RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 TMEM161AQ9NX61 479 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 DCTN4Q9UJW0 460 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 PCDHB2Q9Y5E7 798 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 CCDC163A0A0D9SF12 145 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 C9IYK1 514 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 ANKRD63C9JTQ0 380 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 CLIC2O15247 247 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 OGTO15294 1046 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 EXOC3O60645 756 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 CPNE3O75131 537 aaKnown RBP6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 ALX3O95076 343 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 FGFR1OPO95684 399 aaKnown RBP6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 PDGFRBP09619 1106 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 CCDC192P0DO97 292 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 ATP2A2P16615 1042 aaKnown RBP6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 GARTP22102 1010 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 HOXA11P31270 313 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 CD68P34810 354 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 PIK3CAP42336 1068 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 CASP2P42575 452 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 PRCPP42785 496 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 OSTNP61366 133 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 MCL1Q07820 350 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 PAK1Q13153 545 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 SUZ12Q15022 739 aaKnown RBP6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 BRD3Q15059 726 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 BMT2Q1RMZ1 405 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 TCTN1Q2MV58 587 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 COBLL1Q53SF7 1204 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 C9orf50Q5SZB4 431 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 UBXN11Q5T124 520 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 SPOUT1Q5T280 376 aaKnown RBP6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 PEAR1Q5VY43 1037 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 GLB1LQ6UWU2 654 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 C16orf59Q7L2K0 433 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 RTN4RL1Q86UN2 441 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 SMYD4Q8IYR2 804 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 TDHQ8IZJ6 230 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 GPD1LQ8N335 351 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 GLIS3Q8NEA6 775 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 NELFBQ8WX92 580 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 P2RX5Q93086 422 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 DHTKD1Q96HY7 919 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 ZBTB45Q96K62 511 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 RMDN2Q96LZ7 410 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 ACAP3Q96P50 834 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 FAM193BQ96PV7 902 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 YME1L1Q96TA2 773 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 STRA6Q9BX79 667 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 EIF2AQ9BY44 585 aaKnown RBP6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 PCIF1Q9H4Z3 704 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 AKTIPQ9H8T0 292 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 RPF1Q9H9Y2 349 aaKnown RBP6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 KIAA1586Q9HCI6 787 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 CD248Q9HCU0 757 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 AGO2Q9UKV8 859 aaKnown RBP6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 CTNND2Q9UQB3 1225 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 IPPQ9Y573 584 aa6.65□□□□□ -1.34
ECHDC1-208ENST00000436638 PCNTO95613 3336 aa6.65□□□□□ -1.35
ECHDC1-208ENST00000436638 LTBP2Q14767 1821 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 SCN5AQ14524 2016 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 A0A0B4J269 797 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 ANKRD33BA6NCL7 494 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 ZNF233A6NK53 670 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 TBKBP1A7MCY6 615 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 TMCO5BA8MYB1 307 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 H3BRJ5 948 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 PDXKO00764 312 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 CETN3O15182 167 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 XPOTO43592 962 aaKnown RBP6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 EXTL3O43909 919 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 ADAM23O75077 832 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 ZNF623O75123 536 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 HNRNPCP07910 306 aaKnown RBP eCLIP6.64□□□□□ -1.353e-6■□□□□ 11
ECHDC1-208ENST00000436638 CLTAP09496 248 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 CCNE1P24864 410 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 NOS3P29474 1203 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 CYP2J2P51589 502 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 SH3BGRP55822 239 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 FAM189BP81408 668 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 DEFB103AP81534 67 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 RNASELQ05823 741 aaKnown RBP6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 LRRC63Q05C16 580 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 PPP2R3AQ06190 1150 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 ADAM9Q13443 819 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 SURF1Q15526 300 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 STX1AQ16623 288 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 TMC7Q7Z402 723 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 MRPL10Q7Z7H8 261 aaKnown RBP6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 USP37Q86T82 979 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 HERC6Q8IVU3 1022 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 SUGP1Q8IWZ8 645 aaKnown RBP6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 CD302Q8IX05 232 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 GALNT12Q8IXK2 581 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 ADSSL1Q8N142 457 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 XXYLT1Q8NBI6 393 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 LINC01599Q8WXQ3 324 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms