RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 SLC8A3P57103 927 aa18.34■□□□□ 0.53
CLDN4-201ENST00000340958 HABP4Q5JVS0 413 aaKnown RBP18.34■□□□□ 0.53
CLDN4-201ENST00000340958 C9orf50Q5SZB4 431 aa18.34■□□□□ 0.53
CLDN4-201ENST00000340958 CYP4A22Q5TCH4 519 aa18.34■□□□□ 0.53
CLDN4-201ENST00000340958 DCUN1D2Q6PH85 259 aa18.34■□□□□ 0.53
CLDN4-201ENST00000340958 COLGALT2Q8IYK4 626 aa18.34■□□□□ 0.53
CLDN4-201ENST00000340958 TDHQ8IZJ6 230 aa18.34■□□□□ 0.53
CLDN4-201ENST00000340958 BTBD6Q96KE9 485 aa18.34■□□□□ 0.53
CLDN4-201ENST00000340958 CARD6Q9BX69 1037 aa18.34■□□□□ 0.53
CLDN4-201ENST00000340958 MIS12Q9H081 205 aa18.34■□□□□ 0.53
CLDN4-201ENST00000340958 TRAPPC3O43617 180 aa18.33■□□□□ 0.53
CLDN4-201ENST00000340958 MTA2O94776 668 aa18.33■□□□□ 0.53
CLDN4-201ENST00000340958 PTPN1P18031 435 aaKnown RBP18.33■□□□□ 0.53
CLDN4-201ENST00000340958 PCSK1P29120 753 aa18.33■□□□□ 0.53
CLDN4-201ENST00000340958 CXCR5P32302 372 aa18.33■□□□□ 0.53
CLDN4-201ENST00000340958 GPD2P43304 727 aa18.33■□□□□ 0.53
CLDN4-201ENST00000340958 AARSP49588 968 aaKnown RBP eCLIP18.33■□□□□ 0.53
CLDN4-201ENST00000340958 SNX16P57768 344 aa18.33■□□□□ 0.53
CLDN4-201ENST00000340958 AMPD2Q01433 879 aa18.33■□□□□ 0.53
CLDN4-201ENST00000340958 DSC1Q08554 894 aa18.33■□□□□ 0.53
CLDN4-201ENST00000340958 PDCLQ13371 301 aa18.33■□□□□ 0.53
CLDN4-201ENST00000340958 PPIGQ13427 754 aaKnown RBP eCLIP18.33■□□□□ 0.53
CLDN4-201ENST00000340958 MAMLD1Q13495 774 aa18.33■□□□□ 0.53
CLDN4-201ENST00000340958 WHAMMP3Q1A5X7 153 aa18.33■□□□□ 0.53
CLDN4-201ENST00000340958 CCDC181Q5TID7 509 aa18.33■□□□□ 0.53
CLDN4-201ENST00000340958 ARHGAP17Q68EM7 881 aa18.33■□□□□ 0.53
CLDN4-201ENST00000340958 C11orf63Q6NUN7 778 aa18.33■□□□□ 0.53
CLDN4-201ENST00000340958 LLGL2Q6P1M3 1020 aa18.33■□□□□ 0.53
CLDN4-201ENST00000340958 C16orf59Q7L2K0 433 aa18.33■□□□□ 0.53
CLDN4-201ENST00000340958 THEM5Q8N1Q8 247 aa18.33■□□□□ 0.53
CLDN4-201ENST00000340958 MYRIPQ8NFW9 859 aa18.33■□□□□ 0.53
CLDN4-201ENST00000340958 SLC2A14Q8TDB8 520 aa18.33■□□□□ 0.53
CLDN4-201ENST00000340958 RSPH1Q8WYR4 309 aa18.33■□□□□ 0.53
CLDN4-201ENST00000340958 CASD1Q96PB1 797 aa18.33■□□□□ 0.53
CLDN4-201ENST00000340958 OSBPL9Q96SU4 736 aa18.33■□□□□ 0.53
CLDN4-201ENST00000340958 SELENOOQ9BVL4 669 aa18.33■□□□□ 0.53
CLDN4-201ENST00000340958 TLR10Q9BXR5 811 aa18.33■□□□□ 0.53
CLDN4-201ENST00000340958 ALG6Q9Y672 507 aa18.33■□□□□ 0.53
CLDN4-201ENST00000340958 A0A1W2PPC1 479 aa18.33■□□□□ 0.52
CLDN4-201ENST00000340958 GOLGA8SH3BPF8 625 aa18.33■□□□□ 0.52
CLDN4-201ENST00000340958 GABRDO14764 452 aa18.33■□□□□ 0.52
CLDN4-201ENST00000340958 SPOPO43791 374 aa18.33■□□□□ 0.52
CLDN4-201ENST00000340958 ACRP10323 421 aa18.33■□□□□ 0.52
CLDN4-201ENST00000340958 PTP4A2Q12974 167 aa18.33■□□□□ 0.52
CLDN4-201ENST00000340958 SHHQ15465 462 aa18.33■□□□□ 0.52
CLDN4-201ENST00000340958 PTPN20Q4JDL3 420 aa18.33■□□□□ 0.52
CLDN4-201ENST00000340958 MDH1BQ5I0G3 518 aa18.33■□□□□ 0.52
CLDN4-201ENST00000340958 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.33■□□□□ 0.52
CLDN4-201ENST00000340958 SLFN11Q7Z7L1 901 aa18.33■□□□□ 0.52
CLDN4-201ENST00000340958 CEP112Q8N8E3 955 aa18.33■□□□□ 0.52
CLDN4-201ENST00000340958 VWCEQ96DN2 955 aa18.33■□□□□ 0.52
CLDN4-201ENST00000340958 SYT15Q9BQS2 421 aa18.33■□□□□ 0.52
CLDN4-201ENST00000340958 DNAJB4Q9UDY4 337 aa18.33■□□□□ 0.52
CLDN4-201ENST00000340958 CYTH4Q9UIA0 394 aa18.33■□□□□ 0.52
CLDN4-201ENST00000340958 KCNK3O14649 394 aa18.32■□□□□ 0.52
CLDN4-201ENST00000340958 ATP2C2O75185 946 aa18.32■□□□□ 0.52
CLDN4-201ENST00000340958 ALDH2P05091 517 aa18.32■□□□□ 0.52
CLDN4-201ENST00000340958 ITGB1P05556 798 aa18.32■□□□□ 0.52
CLDN4-201ENST00000340958 PRLRP16471 622 aa18.32■□□□□ 0.52
CLDN4-201ENST00000340958 BCAT1P54687 386 aa18.32■□□□□ 0.52
CLDN4-201ENST00000340958 OVOS1Q6IE37 1185 aa18.32■□□□□ 0.52
CLDN4-201ENST00000340958 NT5DC3Q86UY8 548 aa18.32■□□□□ 0.52
CLDN4-201ENST00000340958 ANKRD52Q8NB46 1076 aa18.32■□□□□ 0.52
CLDN4-201ENST00000340958 FEZF2Q8TBJ5 459 aa18.32■□□□□ 0.52
CLDN4-201ENST00000340958 SUSD3Q96L08 255 aa18.32■□□□□ 0.52
CLDN4-201ENST00000340958 CPXM1Q96SM3 734 aa18.32■□□□□ 0.52
CLDN4-201ENST00000340958 COLEC11Q9BWP8 271 aa18.32■□□□□ 0.52
CLDN4-201ENST00000340958 IL23AQ9NPF7 189 aa18.32■□□□□ 0.52
CLDN4-201ENST00000340958 WDR35Q9P2L0 1181 aa18.32■□□□□ 0.52
CLDN4-201ENST00000340958 CDH9Q9ULB4 789 aa18.32■□□□□ 0.52
CLDN4-201ENST00000340958 MYH10P35580 1976 aa18.32■□□□□ 0.52
CLDN4-201ENST00000340958 UQCRHLA0A096LP55 91 aa18.31■□□□□ 0.52
CLDN4-201ENST00000340958 F8W810 466 aa18.31■□□□□ 0.52
CLDN4-201ENST00000340958 M0QZQ0 153 aa18.31■□□□□ 0.52
CLDN4-201ENST00000340958 AMHP03971 560 aa18.31■□□□□ 0.52
CLDN4-201ENST00000340958 UQCRHP07919 91 aa18.31■□□□□ 0.52
CLDN4-201ENST00000340958 COMTP21964 271 aa18.31■□□□□ 0.52
CLDN4-201ENST00000340958 RGS7P49802 495 aa18.31■□□□□ 0.52
CLDN4-201ENST00000340958 TAP1Q03518 808 aa18.31■□□□□ 0.52
CLDN4-201ENST00000340958 CKAP4Q07065 602 aaKnown RBP18.31■□□□□ 0.52
CLDN4-201ENST00000340958 BST2Q10589 180 aaKnown RBP18.31■□□□□ 0.52
CLDN4-201ENST00000340958 PLEKHA7Q6IQ23 1121 aa18.31■□□□□ 0.52
CLDN4-201ENST00000340958 UBL4BQ8N7F7 174 aa18.31■□□□□ 0.52
CLDN4-201ENST00000340958 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.31■□□□□ 0.52
CLDN4-201ENST00000340958 NRDE2Q9H7Z3 1164 aa18.31■□□□□ 0.52
CLDN4-201ENST00000340958 FAN1Q9Y2M0 1017 aa18.31■□□□□ 0.52
CLDN4-201ENST00000340958 ABHD14A-ACY1A0A1B0GW23 586 aa18.3■□□□□ 0.52
CLDN4-201ENST00000340958 PIK3R2O00459 728 aa18.3■□□□□ 0.52
CLDN4-201ENST00000340958 ZNF185O15231 689 aa18.3■□□□□ 0.52
CLDN4-201ENST00000340958 B4GALT3O60512 393 aa18.3■□□□□ 0.52
CLDN4-201ENST00000340958 ERBB2P04626 1255 aa18.3■□□□□ 0.52
CLDN4-201ENST00000340958 SETSIPP0DME0 302 aa18.3■□□□□ 0.52
CLDN4-201ENST00000340958 PAFAH1B1P43034 410 aa18.3■□□□□ 0.52
CLDN4-201ENST00000340958 SSR1P43307 286 aaKnown RBP18.3■□□□□ 0.52
CLDN4-201ENST00000340958 CDR1P51861 262 aa18.3■□□□□ 0.52
CLDN4-201ENST00000340958 TTC30AQ86WT1 665 aa18.3■□□□□ 0.52
CLDN4-201ENST00000340958 LRRC43Q8N309 656 aa18.3■□□□□ 0.52
CLDN4-201ENST00000340958 C3orf20Q8ND61 904 aa18.3■□□□□ 0.52
CLDN4-201ENST00000340958 SPATA18Q8TC71 538 aa18.3■□□□□ 0.52
CLDN4-201ENST00000340958 MCEEQ96PE7 176 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms