RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 A0A0B4J269 797 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 NPHP3-ACAD11A0A0J9YXS1 232 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 UPK3BL1B0FP48 263 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 UPK3BL2E5RIL1 263 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 CYB561D2O14569 222 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 OGTO15294 1046 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 PIGRP01833 764 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 ENGP17813 658 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 P2RY2P41231 377 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 PTGER3P43115 390 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 MATR3P43243 847 aaKnown RBP eCLIP12.8□□□□□ -0.36
HCFC1-204ENST00000461098 TRAPPC10P48553 1259 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 SMTNP53814 917 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 SLC12A3P55017 1021 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 ZXDBP98169 803 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 FAM160A1Q05DH4 1040 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 MESP2Q0VG99 397 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 LMAN2Q12907 356 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 SAFBQ15424 915 aaKnown RBP eCLIP12.8□□□□□ -0.36
HCFC1-204ENST00000461098 CRY1Q16526 586 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 C2orf27AQ580R0 203 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 ARSHQ5FYA8 562 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 HYIQ5T013 277 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 SLC39A4Q6P5W5 647 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 PROSER1Q86XN7 944 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 SFTPA1Q8IWL2 248 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 SYT2Q8N9I0 419 aaPredicted RBP12.8□□□□□ -0.36
HCFC1-204ENST00000461098 LRRC15Q8TF66 581 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 RLN3Q8WXF3 142 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 MRPS31Q92665 395 aaKnown RBP12.8□□□□□ -0.36
HCFC1-204ENST00000461098 ATP2A3Q93084 1043 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 MYRFLQ96LU7 910 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 PNMA5Q96PV4 448 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 CCSER1Q9C0I3 900 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 GCNT4Q9P109 453 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 MBD1Q9UIS9 605 aaPredicted RBP12.8□□□□□ -0.36
HCFC1-204ENST00000461098 DSEQ9UL01 958 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 MMP17Q9ULZ9 603 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 PCDHB6Q9Y5E3 794 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 STK24Q9Y6E0 443 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 ADAMTS9Q9P2N4 1935 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 PLXND1Q9Y4D7 1925 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 GON4LQ3T8J9 2241 aa12.8□□□□□ -0.36
HCFC1-204ENST00000461098 TNFRSF10BO14763 440 aa12.79□□□□□ -0.36
HCFC1-204ENST00000461098 NOL4O94818 638 aa12.79□□□□□ -0.36
HCFC1-204ENST00000461098 CSH1P0DML2 217 aa12.79□□□□□ -0.36
HCFC1-204ENST00000461098 CSH2P0DML3 217 aa12.79□□□□□ -0.36
HCFC1-204ENST00000461098 MAPK8P45983 427 aa12.79□□□□□ -0.36
HCFC1-204ENST00000461098 SEC13P55735 322 aa12.79□□□□□ -0.36
HCFC1-204ENST00000461098 ANAPC15P60006 121 aa12.79□□□□□ -0.36
HCFC1-204ENST00000461098 SIM1P81133 766 aaPredicted RBP12.79□□□□□ -0.36
HCFC1-204ENST00000461098 KYAT1Q16773 422 aa12.79□□□□□ -0.36
HCFC1-204ENST00000461098 DDR2Q16832 855 aa12.79□□□□□ -0.36
HCFC1-204ENST00000461098 ZC2HC1CQ53FD0 456 aaPredicted RBP12.79□□□□□ -0.36
HCFC1-204ENST00000461098 PEAR1Q5VY43 1037 aaPredicted RBP12.79□□□□□ -0.36
HCFC1-204ENST00000461098 KRT79Q5XKE5 535 aa12.79□□□□□ -0.36
HCFC1-204ENST00000461098 SLC23A3Q6PIS1 610 aa12.79□□□□□ -0.36
HCFC1-204ENST00000461098 CD302Q8IX05 232 aa12.79□□□□□ -0.36
HCFC1-204ENST00000461098 EFCAB13Q8IY85 973 aa12.79□□□□□ -0.36
HCFC1-204ENST00000461098 CHCHD4Q8N4Q1 142 aa12.79□□□□□ -0.36
HCFC1-204ENST00000461098 CCDC33Q8N5R6 958 aa12.79□□□□□ -0.36
HCFC1-204ENST00000461098 EXOC4Q96A65 974 aa12.79□□□□□ -0.36
HCFC1-204ENST00000461098 TRMT2BQ96GJ1 504 aaKnown RBP12.79□□□□□ -0.36
HCFC1-204ENST00000461098 PYM1Q9BRP8 204 aaKnown RBP12.79□□□□□ -0.36
HCFC1-204ENST00000461098 PI4K2AQ9BTU6 479 aa12.79□□□□□ -0.36
HCFC1-204ENST00000461098 TMEM206Q9H813 350 aa12.79□□□□□ -0.36
HCFC1-204ENST00000461098 FSCN3Q9NQT6 498 aa12.79□□□□□ -0.36
HCFC1-204ENST00000461098 KCNG1Q9UIX4 513 aa12.79□□□□□ -0.36
HCFC1-204ENST00000461098 MAGED2Q9UNF1 606 aaPredicted RBP12.79□□□□□ -0.36
HCFC1-204ENST00000461098 DERAQ9Y315 318 aa12.79□□□□□ -0.36
HCFC1-204ENST00000461098 TCHHQ07283 1943 aa12.79□□□□□ -0.36
HCFC1-204ENST00000461098 PCDH15Q96QU1 1955 aa12.79□□□□□ -0.36
HCFC1-204ENST00000461098 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.78□□□□□ -0.36
HCFC1-204ENST00000461098 C2orf78A6NCI8 922 aa12.78□□□□□ -0.36
HCFC1-204ENST00000461098 TCF3P15923 654 aa12.78□□□□□ -0.36
HCFC1-204ENST00000461098 IFNAR2P48551 515 aa12.78□□□□□ -0.36
HCFC1-204ENST00000461098 LIG4P49917 911 aa12.78□□□□□ -0.36
HCFC1-204ENST00000461098 TMEM132DQ14C87 1099 aa12.78□□□□□ -0.36
HCFC1-204ENST00000461098 RAB44Q7Z6P3 723 aaPredicted RBP12.78□□□□□ -0.36
HCFC1-204ENST00000461098 SYT12Q8IV01 421 aa12.78□□□□□ -0.36
HCFC1-204ENST00000461098 TMEFF1Q8IYR6 380 aa12.78□□□□□ -0.36
HCFC1-204ENST00000461098 THEM5Q8N1Q8 247 aa12.78□□□□□ -0.36
HCFC1-204ENST00000461098 ARL14EPQ8N8R7 260 aaPredicted RBP12.78□□□□□ -0.36
HCFC1-204ENST00000461098 FBXO18Q8NFZ0 1043 aa12.78□□□□□ -0.36
HCFC1-204ENST00000461098 SH3RF2Q8TEC5 729 aa12.78□□□□□ -0.36
HCFC1-204ENST00000461098 FAM212AQ96EL1 285 aa12.78□□□□□ -0.36
HCFC1-204ENST00000461098 BICD1Q96G01 975 aa12.78□□□□□ -0.36
HCFC1-204ENST00000461098 C8orf76Q96K31 380 aa12.78□□□□□ -0.36
HCFC1-204ENST00000461098 FIZ1Q96SL8 496 aa12.78□□□□□ -0.36
HCFC1-204ENST00000461098 PKMYT1Q99640 499 aa12.78□□□□□ -0.36
HCFC1-204ENST00000461098 NUSAP1Q9BXS6 441 aaKnown RBP12.78□□□□□ -0.36
HCFC1-204ENST00000461098 SLC32A1Q9H598 525 aa12.78□□□□□ -0.36
HCFC1-204ENST00000461098 PILRBQ9UKJ0 227 aa12.78□□□□□ -0.36
HCFC1-204ENST00000461098 PCDHB5Q9Y5E4 795 aa12.78□□□□□ -0.36
HCFC1-204ENST00000461098 HELZP42694 1942 aaKnown RBP12.78□□□□□ -0.36
HCFC1-204ENST00000461098 HNRNPDLO14979 420 aaKnown RBP12.77□□□□□ -0.37
HCFC1-204ENST00000461098 PRPF40AO75400 957 aaKnown RBP12.77□□□□□ -0.37
HCFC1-204ENST00000461098 USP17L7P0C7H9 530 aa12.77□□□□□ -0.37
HCFC1-204ENST00000461098 CYP2F1P24903 491 aa12.77□□□□□ -0.37
HCFC1-204ENST00000461098 TAF6P49848 677 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms