RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 CST8O60676 142 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 BANF1O75531 89 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 RAD23BP54727 409 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 ATF7IP2Q5U623 682 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 RGS9BPQ6ZS82 235 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 BBS12Q6ZW61 710 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 CDR2LQ86X02 465 aaPredicted RBP16.7■□□□□ 0.26
HOXD3-202ENST00000410016 ECHDC2Q86YB7 292 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 TMEM192Q8IY95 271 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 CPT1BQ92523 772 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 ZNF668Q96K58 619 aaPredicted RBP16.7■□□□□ 0.26
HOXD3-202ENST00000410016 CPXM1Q96SM3 734 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 BCO2Q9BYV7 579 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 C2orf40Q9H1Z8 148 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 ZWILCHQ9H900 591 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 VPS37BQ9H9H4 285 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 NOD2Q9HC29 1040 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 GPRC5DQ9NZD1 345 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 GOLGA8MH3BSY2 632 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 KRT7P08729 469 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 CD48P09326 243 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 NQO1P15559 274 aaKnown RBP16.69■□□□□ 0.26
HOXD3-202ENST00000410016 KDELR1P24390 212 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 POLR2BP30876 1174 aaKnown RBP16.69■□□□□ 0.26
HOXD3-202ENST00000410016 RAP1GAPP47736 663 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 CDH8P55286 799 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 DYNLT1P63172 113 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 MSS51Q4VC12 460 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 ANKRD22Q5VYY1 191 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 DLK2Q6UY11 383 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 CAPN12Q6ZSI9 719 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 ASRGL1Q7L266 308 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 PLPPR4Q7Z2D5 763 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 TMEM130Q8N3G9 435 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 NAT8LQ8N9F0 302 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 FGD4Q96M96 766 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 SDCBP2Q9H190 292 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 SENP1Q9P0U3 644 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 KLHL14Q9P2G3 628 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 PPP1R1BQ9UD71 204 aaPredicted RBP16.69■□□□□ 0.26
HOXD3-202ENST00000410016 SLC24A2Q9UI40 661 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 ZMYND8Q9ULU4 1186 aaPredicted RBP16.69■□□□□ 0.26
HOXD3-202ENST00000410016 TYROBPO43914 113 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 TNNC2P02585 160 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 IQCF3P0C7M6 154 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 CD19P15391 556 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 RPA3P35244 121 aaPredicted RBP16.69■□□□□ 0.26
HOXD3-202ENST00000410016 CTCFP49711 727 aaPredicted RBP16.69■□□□□ 0.26
HOXD3-202ENST00000410016 PSMC1P62191 440 aaKnown RBP16.69■□□□□ 0.26
HOXD3-202ENST00000410016 HIF1AQ16665 826 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 EFHC2Q5JST6 749 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 CELF3Q5SZQ8 465 aaKnown RBP16.69■□□□□ 0.26
HOXD3-202ENST00000410016 FNBP1LQ5T0N5 605 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 PNMA8AQ86V59 439 aaPredicted RBP16.69■□□□□ 0.26
HOXD3-202ENST00000410016 XYLT1Q86Y38 959 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 TRAPPC12Q8WVT3 735 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 SPOCK2Q92563 424 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 ANKRD36BP1Q96IX9 119 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 WDR83Q9BRX9 315 aaKnown RBP16.69■□□□□ 0.26
HOXD3-202ENST00000410016 MINDY3Q9H8M7 445 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 PPCSQ9HAB8 311 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 ARHGEF3Q9NR81 526 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 RABGEF1Q9UJ41 708 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 AGTPBP1Q9UPW5 1226 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 STARD13Q9Y3M8 1113 aa16.69■□□□□ 0.26
HOXD3-202ENST00000410016 A0A1W2PPM1 405 aa16.68■□□□□ 0.26
HOXD3-202ENST00000410016 NDC80O14777 642 aa16.68■□□□□ 0.26
HOXD3-202ENST00000410016 KRT15P19012 456 aa16.68■□□□□ 0.26
HOXD3-202ENST00000410016 RDXP35241 583 aaKnown RBP16.68■□□□□ 0.26
HOXD3-202ENST00000410016 FAM47EQ6ZV65 393 aa16.68■□□□□ 0.26
HOXD3-202ENST00000410016 PCGF5Q86SE9 256 aa16.68■□□□□ 0.26
HOXD3-202ENST00000410016 ANKMY2Q8IV38 441 aa16.68■□□□□ 0.26
HOXD3-202ENST00000410016 C4orf33Q8N1A6 199 aa16.68■□□□□ 0.26
HOXD3-202ENST00000410016 EMC1Q8N766 993 aa16.68■□□□□ 0.26
HOXD3-202ENST00000410016 CMASQ8NFW8 434 aaPredicted RBP16.68■□□□□ 0.26
HOXD3-202ENST00000410016 CXorf38Q8TB03 319 aa16.68■□□□□ 0.26
HOXD3-202ENST00000410016 TWNKQ96RR1 684 aa16.68■□□□□ 0.26
HOXD3-202ENST00000410016 PAIP2Q9BPZ3 127 aaKnown RBP16.68■□□□□ 0.26
HOXD3-202ENST00000410016 FRMD8P1Q9BZ68 369 aaPredicted RBP16.68■□□□□ 0.26
HOXD3-202ENST00000410016 PHACTR1Q9C0D0 580 aa16.68■□□□□ 0.26
HOXD3-202ENST00000410016 SMG5Q9UPR3 1016 aaKnown RBP16.68■□□□□ 0.26
HOXD3-202ENST00000410016 WDR90Q96KV7 1748 aa16.68■□□□□ 0.26
HOXD3-202ENST00000410016 ERBB2P04626 1255 aa16.67■□□□□ 0.26
HOXD3-202ENST00000410016 CXCL8P10145 99 aa16.67■□□□□ 0.26
HOXD3-202ENST00000410016 RPL22P35268 128 aaKnown RBP16.67■□□□□ 0.26
HOXD3-202ENST00000410016 MYO1EQ12965 1108 aa16.67■□□□□ 0.26
HOXD3-202ENST00000410016 DNAJC3Q13217 504 aa16.67■□□□□ 0.26
HOXD3-202ENST00000410016 SPARCL1Q14515 664 aa16.67■□□□□ 0.26
HOXD3-202ENST00000410016 SLC1A5Q15758 541 aa16.67■□□□□ 0.26
HOXD3-202ENST00000410016 CCDC91Q7Z6B0 441 aa16.67■□□□□ 0.26
HOXD3-202ENST00000410016 PPIL6Q8IXY8 311 aa16.67■□□□□ 0.26
HOXD3-202ENST00000410016 EXOC8Q8IYI6 725 aa16.67■□□□□ 0.26
HOXD3-202ENST00000410016 C1orf127Q8N9H9 656 aa16.67■□□□□ 0.26
HOXD3-202ENST00000410016 TTC13Q8NBP0 860 aa16.67■□□□□ 0.26
HOXD3-202ENST00000410016 SLC4A11Q8NBS3 891 aa16.67■□□□□ 0.26
HOXD3-202ENST00000410016 ZBTB10Q96DT7 871 aa16.67■□□□□ 0.26
HOXD3-202ENST00000410016 SMC6Q96SB8 1091 aa16.67■□□□□ 0.26
HOXD3-202ENST00000410016 MAK16Q9BXY0 300 aaKnown RBP16.67■□□□□ 0.26
HOXD3-202ENST00000410016 CDT1Q9H211 546 aa16.67■□□□□ 0.26
HOXD3-202ENST00000410016 FETUBQ9UGM5 382 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms