RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 NELL1Q92832 810 aa19.01■□□□□ 0.63
HDDC3-201ENST00000330334 CHRDQ9H2X0 955 aa19.01■□□□□ 0.63
HDDC3-201ENST00000330334 GTF3C3Q9Y5Q9 886 aa19.01■□□□□ 0.63
HDDC3-201ENST00000330334 MIA3Q5JRA6 1907 aa19.01■□□□□ 0.63
HDDC3-201ENST00000330334 COL4A3Q01955 1670 aa19.01■□□□□ 0.63
HDDC3-201ENST00000330334 EP300Q09472 2414 aaPredicted RBP19.01■□□□□ 0.63
HDDC3-201ENST00000330334 MYBPHLA2RUH7 354 aa19■□□□□ 0.63
HDDC3-201ENST00000330334 PRAMEF12O95522 483 aa19■□□□□ 0.63
HDDC3-201ENST00000330334 PFKFB1P16118 471 aa19■□□□□ 0.63
HDDC3-201ENST00000330334 LMO2P25791 158 aa19■□□□□ 0.63
HDDC3-201ENST00000330334 CDR1P51861 262 aa19■□□□□ 0.63
HDDC3-201ENST00000330334 AP3M2P53677 418 aa19■□□□□ 0.63
HDDC3-201ENST00000330334 CLDN10P78369 228 aa19■□□□□ 0.63
HDDC3-201ENST00000330334 CYP4F8P98187 520 aa19■□□□□ 0.63
HDDC3-201ENST00000330334 STK4Q13043 487 aa19■□□□□ 0.63
HDDC3-201ENST00000330334 VSTM1Q6UX27 236 aa19■□□□□ 0.63
HDDC3-201ENST00000330334 MON1AQ86VX9 555 aa19■□□□□ 0.63
HDDC3-201ENST00000330334 RALGPS2Q86X27 583 aaPredicted RBP19■□□□□ 0.63
HDDC3-201ENST00000330334 CCDC127Q96BQ5 260 aa19■□□□□ 0.63
HDDC3-201ENST00000330334 SPATA32Q96LK8 384 aa19■□□□□ 0.63
HDDC3-201ENST00000330334 FAM126AQ9BYI3 521 aaPredicted RBP19■□□□□ 0.63
HDDC3-201ENST00000330334 GZF1Q9H116 711 aaPredicted RBP19■□□□□ 0.63
HDDC3-201ENST00000330334 PRMT8Q9NR22 394 aaPredicted RBP19■□□□□ 0.63
HDDC3-201ENST00000330334 DMAC2Q9NW81 257 aa19■□□□□ 0.63
HDDC3-201ENST00000330334 THG1LQ9NWX6 298 aaKnown RBP19■□□□□ 0.63
HDDC3-201ENST00000330334 PCDHGA2Q9Y5H1 932 aa19■□□□□ 0.63
HDDC3-201ENST00000330334 ATP6V1DQ9Y5K8 247 aa19■□□□□ 0.63
HDDC3-201ENST00000330334 R4GN57 208 aa19■□□□□ 0.63
HDDC3-201ENST00000330334 FRYLO94915 3013 aa19■□□□□ 0.63
HDDC3-201ENST00000330334 A0A1B0GVL5 298 aa18.99■□□□□ 0.63
HDDC3-201ENST00000330334 EXOC3O60645 756 aa18.99■□□□□ 0.63
HDDC3-201ENST00000330334 CHRNB1P11230 501 aa18.99■□□□□ 0.63
HDDC3-201ENST00000330334 CCNE1P24864 410 aa18.99■□□□□ 0.63
HDDC3-201ENST00000330334 ATICP31939 592 aa18.99■□□□□ 0.63
HDDC3-201ENST00000330334 AVPR1AP37288 418 aa18.99■□□□□ 0.63
HDDC3-201ENST00000330334 MTAPQ13126 283 aa18.99■□□□□ 0.63
HDDC3-201ENST00000330334 DDR2Q16832 855 aa18.99■□□□□ 0.63
HDDC3-201ENST00000330334 GRAMD1CQ8IYS0 662 aa18.99■□□□□ 0.63
HDDC3-201ENST00000330334 ADSSL1Q8N142 457 aa18.99■□□□□ 0.63
HDDC3-201ENST00000330334 ZNF516Q92618 1163 aa18.99■□□□□ 0.63
HDDC3-201ENST00000330334 MRPS31Q92665 395 aaKnown RBP18.99■□□□□ 0.63
HDDC3-201ENST00000330334 SPATA17Q96L03 361 aa18.99■□□□□ 0.63
HDDC3-201ENST00000330334 MMS19Q96T76 1030 aa18.99■□□□□ 0.63
HDDC3-201ENST00000330334 SYT15Q9BQS2 421 aa18.99■□□□□ 0.63
HDDC3-201ENST00000330334 SCAND2PQ9GZW5 306 aaPredicted RBP18.99■□□□□ 0.63
HDDC3-201ENST00000330334 VRTNQ9H8Y1 702 aa18.99■□□□□ 0.63
HDDC3-201ENST00000330334 KIF9Q9HAQ2 790 aa18.99■□□□□ 0.63
HDDC3-201ENST00000330334 LMAN1LQ9HAT1 526 aa18.99■□□□□ 0.63
HDDC3-201ENST00000330334 EXOC1Q9NV70 894 aa18.99■□□□□ 0.63
HDDC3-201ENST00000330334 NDRG2Q9UN36 371 aaKnown RBP18.99■□□□□ 0.63
HDDC3-201ENST00000330334 COL4A2P08572 1712 aa18.99■□□□□ 0.63
HDDC3-201ENST00000330334 SLC38A8A6NNN8 435 aa18.98■□□□□ 0.63
HDDC3-201ENST00000330334 GNL1P36915 607 aaPredicted RBP18.98■□□□□ 0.63
HDDC3-201ENST00000330334 GPR15P49685 360 aa18.98■□□□□ 0.63
HDDC3-201ENST00000330334 KPNA1P52294 538 aaPredicted RBP18.98■□□□□ 0.63
HDDC3-201ENST00000330334 CSTF1Q05048 431 aaKnown RBP18.98■□□□□ 0.63
HDDC3-201ENST00000330334 ZNF268Q14587 947 aaPredicted RBP18.98■□□□□ 0.63
HDDC3-201ENST00000330334 KMT5BQ4FZB7 885 aa18.98■□□□□ 0.63
HDDC3-201ENST00000330334 GPIHBP1Q8IV16 184 aa18.98■□□□□ 0.63
HDDC3-201ENST00000330334 MAB21L3Q8N8X9 362 aa18.98■□□□□ 0.63
HDDC3-201ENST00000330334 ZBTB44Q8NCP5 570 aa18.98■□□□□ 0.63
HDDC3-201ENST00000330334 KIAA0895Q8NCT3 520 aa18.98■□□□□ 0.63
HDDC3-201ENST00000330334 MYCBPAPQ8TBZ2 947 aa18.98■□□□□ 0.63
HDDC3-201ENST00000330334 CRTAC1Q9NQ79 661 aa18.98■□□□□ 0.63
HDDC3-201ENST00000330334 TDP1Q9NUW8 608 aa18.98■□□□□ 0.63
HDDC3-201ENST00000330334 ZSCAN32Q9NX65 697 aa18.98■□□□□ 0.63
HDDC3-201ENST00000330334 MAGEC2Q9UBF1 373 aaPredicted RBP18.98■□□□□ 0.63
HDDC3-201ENST00000330334 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.97■□□□□ 0.63
HDDC3-201ENST00000330334 SPECC1L-ADORA2AF8WAN1 911 aa18.97■□□□□ 0.63
HDDC3-201ENST00000330334 PDXKO00764 312 aa18.97■□□□□ 0.63
HDDC3-201ENST00000330334 HCRTO43612 131 aa18.97■□□□□ 0.63
HDDC3-201ENST00000330334 ATP2C2O75185 946 aa18.97■□□□□ 0.63
HDDC3-201ENST00000330334 CTHP32929 405 aa18.97■□□□□ 0.63
HDDC3-201ENST00000330334 TRPC3Q13507 836 aa18.97■□□□□ 0.63
HDDC3-201ENST00000330334 PPP2R5DQ14738 602 aa18.97■□□□□ 0.63
HDDC3-201ENST00000330334 WDR72Q3MJ13 1102 aa18.97■□□□□ 0.63
HDDC3-201ENST00000330334 SDHAF4Q5VUM1 108 aa18.97■□□□□ 0.63
HDDC3-201ENST00000330334 PARD3BQ8TEW8 1205 aa18.97■□□□□ 0.63
HDDC3-201ENST00000330334 ATRIPQ8WXE1 791 aa18.97■□□□□ 0.63
HDDC3-201ENST00000330334 USP13Q92995 863 aaPredicted RBP18.97■□□□□ 0.63
HDDC3-201ENST00000330334 SYAP1Q96A49 352 aaPredicted RBP18.97■□□□□ 0.63
HDDC3-201ENST00000330334 FAM83CQ9BQN1 747 aa18.97■□□□□ 0.63
HDDC3-201ENST00000330334 XYLT2Q9H1B5 865 aa18.97■□□□□ 0.63
HDDC3-201ENST00000330334 KCTD10Q9H3F6 313 aa18.97■□□□□ 0.63
HDDC3-201ENST00000330334 MAGED2Q9UNF1 606 aaPredicted RBP18.97■□□□□ 0.63
HDDC3-201ENST00000330334 A0A1W2PQ27 194 aa18.96■□□□□ 0.63
HDDC3-201ENST00000330334 A0A1W2PQ64 194 aa18.96■□□□□ 0.63
HDDC3-201ENST00000330334 A0A1W2PQD8 194 aa18.96■□□□□ 0.63
HDDC3-201ENST00000330334 KINO60870 393 aaKnown RBP18.96■□□□□ 0.63
HDDC3-201ENST00000330334 PDGFRBP09619 1106 aa18.96■□□□□ 0.63
HDDC3-201ENST00000330334 SYKP43405 635 aa18.96■□□□□ 0.63
HDDC3-201ENST00000330334 NRLP54845 237 aa18.96■□□□□ 0.63
HDDC3-201ENST00000330334 TNNC1P63316 161 aa18.96■□□□□ 0.63
HDDC3-201ENST00000330334 LRRC32Q14392 662 aa18.96■□□□□ 0.63
HDDC3-201ENST00000330334 ITPRIPL2Q3MIP1 535 aa18.96■□□□□ 0.63
HDDC3-201ENST00000330334 DGKKQ5KSL6 1271 aa18.96■□□□□ 0.63
HDDC3-201ENST00000330334 TXNDC8Q6A555 127 aa18.96■□□□□ 0.63
HDDC3-201ENST00000330334 FSIP1Q8NA03 581 aa18.96■□□□□ 0.63
HDDC3-201ENST00000330334 ZFYVE19Q96K21 471 aa18.96■□□□□ 0.63
HDDC3-201ENST00000330334 MRPL45Q9BRJ2 306 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms