RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 LRRC3Q9BY71 257 aa24.82■■□□□ 1.56
SUMO3-205ENST00000466861 MRPS23Q9Y3D9 190 aaKnown RBP24.82■■□□□ 1.56
SUMO3-205ENST00000466861 NFE2L3Q9Y4A8 694 aa24.82■■□□□ 1.56
SUMO3-205ENST00000466861 LRRN2O75325 713 aa24.81■■□□□ 1.56
SUMO3-205ENST00000466861 CSH1P0DML2 217 aa24.81■■□□□ 1.56
SUMO3-205ENST00000466861 CSH2P0DML3 217 aa24.81■■□□□ 1.56
SUMO3-205ENST00000466861 CYP2F1P24903 491 aa24.81■■□□□ 1.56
SUMO3-205ENST00000466861 GBP2P32456 591 aaPredicted RBP24.81■■□□□ 1.56
SUMO3-205ENST00000466861 NTHL1P78549 312 aa24.81■■□□□ 1.56
SUMO3-205ENST00000466861 TYRO3Q06418 890 aa24.81■■□□□ 1.56
SUMO3-205ENST00000466861 PRSS36Q5K4E3 855 aa24.81■■□□□ 1.56
SUMO3-205ENST00000466861 EHBP1Q8NDI1 1231 aa24.81■■□□□ 1.56
SUMO3-205ENST00000466861 ELMO3Q96BJ8 720 aa24.81■■□□□ 1.56
SUMO3-205ENST00000466861 NAT10Q9H0A0 1025 aaKnown RBP24.81■■□□□ 1.56
SUMO3-205ENST00000466861 DPEP3Q9H4B8 488 aa24.81■■□□□ 1.56
SUMO3-205ENST00000466861 GDE1Q9NZC3 331 aa24.81■■□□□ 1.56
SUMO3-205ENST00000466861 CUL9Q8IWT3 2517 aa24.8■■□□□ 1.56
SUMO3-205ENST00000466861 TRIM66O15016 1216 aa24.8■■□□□ 1.56
SUMO3-205ENST00000466861 LAMP2P13473 410 aa24.8■■□□□ 1.56
SUMO3-205ENST00000466861 CYP27A1Q02318 531 aa24.8■■□□□ 1.56
SUMO3-205ENST00000466861 CUL2Q13617 745 aa24.8■■□□□ 1.56
SUMO3-205ENST00000466861 GET4Q7L5D6 327 aaPredicted RBP24.8■■□□□ 1.56
SUMO3-205ENST00000466861 TMC8Q8IU68 726 aa24.8■■□□□ 1.56
SUMO3-205ENST00000466861 RNF135Q8IUD6 432 aa24.8■■□□□ 1.56
SUMO3-205ENST00000466861 TATDN2Q93075 761 aa24.8■■□□□ 1.56
SUMO3-205ENST00000466861 JAKMIP2Q96AA8 810 aa24.8■■□□□ 1.56
SUMO3-205ENST00000466861 C8orf48Q96LL4 319 aa24.8■■□□□ 1.56
SUMO3-205ENST00000466861 FAM81BQ96LP2 452 aa24.8■■□□□ 1.56
SUMO3-205ENST00000466861 MYADMQ96S97 322 aa24.8■■□□□ 1.56
SUMO3-205ENST00000466861 GPR88Q9GZN0 384 aa24.8■■□□□ 1.56
SUMO3-205ENST00000466861 CISHQ9NSE2 258 aa24.8■■□□□ 1.56
SUMO3-205ENST00000466861 EHD2Q9NZN4 543 aa24.8■■□□□ 1.56
SUMO3-205ENST00000466861 IGSF9Q9P2J2 1179 aa24.8■■□□□ 1.56
SUMO3-205ENST00000466861 ZMYM5Q9UJ78 669 aa24.8■■□□□ 1.56
SUMO3-205ENST00000466861 C5orf42Q9H799 3197 aa24.79■■□□□ 1.56
SUMO3-205ENST00000466861 GREB1Q4ZG55 1949 aa24.79■■□□□ 1.56
SUMO3-205ENST00000466861 DLL1O00548 723 aa24.79■■□□□ 1.56
SUMO3-205ENST00000466861 SOAT2O75908 522 aa24.79■■□□□ 1.56
SUMO3-205ENST00000466861 ACOT1Q86TX2 421 aa24.79■■□□□ 1.56
SUMO3-205ENST00000466861 ITFG1Q8TB96 612 aa24.79■■□□□ 1.56
SUMO3-205ENST00000466861 FAM200AQ8TCP9 573 aa24.79■■□□□ 1.56
SUMO3-205ENST00000466861 FGF13Q92913 245 aa24.79■■□□□ 1.56
SUMO3-205ENST00000466861 TRMT2BQ96GJ1 504 aaKnown RBP24.79■■□□□ 1.56
SUMO3-205ENST00000466861 MYRFLQ96LU7 910 aa24.79■■□□□ 1.56
SUMO3-205ENST00000466861 B3GNT5Q9BYG0 378 aa24.79■■□□□ 1.56
SUMO3-205ENST00000466861 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.79■■□□□ 1.56
SUMO3-205ENST00000466861 UXTQ9UBK9 157 aaPredicted RBP24.79■■□□□ 1.56
SUMO3-205ENST00000466861 SOBPA7XYQ1 873 aa24.78■■□□□ 1.56
SUMO3-205ENST00000466861 NOL4O94818 638 aa24.78■■□□□ 1.56
SUMO3-205ENST00000466861 BDNFP23560 247 aa24.78■■□□□ 1.56
SUMO3-205ENST00000466861 CDC25CP30307 473 aa24.78■■□□□ 1.56
SUMO3-205ENST00000466861 MYL5Q02045 173 aa24.78■■□□□ 1.56
SUMO3-205ENST00000466861 GCNT1Q02742 428 aa24.78■■□□□ 1.56
SUMO3-205ENST00000466861 TAF12Q16514 161 aa24.78■■□□□ 1.56
SUMO3-205ENST00000466861 SLC5A9Q2M3M2 681 aa24.78■■□□□ 1.56
SUMO3-205ENST00000466861 C11orf57Q6ZUT1 292 aaPredicted RBP24.78■■□□□ 1.56
SUMO3-205ENST00000466861 CREBRFQ8IUR6 639 aa24.78■■□□□ 1.56
SUMO3-205ENST00000466861 NPAS3Q8IXF0 933 aa24.78■■□□□ 1.56
SUMO3-205ENST00000466861 WHAMMQ8TF30 809 aa24.78■■□□□ 1.56
SUMO3-205ENST00000466861 BPIFA3Q9BQP9 254 aa24.78■■□□□ 1.56
SUMO3-205ENST00000466861 TUBGCP2Q9BSJ2 902 aa24.78■■□□□ 1.56
SUMO3-205ENST00000466861 SAMSN1Q9NSI8 373 aaKnown RBP24.78■■□□□ 1.56
SUMO3-205ENST00000466861 DENND4CQ5VZ89 1909 aa24.77■■□□□ 1.56
SUMO3-205ENST00000466861 VCANP13611 3396 aa24.77■■□□□ 1.56
SUMO3-205ENST00000466861 MYH10P35580 1976 aa24.77■■□□□ 1.56
SUMO3-205ENST00000466861 KCNJ18B7U540 433 aa24.77■■□□□ 1.56
SUMO3-205ENST00000466861 ALADP13716 330 aa24.77■■□□□ 1.56
SUMO3-205ENST00000466861 ANXA13P27216 316 aa24.77■■□□□ 1.56
SUMO3-205ENST00000466861 KCNJ12Q14500 433 aa24.77■■□□□ 1.56
SUMO3-205ENST00000466861 DDR2Q16832 855 aa24.77■■□□□ 1.56
SUMO3-205ENST00000466861 CCDC142Q17RM4 750 aa24.77■■□□□ 1.56
SUMO3-205ENST00000466861 TCP11X2Q5H9J9 407 aa24.77■■□□□ 1.56
SUMO3-205ENST00000466861 CDKAL1Q5VV42 579 aa24.77■■□□□ 1.56
SUMO3-205ENST00000466861 GBP6Q6ZN66 633 aa24.77■■□□□ 1.56
SUMO3-205ENST00000466861 ENOSF1Q7L5Y1 443 aa24.77■■□□□ 1.56
SUMO3-205ENST00000466861 HS6ST3Q8IZP7 471 aa24.77■■□□□ 1.56
SUMO3-205ENST00000466861 SMARCD1Q96GM5 515 aa24.77■■□□□ 1.56
SUMO3-205ENST00000466861 HNRNPABQ99729 332 aaKnown RBP24.77■■□□□ 1.56
SUMO3-205ENST00000466861 LPIN3Q9BQK8 851 aa24.77■■□□□ 1.56
SUMO3-205ENST00000466861 HMGXB4Q9UGU5 601 aa24.77■■□□□ 1.56
SUMO3-205ENST00000466861 BDP1A6H8Y1 2624 aa24.76■■□□□ 1.55
SUMO3-205ENST00000466861 ANHXE9PGG2 379 aa24.76■■□□□ 1.55
SUMO3-205ENST00000466861 MYL4P12829 197 aa24.76■■□□□ 1.55
SUMO3-205ENST00000466861 HMGA1P17096 107 aaKnown RBP24.76■■□□□ 1.55
SUMO3-205ENST00000466861 CD58P19256 250 aa24.76■■□□□ 1.55
SUMO3-205ENST00000466861 GRIK1P39086 918 aa24.76■■□□□ 1.55
SUMO3-205ENST00000466861 VWA3BQ502W6 1294 aa24.76■■□□□ 1.55
SUMO3-205ENST00000466861 MTSS1LQ765P7 747 aa24.76■■□□□ 1.55
SUMO3-205ENST00000466861 FAM35AQ86V20 835 aa24.76■■□□□ 1.55
SUMO3-205ENST00000466861 SCN4BQ8IWT1 228 aa24.76■■□□□ 1.55
SUMO3-205ENST00000466861 FUKQ8N0W3 1084 aa24.76■■□□□ 1.55
SUMO3-205ENST00000466861 UBR7Q8N806 425 aa24.76■■□□□ 1.55
SUMO3-205ENST00000466861 GIPC2Q8TF65 315 aa24.76■■□□□ 1.55
SUMO3-205ENST00000466861 TMEM176AQ96HP8 235 aa24.76■■□□□ 1.55
SUMO3-205ENST00000466861 INTS2Q9H0H0 1204 aaKnown RBP24.76■■□□□ 1.55
SUMO3-205ENST00000466861 NDST4Q9H3R1 872 aa24.76■■□□□ 1.55
SUMO3-205ENST00000466861 GCNT4Q9P109 453 aa24.76■■□□□ 1.55
SUMO3-205ENST00000466861 SLC38A8A6NNN8 435 aa24.75■■□□□ 1.55
SUMO3-205ENST00000466861 PI4K2BG5E9Z4 385 aa24.75■■□□□ 1.55
SUMO3-205ENST00000466861 MOSPD3O75425 235 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms