RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 CMTM8Q8IZV2 173 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 CELF5Q8N6W0 485 aaKnown RBP9.94□□□□□ -0.82
NUP50-206ENST00000422489 GOLGA5Q8TBA6 731 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 KBTBD7Q8WVZ9 684 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 CLDN23Q96B33 292 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 CYP2S1Q96SQ9 504 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 HINFPQ9BQA5 517 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 C8orf33Q9H7E9 229 aaPredicted RBP9.94□□□□□ -0.82
NUP50-206ENST00000422489 TRPV5Q9NQA5 729 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 GTSE1Q9NYZ3 720 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 CGNQ9P2M7 1197 aaKnown RBP9.94□□□□□ -0.82
NUP50-206ENST00000422489 USP25Q9UHP3 1055 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 ATP6V1DQ9Y5K8 247 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 TRIP11Q15643 1979 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 ZNF318Q5VUA4 2279 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 SHISA7A6NL88 538 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 A8MXQ7 604 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 RPN1P04843 607 aaKnown RBP9.93□□□□□ -0.82
NUP50-206ENST00000422489 ANXA13P27216 316 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 RPS9P46781 194 aaKnown RBP9.93□□□□□ -0.82
NUP50-206ENST00000422489 TNK2Q07912 1038 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 FCHO2Q0JRZ9 810 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 MTAPQ13126 283 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 MAPRE1Q15691 268 aaKnown RBP9.93□□□□□ -0.82
NUP50-206ENST00000422489 MDH1BQ5I0G3 518 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 CEP135Q66GS9 1140 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 CC2D1AQ6P1N0 951 aaPredicted RBP9.93□□□□□ -0.82
NUP50-206ENST00000422489 FAM171BQ6P995 826 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 ZC3H14Q6PJT7 736 aaKnown RBP9.93□□□□□ -0.82
NUP50-206ENST00000422489 TMEM150AQ86TG1 271 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 MON1AQ86VX9 555 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 FSIP1Q8NA03 581 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 SPATA18Q8TC71 538 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 PLEKHO2Q8TD55 490 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 ATRIPQ8WXE1 791 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 USP13Q92995 863 aaPredicted RBP9.93□□□□□ -0.82
NUP50-206ENST00000422489 MYLPFQ96A32 169 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 ELMO3Q96BJ8 720 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 PKMYT1Q99640 499 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 SCAND2PQ9GZW5 306 aaPredicted RBP9.93□□□□□ -0.82
NUP50-206ENST00000422489 SEMA4AQ9H3S1 761 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 ABCB6Q9NP58 842 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 CRTAC1Q9NQ79 661 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 RBM12Q9NTZ6 932 aaKnown RBP9.93□□□□□ -0.82
NUP50-206ENST00000422489 TDP1Q9NUW8 608 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 OBP2AQ9NY56 170 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 UXTQ9UBK9 157 aaPredicted RBP9.93□□□□□ -0.82
NUP50-206ENST00000422489 FBXO4Q9UKT5 387 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 MYH11P35749 1972 aa9.93□□□□□ -0.82
NUP50-206ENST00000422489 CITO14578 2027 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 ZDBF2Q9HCK1 2354 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 LRRIQ3A6PVS8 624 aaPredicted RBP9.92□□□□□ -0.82
NUP50-206ENST00000422489 SPECC1L-ADORA2AF8WAN1 911 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 ARNTLO00327 626 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 CALUO43852 315 aaPredicted RBP9.92□□□□□ -0.82
NUP50-206ENST00000422489 KINO60870 393 aaKnown RBP9.92□□□□□ -0.82
NUP50-206ENST00000422489 NOL4O94818 638 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 KIF20AO95235 890 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 ABL1P00519 1130 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 NR3C1P04150 777 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 CKMP06732 381 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 FAM163BP0C2L3 166 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 CHRNB1P11230 501 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 PTPN1P18031 435 aaKnown RBP9.92□□□□□ -0.82
NUP50-206ENST00000422489 DDX6P26196 483 aaKnown RBP eCLIP9.92□□□□□ -0.82
NUP50-206ENST00000422489 WEE1P30291 646 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 ATICP31939 592 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 MAGEA11P43364 429 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 CLCN6P51797 869 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 MLLT6P55198 1093 aaPredicted RBP9.92□□□□□ -0.82
NUP50-206ENST00000422489 CDH8P55286 799 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 PLCB2Q00722 1185 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 IFRD2Q12894 506 aaPredicted RBP9.92□□□□□ -0.82
NUP50-206ENST00000422489 LRRC32Q14392 662 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 PON2Q15165 354 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 ITPRIPL2Q3MIP1 535 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 CFAP221Q4G0U5 840 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 TRIM68Q6AZZ1 485 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 LIMS2Q7Z4I7 341 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 C12orf56Q8IXR9 622 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 KIAA0895Q8NCT3 520 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 MYCBPAPQ8TBZ2 947 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 SYAP1Q96A49 352 aaPredicted RBP9.92□□□□□ -0.82
NUP50-206ENST00000422489 FUBP3Q96I24 572 aaKnown RBP eCLIP9.92□□□□□ -0.82
NUP50-206ENST00000422489 MED10Q9BTT4 135 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 GDPD2Q9HCC8 539 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 ZMYM5Q9UJ78 669 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 MAPK8IP1Q9UQF2 711 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 HPSEQ9Y251 543 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 CCL26Q9Y258 94 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 COL4A3Q01955 1670 aa9.92□□□□□ -0.82
NUP50-206ENST00000422489 TRAV19A0A0A6YYK7 116 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 CLDN5O00501 218 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 PDXKO00764 312 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 TACC1O75410 805 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 C4BPAP04003 597 aaKnown RBP9.91□□□□□ -0.82
NUP50-206ENST00000422489 MYL1P05976 194 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 USP17L7P0C7H9 530 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 HDCP19113 662 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 RAP1GAPP47736 663 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms