RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 PPP1R37O75864 691 aa11.09□□□□□ -0.63
COL5A1-202ENST00000371820 LDHAP00338 332 aaKnown RBP11.09□□□□□ -0.63
COL5A1-202ENST00000371820 C8AP07357 584 aa11.09□□□□□ -0.63
COL5A1-202ENST00000371820 POU2F2P09086 479 aa11.09□□□□□ -0.63
COL5A1-202ENST00000371820 ELF1P32519 619 aa11.09□□□□□ -0.63
COL5A1-202ENST00000371820 OR1D2P34982 312 aa11.09□□□□□ -0.63
COL5A1-202ENST00000371820 ACTN2P35609 894 aa11.09□□□□□ -0.63
COL5A1-202ENST00000371820 AARSP49588 968 aaKnown RBP eCLIP11.09□□□□□ -0.63
COL5A1-202ENST00000371820 APBA1Q02410 837 aa11.09□□□□□ -0.63
COL5A1-202ENST00000371820 MAPK8IP2Q13387 824 aaPredicted RBP11.09□□□□□ -0.63
COL5A1-202ENST00000371820 CASP8Q14790 479 aa11.09□□□□□ -0.63
COL5A1-202ENST00000371820 VARS2Q5ST30 1063 aaKnown RBP11.09□□□□□ -0.63
COL5A1-202ENST00000371820 NT5DC4Q86YG4 428 aa11.09□□□□□ -0.63
COL5A1-202ENST00000371820 SYCP3Q8IZU3 236 aa11.09□□□□□ -0.63
COL5A1-202ENST00000371820 LRRN4CLQ8ND94 238 aa11.09□□□□□ -0.63
COL5A1-202ENST00000371820 C3orf58Q8NDZ4 430 aa11.09□□□□□ -0.63
COL5A1-202ENST00000371820 POMGNT1Q8WZA1 660 aa11.09□□□□□ -0.63
COL5A1-202ENST00000371820 NXPE3Q969Y0 559 aa11.09□□□□□ -0.63
COL5A1-202ENST00000371820 C18orf25Q96B23 403 aaPredicted RBP11.09□□□□□ -0.63
COL5A1-202ENST00000371820 DNAJC19Q96DA6 116 aa11.09□□□□□ -0.63
COL5A1-202ENST00000371820 CHP1Q99653 195 aa11.09□□□□□ -0.63
COL5A1-202ENST00000371820 HAPLN2Q9GZV7 340 aa11.09□□□□□ -0.63
COL5A1-202ENST00000371820 ASB7Q9H672 318 aa11.09□□□□□ -0.63
COL5A1-202ENST00000371820 TMEM206Q9H813 350 aa11.09□□□□□ -0.63
COL5A1-202ENST00000371820 KCNK12Q9HB15 430 aa11.09□□□□□ -0.63
COL5A1-202ENST00000371820 ABCB6Q9NP58 842 aa11.09□□□□□ -0.63
COL5A1-202ENST00000371820 PANK4Q9NVE7 773 aa11.09□□□□□ -0.63
COL5A1-202ENST00000371820 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.09□□□□□ -0.63
COL5A1-202ENST00000371820 CPSF3Q9UKF6 684 aaKnown RBP11.09□□□□□ -0.63
COL5A1-202ENST00000371820 AGO2Q9UKV8 859 aaKnown RBP11.09□□□□□ -0.63
COL5A1-202ENST00000371820 CDY1Q9Y6F8 540 aa11.09□□□□□ -0.63
COL5A1-202ENST00000371820 STYXL1Q9Y6J8 313 aa11.09□□□□□ -0.63
COL5A1-202ENST00000371820 ZFP37Q9Y6Q3 630 aaPredicted RBP11.09□□□□□ -0.63
COL5A1-202ENST00000371820 TRIP11Q15643 1979 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 FRMD3A2A2Y4 597 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 LACTBL1A8MY62 500 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 I3L4J1 428 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 KIAA0391O15091 583 aaKnown RBP11.08□□□□□ -0.64
COL5A1-202ENST00000371820 FANCGO15287 622 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 AKR1B10O60218 316 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 SEC31AO94979 1220 aaKnown RBP11.08□□□□□ -0.64
COL5A1-202ENST00000371820 IL18RAPO95256 599 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 ADRB2P07550 413 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 SPATA31D3P0C874 917 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 NPR3P17342 541 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 AOC1P19801 751 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 GBP2P32456 591 aaPredicted RBP11.08□□□□□ -0.64
COL5A1-202ENST00000371820 NBL1P41271 181 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 TNFSF9P41273 254 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 MAGEA1P43355 309 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 TMEM132DQ14C87 1099 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 ZBTB6Q15916 424 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 ENOX2Q16206 610 aaKnown RBP11.08□□□□□ -0.64
COL5A1-202ENST00000371820 ZC2HC1CQ53FD0 456 aaPredicted RBP11.08□□□□□ -0.64
COL5A1-202ENST00000371820 ALS2CLQ60I27 953 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 TPGS2Q68CL5 300 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 SLC8B1Q6J4K2 584 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 SLC39A4Q6P5W5 647 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 WDR59Q6PJI9 974 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 GBP6Q6ZN66 633 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 SPATA31D4Q6ZUB0 917 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 CACNA2D4Q7Z3S7 1137 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 USP37Q86T82 979 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 EIF1ADQ8N9N8 165 aaKnown RBP11.08□□□□□ -0.64
COL5A1-202ENST00000371820 ZNF707Q96C28 371 aaPredicted RBP11.08□□□□□ -0.64
COL5A1-202ENST00000371820 FAM212AQ96EL1 285 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 CALR3Q96L12 384 aaKnown RBP11.08□□□□□ -0.64
COL5A1-202ENST00000371820 CRACR2AQ9BSW2 395 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 IRX2Q9BZI1 471 aaPredicted RBP11.08□□□□□ -0.64
COL5A1-202ENST00000371820 IGSF9Q9P2J2 1179 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 TUBGCP4Q9UGJ1 667 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 MAFFQ9ULX9 164 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 PCDHB8Q9UN66 801 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 C2CD2Q9Y426 696 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 HYOU1Q9Y4L1 999 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 PCDHA13Q9Y5I0 950 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 MYO15AQ9UKN7 3530 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 ATP8B3O60423 1300 aa11.08□□□□□ -0.64
COL5A1-202ENST00000371820 VWA8A3KMH1 1905 aa11.07□□□□□ -0.64
COL5A1-202ENST00000371820 DOCK8Q8NF50 2099 aa11.07□□□□□ -0.64
COL5A1-202ENST00000371820 CFAP54Q96N23 3096 aa11.07□□□□□ -0.64
COL5A1-202ENST00000371820 CES2O00748 559 aa11.07□□□□□ -0.64
COL5A1-202ENST00000371820 PRRG1O14668 218 aa11.07□□□□□ -0.64
COL5A1-202ENST00000371820 FAM189A1O60320 539 aa11.07□□□□□ -0.64
COL5A1-202ENST00000371820 SASH3O75995 380 aa11.07□□□□□ -0.64
COL5A1-202ENST00000371820 LRG1P02750 347 aa11.07□□□□□ -0.64
COL5A1-202ENST00000371820 MYBP10242 640 aa11.07□□□□□ -0.64
COL5A1-202ENST00000371820 GARTP22102 1010 aa11.07□□□□□ -0.64
COL5A1-202ENST00000371820 MARSP56192 900 aaKnown RBP11.07□□□□□ -0.64
COL5A1-202ENST00000371820 YWHAHQ04917 246 aaPredicted RBP11.07□□□□□ -0.64
COL5A1-202ENST00000371820 STK4Q13043 487 aa11.07□□□□□ -0.64
COL5A1-202ENST00000371820 NNTQ13423 1086 aa11.07□□□□□ -0.64
COL5A1-202ENST00000371820 CTXN3Q4LDR2 81 aa11.07□□□□□ -0.64
COL5A1-202ENST00000371820 CCDC181Q5TID7 509 aa11.07□□□□□ -0.64
COL5A1-202ENST00000371820 JADE1Q6IE81 842 aa11.07□□□□□ -0.64
COL5A1-202ENST00000371820 CD300LGQ6UXG3 332 aa11.07□□□□□ -0.64
COL5A1-202ENST00000371820 DSTYKQ6XUX3 929 aa11.07□□□□□ -0.64
COL5A1-202ENST00000371820 CCNI2Q6ZMN8 369 aaPredicted RBP11.07□□□□□ -0.64
COL5A1-202ENST00000371820 GET4Q7L5D6 327 aaPredicted RBP11.07□□□□□ -0.64
COL5A1-202ENST00000371820 FLCNQ8NFG4 579 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms