RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 LRRC14Q15048 493 aa16.84■□□□□ 0.29
CNKSR1-202ENST00000374253 CDO1Q16878 200 aa16.84■□□□□ 0.29
CNKSR1-202ENST00000374253 FAM187BQ17R55 369 aa16.84■□□□□ 0.29
CNKSR1-202ENST00000374253 TFDP3Q5H9I0 405 aa16.84■□□□□ 0.29
CNKSR1-202ENST00000374253 PPP1R2P3Q6NXS1 205 aa16.84■□□□□ 0.29
CNKSR1-202ENST00000374253 CCDC89Q8N998 374 aa16.84■□□□□ 0.29
CNKSR1-202ENST00000374253 OSMRQ99650 979 aa16.84■□□□□ 0.29
CNKSR1-202ENST00000374253 EIF2AQ9BY44 585 aaKnown RBP16.84■□□□□ 0.29
CNKSR1-202ENST00000374253 SCN1AP35498 2009 aa16.83■□□□□ 0.29
CNKSR1-202ENST00000374253 SIGLEC16A6NMB1 481 aa16.83■□□□□ 0.28
CNKSR1-202ENST00000374253 SGK1O00141 431 aa16.83■□□□□ 0.28
CNKSR1-202ENST00000374253 BANF1O75531 89 aa16.83■□□□□ 0.28
CNKSR1-202ENST00000374253 TTC4O95801 387 aa16.83■□□□□ 0.28
CNKSR1-202ENST00000374253 LIG3P49916 1009 aa16.83■□□□□ 0.28
CNKSR1-202ENST00000374253 SLC25A11Q02978 314 aaKnown RBP16.83■□□□□ 0.28
CNKSR1-202ENST00000374253 ACVR2BQ13705 512 aa16.83■□□□□ 0.28
CNKSR1-202ENST00000374253 FASTKD3Q14CZ7 662 aaKnown RBP16.83■□□□□ 0.28
CNKSR1-202ENST00000374253 FAM102AQ5T9C2 384 aaPredicted RBP16.83■□□□□ 0.28
CNKSR1-202ENST00000374253 TRMT10CQ7L0Y3 403 aaKnown RBP16.83■□□□□ 0.28
CNKSR1-202ENST00000374253 ZMAT2Q96NC0 199 aaKnown RBP16.83■□□□□ 0.28
CNKSR1-202ENST00000374253 ADAM33Q9BZ11 813 aa16.83■□□□□ 0.28
CNKSR1-202ENST00000374253 HOMER3Q9NSC5 361 aa16.83■□□□□ 0.28
CNKSR1-202ENST00000374253 FAM49BQ9NUQ9 324 aa16.83■□□□□ 0.28
CNKSR1-202ENST00000374253 STRIP2Q9ULQ0 834 aa16.83■□□□□ 0.28
CNKSR1-202ENST00000374253 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.83■□□□□ 0.28
CNKSR1-202ENST00000374253 GTF2A2P52657 109 aa16.83■□□□□ 0.28
CNKSR1-202ENST00000374253 CORO7P57737 925 aa16.83■□□□□ 0.28
CNKSR1-202ENST00000374253 SYDE1Q6ZW31 735 aaPredicted RBP16.83■□□□□ 0.28
CNKSR1-202ENST00000374253 C18orf25Q96B23 403 aaPredicted RBP16.83■□□□□ 0.28
CNKSR1-202ENST00000374253 MRRFQ96E11 262 aaKnown RBP16.83■□□□□ 0.28
CNKSR1-202ENST00000374253 TINF2Q9BSI4 451 aa16.83■□□□□ 0.28
CNKSR1-202ENST00000374253 CPA4Q9UI42 421 aa16.83■□□□□ 0.28
CNKSR1-202ENST00000374253 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.83■□□□□ 0.28
CNKSR1-202ENST00000374253 CITO14578 2027 aa16.82■□□□□ 0.28
CNKSR1-202ENST00000374253 A0A1B0GUA9 196 aa16.82■□□□□ 0.28
CNKSR1-202ENST00000374253 CST8O60676 142 aa16.82■□□□□ 0.28
CNKSR1-202ENST00000374253 GPD2P43304 727 aa16.82■□□□□ 0.28
CNKSR1-202ENST00000374253 GDF10P55107 478 aa16.82■□□□□ 0.28
CNKSR1-202ENST00000374253 GAD2Q05329 585 aa16.82■□□□□ 0.28
CNKSR1-202ENST00000374253 IFT88Q13099 833 aa16.82■□□□□ 0.28
CNKSR1-202ENST00000374253 C15orf59Q2T9L4 293 aaPredicted RBP16.82■□□□□ 0.28
CNKSR1-202ENST00000374253 EXOC3L1Q86VI1 746 aa16.82■□□□□ 0.28
CNKSR1-202ENST00000374253 CYP4X1Q8N118 509 aa16.82■□□□□ 0.28
CNKSR1-202ENST00000374253 XPO6Q96QU8 1125 aaKnown RBP16.82■□□□□ 0.28
CNKSR1-202ENST00000374253 RBM15Q96T37 977 aaKnown RBP eCLIP16.82■□□□□ 0.28
CNKSR1-202ENST00000374253 PRMT1Q99873 361 aaKnown RBP16.82■□□□□ 0.28
CNKSR1-202ENST00000374253 ADPGKQ9BRR6 497 aa16.82■□□□□ 0.28
CNKSR1-202ENST00000374253 LHX5Q9H2C1 402 aa16.82■□□□□ 0.28
CNKSR1-202ENST00000374253 ASB7Q9H672 318 aa16.82■□□□□ 0.28
CNKSR1-202ENST00000374253 TUBGCP4Q9UGJ1 667 aa16.82■□□□□ 0.28
CNKSR1-202ENST00000374253 SNX9Q9Y5X1 595 aa16.82■□□□□ 0.28
CNKSR1-202ENST00000374253 C3orf70A6NLC5 250 aaPredicted RBP16.81■□□□□ 0.28
CNKSR1-202ENST00000374253 PAEPP09466 180 aa16.81■□□□□ 0.28
CNKSR1-202ENST00000374253 AKAP5P24588 427 aa16.81■□□□□ 0.28
CNKSR1-202ENST00000374253 MMP13P45452 471 aa16.81■□□□□ 0.28
CNKSR1-202ENST00000374253 OTUD4Q01804 1114 aaKnown RBP16.81■□□□□ 0.28
CNKSR1-202ENST00000374253 DUSP28Q4G0W2 176 aa16.81■□□□□ 0.28
CNKSR1-202ENST00000374253 SYCP2LQ5T4T6 812 aa16.81■□□□□ 0.28
CNKSR1-202ENST00000374253 ACTL9Q8TC94 416 aa16.81■□□□□ 0.28
CNKSR1-202ENST00000374253 MRPL45Q9BRJ2 306 aaKnown RBP16.81■□□□□ 0.28
CNKSR1-202ENST00000374253 CALN1Q9BXU9 219 aa16.81■□□□□ 0.28
CNKSR1-202ENST00000374253 SAYSD1Q9NPB0 183 aa16.81■□□□□ 0.28
CNKSR1-202ENST00000374253 TSPAN16Q9UKR8 245 aa16.81■□□□□ 0.28
CNKSR1-202ENST00000374253 RBM47A0AV96 593 aaKnown RBP16.81■□□□□ 0.28
CNKSR1-202ENST00000374253 E5RJQ4 531 aa16.81■□□□□ 0.28
CNKSR1-202ENST00000374253 AGTP01019 485 aa16.81■□□□□ 0.28
CNKSR1-202ENST00000374253 MIPP30301 263 aa16.81■□□□□ 0.28
CNKSR1-202ENST00000374253 MMRN1Q13201 1228 aa16.81■□□□□ 0.28
CNKSR1-202ENST00000374253 RNF187Q5TA31 235 aaPredicted RBP16.81■□□□□ 0.28
CNKSR1-202ENST00000374253 OR6B2Q6IFH4 312 aa16.81■□□□□ 0.28
CNKSR1-202ENST00000374253 TRNP1Q6NT89 227 aa16.81■□□□□ 0.28
CNKSR1-202ENST00000374253 CATSPER4Q7RTX7 472 aa16.81■□□□□ 0.28
CNKSR1-202ENST00000374253 ACOT1Q86TX2 421 aa16.81■□□□□ 0.28
CNKSR1-202ENST00000374253 ALLCQ8N6M5 410 aa16.81■□□□□ 0.28
CNKSR1-202ENST00000374253 KLK14Q9P0G3 267 aa16.81■□□□□ 0.28
CNKSR1-202ENST00000374253 DDX20Q9UHI6 824 aaKnown RBP16.81■□□□□ 0.28
CNKSR1-202ENST00000374253 IQCA1LA6NCM1 817 aa16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 STRNO43815 780 aa16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 PIAS1O75925 651 aa16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 PECAM1P16284 738 aaPredicted RBP16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 HOXA11P31270 313 aaPredicted RBP16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 ZNF200P98182 395 aaPredicted RBP16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 TAP1Q03518 808 aa16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 GRB14Q14449 540 aa16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 HIC1Q14526 733 aa16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 DGKDQ16760 1214 aa16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 LRRC38Q5VT99 294 aa16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 HIBCHQ6NVY1 386 aaPredicted RBP16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 ARHGEF2Q92974 986 aaKnown RBP16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 VCPP55072 806 aaKnown RBP16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 RBP5P82980 135 aa16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 ATP11AP98196 1134 aa16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 POU5F1BQ06416 359 aa16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 OASLQ15646 514 aaKnown RBP16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 ERMARDQ5T6L9 678 aa16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 CPLX4Q7Z7G2 160 aa16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 TAX1BP1Q86VP1 789 aa16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 SESTD1Q86VW0 696 aa16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 IFNLR1Q8IU57 520 aaPredicted RBP16.8■□□□□ 0.28
CNKSR1-202ENST00000374253 NIPA2Q8N8Q9 360 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms