RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 GRK3P35626 688 aa17.02■□□□□ 0.31
PTCH1-201ENST00000331920 PTPN12Q05209 780 aaKnown RBP17.02■□□□□ 0.31
PTCH1-201ENST00000331920 PKN2Q16513 984 aaKnown RBP17.02■□□□□ 0.31
PTCH1-201ENST00000331920 RCOR2Q8IZ40 523 aa17.02■□□□□ 0.31
PTCH1-201ENST00000331920 CCDC185Q8N715 623 aa17.02■□□□□ 0.31
PTCH1-201ENST00000331920 SPATA18Q8TC71 538 aa17.02■□□□□ 0.31
PTCH1-201ENST00000331920 TRIM51Q9BSJ1 452 aa17.02■□□□□ 0.31
PTCH1-201ENST00000331920 FAM187AA6NFU0 413 aa17.02■□□□□ 0.31
PTCH1-201ENST00000331920 WEE2P0C1S8 567 aa17.02■□□□□ 0.31
PTCH1-201ENST00000331920 UGP2Q16851 508 aa17.02■□□□□ 0.31
PTCH1-201ENST00000331920 CIAPIN1Q6FI81 312 aa17.02■□□□□ 0.31
PTCH1-201ENST00000331920 CCDC33Q8N5R6 958 aa17.02■□□□□ 0.31
PTCH1-201ENST00000331920 MANSC1Q9H8J5 431 aa17.02■□□□□ 0.31
PTCH1-201ENST00000331920 CHKBQ9Y259 395 aa17.02■□□□□ 0.31
PTCH1-201ENST00000331920 POLR3AO14802 1390 aaPredicted RBP17.02■□□□□ 0.31
PTCH1-201ENST00000331920 C1orf232A0A0U1RR37 186 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 HMGB3O15347 200 aaKnown RBP17.01■□□□□ 0.31
PTCH1-201ENST00000331920 PSTPIP1O43586 416 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 OR6B1O95007 311 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 ACOT2P49753 483 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 CAMKK2Q96RR4 588 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 RUVBL2Q9Y230 463 aaKnown RBP17.01■□□□□ 0.31
PTCH1-201ENST00000331920 NESP48681 1621 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 LGALS16A8MUM7 142 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 ERVV-2B6SEH9 535 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 BTN3A3O00478 584 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 RARBP10826 455 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 ZNF24P17028 368 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 GRK4P32298 578 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 LAMB3Q13751 1172 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 RESP18Q5W5W9 173 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 LRRC74BQ6ZQY2 392 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 ATL2Q8NHH9 583 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 C18orf25Q96B23 403 aaPredicted RBP17.01■□□□□ 0.31
PTCH1-201ENST00000331920 MCRS1Q96EZ8 462 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 ANTXR1Q9H6X2 564 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 CATSPERBQ9H7T0 1116 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 VTI1BQ9UEU0 232 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 PMPCBO75439 489 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 ACADMP11310 421 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 KLHL12Q53G59 568 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 NRDE2Q9H7Z3 1164 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 KLHL3Q9UH77 587 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 AGAP1Q9UPQ3 857 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 CDY2AQ9Y6F7 541 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 CDY1Q9Y6F8 540 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 RTN2O75298 545 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 CEBPGP53567 150 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 TRPM8Q7Z2W7 1104 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 PROM2Q8N271 834 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 C21orf2O43822 256 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 RBMXL2O75526 392 aaKnown RBP17.01■□□□□ 0.31
PTCH1-201ENST00000331920 NPEPPSP55786 919 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 ZCWPW2Q504Y3 356 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 MED15Q96RN5 788 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 PTPRHQ9HD43 1115 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 CLK2P49760 499 aaKnown RBP17.01■□□□□ 0.31
PTCH1-201ENST00000331920 CCR4P51679 360 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 AP1S2P56377 157 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 ORC2Q13416 577 aaPredicted RBP17.01■□□□□ 0.31
PTCH1-201ENST00000331920 ZMYM1Q5SVZ6 1142 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 ZNF333Q96JL9 665 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 CYP4F12Q9HCS2 524 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 FEM1BQ9UK73 627 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 SMG5Q9UPR3 1016 aaKnown RBP17.01■□□□□ 0.31
PTCH1-201ENST00000331920 KDM5AP29375 1690 aaKnown RBP17.01■□□□□ 0.31
PTCH1-201ENST00000331920 KBTBD13C9JR72 458 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 NCAM1P13591 858 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 AGGF1Q8N302 714 aaeCLIP17.01■□□□□ 0.31
PTCH1-201ENST00000331920 RMND5AQ9H871 391 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 NDOR1Q9UHB4 597 aa17.01■□□□□ 0.31
PTCH1-201ENST00000331920 ERN1O75460 977 aaKnown RBP17■□□□□ 0.31
PTCH1-201ENST00000331920 CNPP09543 421 aaKnown RBP17■□□□□ 0.31
PTCH1-201ENST00000331920 RBM7Q9Y580 266 aaKnown RBP17■□□□□ 0.31
PTCH1-201ENST00000331920 FAM25EA8MYX2 175 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 CYP27B1O15528 508 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 HOXB7P09629 217 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 SPRP35270 261 aaPredicted RBP17■□□□□ 0.31
PTCH1-201ENST00000331920 CCT8P50990 548 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 PI16Q6UXB8 463 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 NLGN1Q8N2Q7 840 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 SLC35G2Q8TBE7 412 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 VAV3Q9UKW4 847 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 MTO1Q9Y2Z2 717 aaKnown RBP17■□□□□ 0.31
PTCH1-201ENST00000331920 BLMP54132 1417 aaPredicted RBP17■□□□□ 0.31
PTCH1-201ENST00000331920 A0A1W2PRG6 482 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17■□□□□ 0.31
PTCH1-201ENST00000331920 ASNSP08243 561 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 QARSP47897 775 aaKnown RBP17■□□□□ 0.31
PTCH1-201ENST00000331920 STARD3Q14849 445 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 NECAB2Q7Z6G3 386 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 CDK20Q8IZL9 346 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 MEI4A8MW99 385 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 FGRP09769 529 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 COPAP53621 1224 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 SNX17Q15036 470 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 SERAC1Q96JX3 654 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 C9orf72Q96LT7 481 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 OR6A2O95222 327 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 PRR29P0C7W0 189 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms