RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 DDX18Q9NVP1 670 aaKnown RBP12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 NDE1Q9NXR1 346 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 PTTG2Q9NZH5 202 aa12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 SAE1Q9UBE0 346 aaPredicted RBP12.25□□□□□ -0.45
SMARCA1-201ENST00000371121 BTBD19C9JJ37 291 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 TMEM63AO94886 807 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 MAN1A1P33908 653 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 CREB5Q02930 508 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 SLC18A2Q05940 514 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 GPS1Q13098 491 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 TRMT5Q32P41 509 aaKnown RBP12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 PGM2L1Q6PCE3 622 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 TMEM121Q9BTD3 319 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 ANGPTL2Q9UKU9 493 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 UBE4BO95155 1302 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 CYB561D2O14569 222 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 RAD21O60216 631 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 TROVE2P10155 538 aaKnown RBP eCLIP12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 SSTR3P32745 418 aaPredicted RBP12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 EVA1CP58658 441 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 MYBPC1Q00872 1141 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 R3HDM1Q15032 1099 aaKnown RBP12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 PDK3Q15120 406 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 ODR4Q5SWX8 454 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 TPH2Q8IWU9 490 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 FAM178BQ8IXR5 827 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 NAT8LQ8N9F0 302 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 LINC00116Q8NCU8 138 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 WDR66Q8TBY9 1149 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 CNKSR2Q8WXI2 1034 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 CPT1BQ92523 772 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 ACSS3Q9H6R3 686 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 BTG4Q9NY30 223 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 SRP68Q9UHB9 627 aaKnown RBP12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 GSTTP1A0A1W2PQM5 241 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 PROSCO94903 275 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 FAM13AO94988 1023 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 TOP3BO95985 862 aaKnown RBP12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 SLC25A3Q00325 362 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 ZNF365Q70YC5 407 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 MAVSQ7Z434 540 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 ACSF2Q96CM8 615 aaPredicted RBP12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 ANKRD2Q9GZV1 360 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 FETUBQ9UGM5 382 aa12.24□□□□□ -0.45
SMARCA1-201ENST00000371121 SLX4Q8IY92 1834 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 C3orf70A6NLC5 250 aaPredicted RBP12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 E7ESA3 106 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 PMM2O15305 246 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 BAG2O95816 211 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 GALK1P51570 392 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 MTA1Q13330 715 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 CLEC4GQ6UXB4 293 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 CBWD2Q8IUF1 395 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 TAS1R2Q8TE23 839 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 DGCR14Q96DF8 476 aaKnown RBP12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 FAM20AQ96MK3 541 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 SLITRK1Q96PX8 696 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 C15orf38-AP3S2A0A0A6YYH1 394 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 SPDYE2BA6NHP3 402 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 CASQ2O14958 399 aaPredicted RBP12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 TMCC1O94876 653 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 SPDYE6P0CI01 402 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 WNT7BP56706 349 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 BTG3Q14201 252 aaPredicted RBP12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 MORF4L2Q15014 288 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 SPDYE2Q495Y8 402 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 RABGAP1LQ5R372 815 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 DRICH1Q6PGQ1 229 aaPredicted RBP12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 MFSD7Q6UXD7 560 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 ARPINQ7Z6K5 226 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 ANKRD23Q86SG2 305 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 PRPF39Q86UA1 669 aaKnown RBP12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 EFCAB3Q8N7B9 438 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 IRGQQ8WZA9 623 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 PI4K2AQ9BTU6 479 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 C1orf21Q9H246 121 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 CIDEBQ9UHD4 219 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 COQ4Q9Y3A0 265 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 HMX2A2RU54 273 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 KLF11O14901 512 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 ARRB2P32121 409 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 RPL7AP62424 266 aaKnown RBP12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 MAMLD1Q13495 774 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 PEX6Q13608 980 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 TBC1D10BQ4KMP7 808 aaPredicted RBP12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 CCDC110Q8TBZ0 833 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 HSPBAP1Q96EW2 488 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 HSPBP1Q9NZL4 362 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 SNCAIPQ9Y6H5 919 aa12.23□□□□□ -0.45
SMARCA1-201ENST00000371121 SMIM31A0A1B0GVY4 71 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 GOLGA8IPA6NC78 632 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 GOLGA8JA6NMD2 632 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 TULP1O00294 542 aaPredicted RBP12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 CHMP2AO43633 222 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 DNAJA2O60884 412 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 C6orf222P0C671 652 aaPredicted RBP12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 AP2B1P63010 937 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 OGDHQ02218 1023 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 APOFQ13790 326 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 ELMSAN1Q6PJG2 1045 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms