RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 PHKA1P46020 1223 aa6.25□□□□□ -1.41
HMGB3P5-201ENST00000428894 PIK3CGP48736 1102 aa6.25□□□□□ -1.41
HMGB3P5-201ENST00000428894 FXR1P51114 621 aaKnown RBP eCLIP6.25□□□□□ -1.41
HMGB3P5-201ENST00000428894 ZNF135P52742 658 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P5-201ENST00000428894 HABP2Q14520 560 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P5-201ENST00000428894 UROC1Q96N76 676 aa6.25□□□□□ -1.41
HMGB3P5-201ENST00000428894 ETAA1Q9NY74 926 aa6.25□□□□□ -1.41
HMGB3P5-201ENST00000428894 TNFRSF18Q9Y5U5 241 aa6.25□□□□□ -1.41
HMGB3P5-201ENST00000428894 ARHGEF17Q96PE2 2063 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 A0A0B4J269 797 aa6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 SLC16A6O15403 523 aa6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 DTNBO60941 627 aa6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 IL33O95760 270 aa6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 CHEK2O96017 543 aa6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 FTH1P19P0C7X4 201 aa6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 NXPH1P58417 271 aa6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 NHLH1Q02575 133 aa6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 ITIH3Q06033 890 aa6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 NOGQ13253 232 aa6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 TUBB3Q13509 450 aa6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 TXNRD1Q16881 649 aa6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 BRDTQ58F21 947 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 USP45Q70EL2 814 aa6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 HEATR3Q7Z4Q2 680 aa6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 FAM90A1Q86YD7 464 aa6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 PRR18Q8N4B5 295 aa6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 RGMAQ96B86 450 aa6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 CNPPD1Q9BV87 410 aa6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 WDCPQ9H6R7 721 aa6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 GPR35Q9HC97 309 aa6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 CPNE5Q9HCH3 593 aa6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 ARPP21Q9UBL0 812 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 ABCF2Q9UG63 623 aa6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 AGAP1Q9UPQ3 857 aa6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 NR2E3Q9Y5X4 410 aa6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 SPATA31A3Q5VYP0 1347 aa6.24□□□□□ -1.41
HMGB3P5-201ENST00000428894 PIK3R4Q99570 1358 aa6.23□□□□□ -1.41
HMGB3P5-201ENST00000428894 PLEKHG1Q9ULL1 1385 aa6.23□□□□□ -1.41
HMGB3P5-201ENST00000428894 TRIAP1O43715 76 aa6.23□□□□□ -1.41
HMGB3P5-201ENST00000428894 VPS4BO75351 444 aa6.23□□□□□ -1.41
HMGB3P5-201ENST00000428894 PROP1O75360 226 aa6.23□□□□□ -1.41
HMGB3P5-201ENST00000428894 POU2F2P09086 479 aa6.23□□□□□ -1.41
HMGB3P5-201ENST00000428894 ELFN1P0C7U0 828 aa6.23□□□□□ -1.41
HMGB3P5-201ENST00000428894 RARBP10826 455 aa6.23□□□□□ -1.41
HMGB3P5-201ENST00000428894 HK3P52790 923 aa6.23□□□□□ -1.41
HMGB3P5-201ENST00000428894 KIF22Q14807 665 aa6.23□□□□□ -1.41
HMGB3P5-201ENST00000428894 TSTD2Q5T7W7 516 aa6.23□□□□□ -1.41
HMGB3P5-201ENST00000428894 TAF2Q6P1X5 1199 aa6.23□□□□□ -1.41
HMGB3P5-201ENST00000428894 PSD4Q8NDX1 1056 aa6.23□□□□□ -1.41
HMGB3P5-201ENST00000428894 TNPO1Q92973 898 aaKnown RBP6.23□□□□□ -1.41
HMGB3P5-201ENST00000428894 TIMP4Q99727 224 aa6.23□□□□□ -1.41
HMGB3P5-201ENST00000428894 SMOC2Q9H3U7 446 aa6.23□□□□□ -1.41
HMGB3P5-201ENST00000428894 MRPS18AQ9NVS2 196 aaKnown RBP6.23□□□□□ -1.41
HMGB3P5-201ENST00000428894 TRPC5Q9UL62 973 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P5-201ENST00000428894 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P5-201ENST00000428894 LUC7L2Q9Y383 392 aaKnown RBP6.23□□□□□ -1.41
HMGB3P5-201ENST00000428894 ENTPD2Q9Y5L3 495 aa6.23□□□□□ -1.41
HMGB3P5-201ENST00000428894 MROH1Q8NDA8 1641 aa6.23□□□□□ -1.41
HMGB3P5-201ENST00000428894 ERBINQ96RT1 1412 aa6.23□□□□□ -1.41
HMGB3P5-201ENST00000428894 SETD5Q9C0A6 1442 aa6.23□□□□□ -1.41
HMGB3P5-201ENST00000428894 KAT6AQ92794 2004 aa6.23□□□□□ -1.41
HMGB3P5-201ENST00000428894 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P5-201ENST00000428894 WDR27A2RRH5 827 aa6.22□□□□□ -1.41
HMGB3P5-201ENST00000428894 KIF20AO95235 890 aa6.22□□□□□ -1.41
HMGB3P5-201ENST00000428894 FTLP02792 175 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P5-201ENST00000428894 CHRM3P20309 590 aa6.22□□□□□ -1.41
HMGB3P5-201ENST00000428894 NDUFV1P49821 464 aa6.22□□□□□ -1.41
HMGB3P5-201ENST00000428894 PTPROQ16827 1216 aa6.22□□□□□ -1.41
HMGB3P5-201ENST00000428894 TMEM240Q5SV17 173 aa6.22□□□□□ -1.41
HMGB3P5-201ENST00000428894 BRINP3Q76B58 766 aa6.22□□□□□ -1.41
HMGB3P5-201ENST00000428894 ZBTB46Q86UZ6 589 aa6.22□□□□□ -1.41
HMGB3P5-201ENST00000428894 CPA6Q8N4T0 437 aa6.22□□□□□ -1.41
HMGB3P5-201ENST00000428894 SH2D3CQ8N5H7 860 aa6.22□□□□□ -1.41
HMGB3P5-201ENST00000428894 AMBRA1Q9C0C7 1298 aa6.22□□□□□ -1.41
HMGB3P5-201ENST00000428894 SIK2Q9H0K1 926 aa6.22□□□□□ -1.41
HMGB3P5-201ENST00000428894 KLC4Q9NSK0 619 aa6.22□□□□□ -1.41
HMGB3P5-201ENST00000428894 RRP7BPQ9NSQ0 103 aa6.22□□□□□ -1.41
HMGB3P5-201ENST00000428894 LMBRD1Q9NUN5 540 aa6.22□□□□□ -1.41
HMGB3P5-201ENST00000428894 FEZ2Q9UHY8 353 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P5-201ENST00000428894 ST3GAL5Q9UNP4 418 aa6.22□□□□□ -1.41
HMGB3P5-201ENST00000428894 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.22□□□□□ -1.41
HMGB3P5-201ENST00000428894 RGS12O14924 1447 aa6.22□□□□□ -1.41
HMGB3P5-201ENST00000428894 MYOM3Q5VTT5 1437 aa6.22□□□□□ -1.41
HMGB3P5-201ENST00000428894 ADGRA2Q96PE1 1338 aa6.22□□□□□ -1.41
HMGB3P5-201ENST00000428894 KIF15Q9NS87 1388 aa6.21□□□□□ -1.41
HMGB3P5-201ENST00000428894 EP400Q96L91 3159 aa6.21□□□□□ -1.41
HMGB3P5-201ENST00000428894 LINC00473A8K010 186 aa6.21□□□□□ -1.42
HMGB3P5-201ENST00000428894 VWC2LB2RUY7 222 aa6.21□□□□□ -1.42
HMGB3P5-201ENST00000428894 RBMXL2O75526 392 aaKnown RBP6.21□□□□□ -1.42
HMGB3P5-201ENST00000428894 GPD1P21695 349 aa6.21□□□□□ -1.42
HMGB3P5-201ENST00000428894 MAP2K6P52564 334 aa6.21□□□□□ -1.42
HMGB3P5-201ENST00000428894 ZKSCAN2Q63HK3 967 aa6.21□□□□□ -1.42
HMGB3P5-201ENST00000428894 CATIPQ7Z7H3 387 aa6.21□□□□□ -1.42
HMGB3P5-201ENST00000428894 HSPBAP1Q96EW2 488 aa6.21□□□□□ -1.42
HMGB3P5-201ENST00000428894 OSBPL9Q96SU4 736 aa6.21□□□□□ -1.42
HMGB3P5-201ENST00000428894 TPSD1Q9BZJ3 242 aa6.21□□□□□ -1.42
HMGB3P5-201ENST00000428894 MRPL46Q9H2W6 279 aaKnown RBP6.21□□□□□ -1.42
HMGB3P5-201ENST00000428894 ZDHHC8Q9ULC8 765 aa6.21□□□□□ -1.42
HMGB3P5-201ENST00000428894 ADGRB3O60242 1522 aa6.2□□□□□ -1.42
HMGB3P5-201ENST00000428894 DIP2AQ14689 1571 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms