RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 GGA3Q9NZ52 723 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 ATXN2Q99700 1313 aaKnown RBP13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 LPXNO60711 386 aa13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 FAM155BO75949 473 aa13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 CYP1A1P04798 512 aaPredicted RBP13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 MKRN3Q13064 507 aaKnown RBP13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 FNBP1LQ5T0N5 605 aa13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 RHBDF2Q6PJF5 856 aa13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 APBB1IPQ7Z5R6 666 aaPredicted RBP13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 GBP7Q8N8V2 638 aaPredicted RBP13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 C12orf50Q8NA57 414 aaPredicted RBP13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 FBXL18Q96ME1 805 aa13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 PORCNQ9H237 461 aa13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 RPF1Q9H9Y2 349 aaKnown RBP13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 ARMCX1Q9P291 453 aa13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 NR2E3Q9Y5X4 410 aa13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 TMEM191CA6NGB0 347 aa13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 TBC1D12O60347 775 aa13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 MMP8P22894 467 aa13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 MSS51Q4VC12 460 aa13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 TRABD2AQ86V40 505 aa13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 CPB2Q96IY4 423 aa13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 TXLNGQ9NUQ3 528 aa13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 PSMC3IPQ9P2W1 217 aaPredicted RBP13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 KCNN4O15554 427 aa13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 MGRN1O60291 552 aa13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 ENTPD5O75356 428 aa13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 UBA1P22314 1058 aaKnown RBP13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 HMGB2P26583 209 aaKnown RBP13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 NAMPTP43490 491 aa13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 RAB6CQ53S08 254 aa13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 OTUD5Q96G74 571 aa13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 NTPCRQ9BSD7 190 aaKnown RBP13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 RAB6CQ9H0N0 254 aa13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 SEPT10Q9P0V9 454 aa13.29□□□□□ -0.28
PPP4R1-202ENST00000400555 WNK3Q9BYP7 1800 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 PDGFRAP16234 1089 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 RPL22P35268 128 aaKnown RBP13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 ELK3P41970 407 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 YARSP54577 528 aaKnown RBP13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 C1QBPQ07021 282 aaKnown RBP13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 MGAT5Q09328 741 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 MTFR1Q15390 333 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 PTPN20Q4JDL3 420 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 PLEKHA7Q6IQ23 1121 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 NLRP9Q7RTR0 991 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 ATP11CQ8NB49 1132 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 TRIM56Q9BRZ2 755 aaKnown RBP13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 ASCC2Q9H1I8 757 aaPredicted RBP13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 HOXC10Q9NYD6 342 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 ZNF214Q9UL59 606 aaPredicted RBP13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 SLC12A4Q9UP95 1085 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 USH1CQ9Y6N9 552 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 A0A0B4J269 797 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 PLA2G6O60733 806 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 ZC3H11AO75152 810 aaKnown RBP eCLIP13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 PAX7P23759 505 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 IL1R2P27930 398 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 LAMTOR4Q0VGL1 99 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 SGSM1Q2NKQ1 1148 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 FAM160B1Q5W0V3 765 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 ZNF75CPQ92670 426 aaPredicted RBP13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 SPATA33Q96N06 139 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 RAB3IPQ96QF0 476 aaPredicted RBP13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 SHCBP1LQ9BZQ2 653 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 SMYD3Q9H7B4 428 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 FBXO6Q9NRD1 293 aaPredicted RBP13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 HEY2Q9UBP5 337 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 BGNP21810 368 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 TGFB2P61812 414 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 HSDL1Q3SXM5 330 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 CCDC125Q86Z20 511 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 TTC8Q8TAM2 541 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 TMEM109Q9BVC6 243 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 SYNPO2Q9UMS6 1093 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 SUFUQ9UMX1 484 aa13.28□□□□□ -0.28
PPP4R1-202ENST00000400555 hCG_1818297A0A087WSY0 165 aa13.27□□□□□ -0.28
PPP4R1-202ENST00000400555 PRPSAP2O60256 369 aa13.27□□□□□ -0.28
PPP4R1-202ENST00000400555 PYGBP11216 843 aa13.27□□□□□ -0.28
PPP4R1-202ENST00000400555 GEMIN4P57678 1058 aaKnown RBP13.27□□□□□ -0.28
PPP4R1-202ENST00000400555 PTK7Q13308 1070 aa13.27□□□□□ -0.28
PPP4R1-202ENST00000400555 PIGHQ14442 188 aaPredicted RBP13.27□□□□□ -0.28
PPP4R1-202ENST00000400555 ALLCQ8N6M5 410 aa13.27□□□□□ -0.28
PPP4R1-202ENST00000400555 CEP41Q9BYV8 373 aa13.27□□□□□ -0.28
PPP4R1-202ENST00000400555 HMGXB4Q9UGU5 601 aa13.27□□□□□ -0.28
PPP4R1-202ENST00000400555 AFG3L2Q9Y4W6 797 aa13.27□□□□□ -0.28
PPP4R1-202ENST00000400555 ADCY3O60266 1144 aa13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 TOM1L1O75674 476 aa13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 BAG2O95816 211 aa13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 GSTA1P08263 222 aa13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 MIPP30301 263 aa13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 BNIP1Q12981 228 aa13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 KLF1Q13351 362 aaPredicted RBP13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 FBXO16Q8IX29 292 aaPredicted RBP13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 C12orf29Q8N999 325 aa13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 HIPK4Q8NE63 616 aa13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 ATXN7L3BQ96GX2 97 aa13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 TTC25Q96NG3 672 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms