81 584 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 CLMNQ96JQ2 1002 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 COLEC11Q9BWP8 271 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 PCDHB7Q9Y5E2 793 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 PCDHGC5Q9Y5F6 944 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 FAM47DPA6NHR8 397 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 EPHB6O15197 1021 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 TGFB1I1O43294 461 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 PAEPP09466 180 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 RARGP13631 454 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 PTENP60484 403 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 DLG4P78352 724 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 ANO5Q75V66 913 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 ARHGAP18Q8N392 663 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 CCNYL1Q8N7R7 359 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 FAM172AQ8WUF8 416 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 DDX23Q9BUQ8 820 aaKnown RBP14.4□□□□□ -0.1
BRAT1-203ENST00000467558 GANQ9H2C0 597 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 Q9H521 79 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 XAB2Q9HCS7 855 aaKnown RBP14.4□□□□□ -0.1
BRAT1-203ENST00000467558 WHRNQ9P202 907 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 TCHHQ07283 1943 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 DPYSL4O14531 572 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 EIF3HO15372 352 aaKnown RBP eCLIP14.4□□□□□ -0.1
BRAT1-203ENST00000467558 TTC4O95801 387 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 CHN1P15882 459 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 CLK2P49760 499 aaKnown RBP14.4□□□□□ -0.1
BRAT1-203ENST00000467558 ZNF268Q14587 947 aaPredicted RBP14.4□□□□□ -0.1
BRAT1-203ENST00000467558 PPHLN1Q8NEY8 458 aaKnown RBP14.4□□□□□ -0.1
BRAT1-203ENST00000467558 FBXO25Q8TCJ0 367 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 EPS8L1Q8TE68 723 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 RXFP2Q8WXD0 754 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 BAP1Q92560 729 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 PABPC5Q96DU9 382 aaKnown RBP14.4□□□□□ -0.1
BRAT1-203ENST00000467558 DDX27Q96GQ7 796 aaKnown RBP14.4□□□□□ -0.1
BRAT1-203ENST00000467558 ABI2Q9NYB9 513 aaPredicted RBP14.4□□□□□ -0.1
BRAT1-203ENST00000467558 ZFP69BQ9UJL9 534 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 DSEQ9UL01 958 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 USP18Q9UMW8 372 aa14.4□□□□□ -0.1
BRAT1-203ENST00000467558 RGPD5Q99666 1765 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 LACTBL1A8MY62 500 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 ANKRD65E5RJM6 399 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 SLC2A3P11169 496 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 NDST1P52848 882 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 MARSP56192 900 aaKnown RBP14.39□□□□□ -0.11
BRAT1-203ENST00000467558 OCRLQ01968 901 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 BST2Q10589 180 aaKnown RBP14.39□□□□□ -0.11
BRAT1-203ENST00000467558 NT5DC3Q86UY8 548 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 EMC1Q8N766 993 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 STKLD1Q8NE28 680 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 SERPINI1Q99574 410 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 MAF1Q9H063 256 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 WDCPQ9H6R7 721 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 BAG5Q9UL15 447 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 GOLGA8RI6L899 631 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 HAUS5O94927 633 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 FBXO21O94952 628 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 CTCFP49711 727 aaPredicted RBP14.39□□□□□ -0.11
BRAT1-203ENST00000467558 PSEN2P49810 448 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 SPOCD1Q6ZMY3 1216 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 ACAD11Q709F0 780 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 CCT8L2Q96SF2 557 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 TCP11X1B4DZS4 312 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 MYO1CO00159 1063 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 HMBSP08397 361 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 EIF4BP23588 611 aaKnown RBP14.39□□□□□ -0.11
BRAT1-203ENST00000467558 YY1P25490 414 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 LBX2Q6XYB7 198 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 TFB1MQ8WVM0 346 aaKnown RBP14.39□□□□□ -0.11
BRAT1-203ENST00000467558 COPS5Q92905 334 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 ANKZF1Q9H8Y5 726 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 LSM7Q9UK45 103 aaKnown RBP14.39□□□□□ -0.11
BRAT1-203ENST00000467558 TSPAN16Q9UKR8 245 aa14.39□□□□□ -0.11
BRAT1-203ENST00000467558 GYG2O15488 501 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 POLBP06746 335 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 ADRB2P07550 413 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 NCKAP1LP55160 1127 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 FKBP1BP68106 108 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 OTUD4Q01804 1114 aaKnown RBP14.38□□□□□ -0.11
BRAT1-203ENST00000467558 AMIGO3Q86WK7 504 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 SHCBP1Q8NEM2 672 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 KAT5Q92993 513 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 ASIC4Q96FT7 647 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 SERPINB12Q96P63 405 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms