RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 PDE1BQ01064 536 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 NFIAQ12857 509 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 MSLNQ13421 630 aaPredicted RBP14.62□□□□□ -0.07
VPS52-212ENST00000445902 PDSS2Q86YH6 399 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 KATNAL2Q8IYT4 538 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 LENG1Q96BZ8 264 aaPredicted RBP14.62□□□□□ -0.07
VPS52-212ENST00000445902 AGBL1Q96MI9 1066 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 RILPQ96NA2 401 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 PLEKHG4BQ96PX9 1271 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 PHF12Q96QT6 1004 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 COL24A1Q17RW2 1714 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 CAPN14A8MX76 684 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 PSTPIP1O43586 416 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 ATP6V1G1O75348 118 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 FAM155BO75949 473 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 PDE5AO76074 875 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 FOSP01100 380 aaPredicted RBP14.62□□□□□ -0.07
VPS52-212ENST00000445902 IMPDH2P12268 514 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 NRLP54845 237 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 GDF10P55107 478 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 RPL7AP62424 266 aaKnown RBP14.62□□□□□ -0.07
VPS52-212ENST00000445902 PTK7Q13308 1070 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 GRAPQ13588 217 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 CDHR3Q6ZTQ4 885 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.62□□□□□ -0.07
VPS52-212ENST00000445902 HAUS6Q7Z4H7 955 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 POU5F2Q8N7G0 328 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 ATP11CQ8NB49 1132 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 EXD1Q8NHP7 514 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 GRAPLQ8TC17 118 aaPredicted RBP14.62□□□□□ -0.07
VPS52-212ENST00000445902 RAB20Q9NX57 234 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 ADAMTS6Q9UKP5 1117 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 TNRC6CQ9HCJ0 1690 aaKnown RBP14.62□□□□□ -0.07
VPS52-212ENST00000445902 FOCADQ5VW36 1801 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.61□□□□□ -0.07
VPS52-212ENST00000445902 PHBP35232 272 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 PEX3P56589 373 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 MAP3K10Q02779 954 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 FAAP100Q0VG06 881 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 R3HDM1Q15032 1099 aaKnown RBP14.61□□□□□ -0.07
VPS52-212ENST00000445902 DLGAP5Q15398 846 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 MMEL1Q495T6 779 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 SLF2Q8IX21 1173 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 FBXL13Q8NEE6 735 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 SNRNP27Q8WVK2 155 aaKnown RBP14.61□□□□□ -0.07
VPS52-212ENST00000445902 MKL1Q969V6 931 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 ZNF577Q9BSK1 485 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 TMEM206Q9H813 350 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 RIMBP2O15034 1052 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 GDF11O95390 407 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 PENKP01210 267 aaPredicted RBP14.61□□□□□ -0.07
VPS52-212ENST00000445902 AQP5P55064 265 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 TMEM62Q0P6H9 643 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 ACBD5Q5T8D3 534 aaPredicted RBP14.61□□□□□ -0.07
VPS52-212ENST00000445902 CES4AQ5XG92 561 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 DHDDSQ86SQ9 333 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.61□□□□□ -0.07
VPS52-212ENST00000445902 SLITRK1Q96PX8 696 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 SSU72Q9NP77 194 aaKnown RBP14.61□□□□□ -0.07
VPS52-212ENST00000445902 IL1RAPL1Q9NZN1 696 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.61□□□□□ -0.07
VPS52-212ENST00000445902 IVNS1ABPQ9Y6Y0 642 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 CYB561D2O14569 222 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 ETV4P43268 484 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 TMPRSS15P98073 1019 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 MAMLD1Q13495 774 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 CCDC142Q17RM4 750 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 RALGPS1Q5JS13 557 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 CCDC174Q6PII3 467 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 RBM44Q6ZP01 1051 aaKnown RBP14.61□□□□□ -0.07
VPS52-212ENST00000445902 LARGE2Q8N3Y3 721 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 STKLD1Q8NE28 680 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 GDPD5Q8WTR4 605 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 ACSS3Q9H6R3 686 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 CYP4F11Q9HBI6 524 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 AVENQ9NQS1 362 aaPredicted RBP14.61□□□□□ -0.07
VPS52-212ENST00000445902 TAGLN3Q9UI15 199 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 TBC1D30Q9Y2I9 924 aa14.61□□□□□ -0.07
VPS52-212ENST00000445902 VCLP18206 1134 aa14.6□□□□□ -0.07
VPS52-212ENST00000445902 BST1Q10588 318 aa14.6□□□□□ -0.07
VPS52-212ENST00000445902 TRIP10Q15642 601 aa14.6□□□□□ -0.07
VPS52-212ENST00000445902 SPOPLQ6IQ16 392 aa14.6□□□□□ -0.07
VPS52-212ENST00000445902 FBXL19Q6PCT2 694 aa14.6□□□□□ -0.07
VPS52-212ENST00000445902 OGFOD1Q8N543 542 aa14.6□□□□□ -0.07
VPS52-212ENST00000445902 FAM172AQ8WUF8 416 aa14.6□□□□□ -0.07
VPS52-212ENST00000445902 EBF4Q9BQW3 602 aa14.6□□□□□ -0.07
VPS52-212ENST00000445902 IQCGQ9H095 443 aaKnown RBP14.6□□□□□ -0.07
VPS52-212ENST00000445902 S100A14Q9HCY8 104 aa14.6□□□□□ -0.07
VPS52-212ENST00000445902 SHOC2Q9UQ13 582 aa14.6□□□□□ -0.07
VPS52-212ENST00000445902 IKBKGQ9Y6K9 419 aa14.6□□□□□ -0.07
VPS52-212ENST00000445902 RBBP6Q7Z6E9 1792 aaKnown RBP14.6□□□□□ -0.07
VPS52-212ENST00000445902 MYOCOSA0A1B0GUC4 107 aa14.6□□□□□ -0.07
VPS52-212ENST00000445902 C6orf222P0C671 652 aaPredicted RBP14.6□□□□□ -0.07
VPS52-212ENST00000445902 UQCRBP14927 111 aa14.6□□□□□ -0.07
VPS52-212ENST00000445902 TMED1Q13445 227 aa14.6□□□□□ -0.07
VPS52-212ENST00000445902 PDK3Q15120 406 aa14.6□□□□□ -0.07
VPS52-212ENST00000445902 SV2AQ7L0J3 742 aa14.6□□□□□ -0.07
VPS52-212ENST00000445902 MON1BQ7L1V2 547 aa14.6□□□□□ -0.07
VPS52-212ENST00000445902 AMIGO3Q86WK7 504 aa14.6□□□□□ -0.07
VPS52-212ENST00000445902 IGDCC3Q8IVU1 814 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms