RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 DCUN1D1Q96GG9 259 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 CSRNP1Q96S65 589 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 NUP85Q9BW27 656 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 CCDC106Q9BWC9 280 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 TAGLN3Q9UI15 199 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 SYNPO2Q9UMS6 1093 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 NHSQ6T4R5 1651 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 FAM47E-STBD1D6RA91 191 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 RAG1P15918 1043 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 TKTP29401 623 aaKnown RBP10□□□□□ -0.81
SF3A3-201ENST00000373019 ADCY8P40145 1251 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 SLC5A3P53794 718 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 MESDQ14696 234 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 CCDC142Q17RM4 750 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 EDRF1Q3B7T1 1238 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 TMEM119Q4V9L6 283 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 SGO2Q562F6 1265 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 SLC35C1Q96A29 364 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 ERLEC1Q96DZ1 483 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 CNBD2Q96M20 576 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 NDEL1Q9GZM8 345 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 NRDE2Q9H7Z3 1164 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 SSU72Q9NP77 194 aaKnown RBP10□□□□□ -0.81
SF3A3-201ENST00000373019 TMOD2Q9NZR1 351 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 THEGQ9P2T0 379 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 RBMX2Q9Y388 322 aaKnown RBP10□□□□□ -0.81
SF3A3-201ENST00000373019 BTAF1O14981 1849 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 SNAP23O00161 211 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 AKAP3O75969 853 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 SRGAP2CP0DJJ0 459 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 SRGAP2BP0DMP2 458 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 ZNF12P17014 697 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 CASP5P51878 434 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 CTBSQ01459 385 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 CACNB1Q02641 598 aaPredicted RBP10□□□□□ -0.81
SF3A3-201ENST00000373019 TCEAL1Q15170 157 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 GRAMD1BQ3KR37 738 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 ITPRIPL1Q6GPH6 555 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 IFNLR1Q8IU57 520 aaPredicted RBP10□□□□□ -0.81
SF3A3-201ENST00000373019 SREK1Q8WXA9 508 aaKnown RBP10□□□□□ -0.81
SF3A3-201ENST00000373019 PSPC1Q8WXF1 523 aaKnown RBP10□□□□□ -0.81
SF3A3-201ENST00000373019 HSPH1Q92598 858 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 MRRFQ96E11 262 aaKnown RBP10□□□□□ -0.81
SF3A3-201ENST00000373019 BTBD6Q96KE9 485 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 ZMAT2Q96NC0 199 aaKnown RBP10□□□□□ -0.81
SF3A3-201ENST00000373019 KLC2Q9H0B6 622 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 WNT8AQ9H1J5 351 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 GREM2Q9H772 168 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 MEI4A8MW99 385 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 TMX2-CTNND1H3BSU7 103 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 EDIL3O43854 480 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 CCNT2O60583 730 aaKnown RBP9.99□□□□□ -0.81
SF3A3-201ENST00000373019 ATF2P15336 505 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 GNA11P29992 359 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 PPARGP37231 505 aaPredicted RBP9.99□□□□□ -0.81
SF3A3-201ENST00000373019 IGBP1P78318 339 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 SLC25A3Q00325 362 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 DCAF17Q5H9S7 520 aaPredicted RBP9.99□□□□□ -0.81
SF3A3-201ENST00000373019 FAM47AQ5JRC9 791 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 RALGPS1Q5JS13 557 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 PGM2L1Q6PCE3 622 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 MZB1Q8WU39 189 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 SLC4A9Q96Q91 983 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 ISCA1Q9BUE6 129 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 BARHL2Q9NY43 387 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 POLIQ9UNA4 740 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 DTNAQ9Y4J8 743 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 AP4B1Q9Y6B7 739 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 LAMB2P55268 1798 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 RSPH10B2B2RC85 870 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 SPECC1L-ADORA2AF8WAN1 911 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 INHBBP09529 407 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 RSPH10BP0C881 870 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 XRCC5P13010 732 aaKnown RBP9.99□□□□□ -0.81
SF3A3-201ENST00000373019 PLS3P13797 630 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 FGFR2P21802 821 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 CDH3P22223 829 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 ALDH1A3P47895 512 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 ALDH3B2P48448 385 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 DRAP1Q14919 205 aaPredicted RBP9.99□□□□□ -0.81
SF3A3-201ENST00000373019 ARL13BQ3SXY8 428 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 HP1BP3Q5SSJ5 553 aaPredicted RBP9.99□□□□□ -0.81
SF3A3-201ENST00000373019 NIPAL1Q6NVV3 410 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 AMIGO3Q86WK7 504 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 CHPT1Q8WUD6 406 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 PTCD2Q8WV60 388 aaKnown RBP9.99□□□□□ -0.81
SF3A3-201ENST00000373019 PLEKHA8Q96JA3 519 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.99□□□□□ -0.81
SF3A3-201ENST00000373019 NCKIPSDQ9NZQ3 722 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 RAB26Q9ULW5 256 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 TTLL3Q9Y4R7 772 aa9.99□□□□□ -0.81
SF3A3-201ENST00000373019 PRR5-ARHGAP8B1AHC4 643 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 TBC1D12O60347 775 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 MMP10P09238 476 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 POLR2MP0CAP2 368 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 DHRS4L1P0CG22 281 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 ADSSP30520 456 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 FXR2P51116 673 aaKnown RBP eCLIP9.98□□□□□ -0.817e-9■■□□□ 12.4
SF3A3-201ENST00000373019 ARHGAP8P85298 464 aa9.98□□□□□ -0.81
SF3A3-201ENST00000373019 HIC1Q14526 733 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms