RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 SDHAF4Q5VUM1 108 aa29.49■■■□□ 2.31
ATPAF1-201ENST00000329231 VSTM1Q6UX27 236 aa29.49■■■□□ 2.31
ATPAF1-201ENST00000329231 SCN4BQ8IWT1 228 aa29.49■■■□□ 2.31
ATPAF1-201ENST00000329231 DEPDC1BQ8WUY9 529 aa29.49■■■□□ 2.31
ATPAF1-201ENST00000329231 TRMT61BQ9BVS5 477 aaKnown RBP29.49■■■□□ 2.31
ATPAF1-201ENST00000329231 TASP1Q9H6P5 420 aa29.49■■■□□ 2.31
ATPAF1-201ENST00000329231 TBC1D17Q9HA65 648 aa29.49■■■□□ 2.31
ATPAF1-201ENST00000329231 UXTQ9UBK9 157 aaPredicted RBP29.49■■■□□ 2.31
ATPAF1-201ENST00000329231 ZMYM5Q9UJ78 669 aa29.49■■■□□ 2.31
ATPAF1-201ENST00000329231 A8MXQ7 604 aa29.48■■■□□ 2.31
ATPAF1-201ENST00000329231 TRIM49P0CI25 452 aa29.48■■■□□ 2.31
ATPAF1-201ENST00000329231 TRIM49CP0CI26 452 aa29.48■■■□□ 2.31
ATPAF1-201ENST00000329231 EPB41P11171 864 aaKnown RBP29.48■■■□□ 2.31
ATPAF1-201ENST00000329231 PSMC3P17980 439 aa29.48■■■□□ 2.31
ATPAF1-201ENST00000329231 PTPN1P18031 435 aaKnown RBP29.48■■■□□ 2.31
ATPAF1-201ENST00000329231 PLA2G5P39877 138 aa29.48■■■□□ 2.31
ATPAF1-201ENST00000329231 VIPR2P41587 438 aa29.48■■■□□ 2.31
ATPAF1-201ENST00000329231 PIK3CAP42336 1068 aa29.48■■■□□ 2.31
ATPAF1-201ENST00000329231 CYP27A1Q02318 531 aa29.48■■■□□ 2.31
ATPAF1-201ENST00000329231 STIM1Q13586 685 aa29.48■■■□□ 2.31
ATPAF1-201ENST00000329231 PHLDB3Q6NSJ2 640 aa29.48■■■□□ 2.31
ATPAF1-201ENST00000329231 ADSSL1Q8N142 457 aa29.48■■■□□ 2.31
ATPAF1-201ENST00000329231 PCED1BQ96HM7 432 aa29.48■■■□□ 2.31
ATPAF1-201ENST00000329231 SMYD3Q9H7B4 428 aa29.48■■■□□ 2.31
ATPAF1-201ENST00000329231 MAGED2Q9UNF1 606 aaPredicted RBP29.48■■■□□ 2.31
ATPAF1-201ENST00000329231 NME7Q9Y5B8 376 aa29.48■■■□□ 2.31
ATPAF1-201ENST00000329231 KMT2EQ8IZD2 1858 aa29.48■■■□□ 2.31
ATPAF1-201ENST00000329231 HLA-DRAP01903 254 aa29.47■■■□□ 2.31
ATPAF1-201ENST00000329231 BDNFP23560 247 aa29.47■■■□□ 2.31
ATPAF1-201ENST00000329231 GCLMP48507 274 aa29.47■■■□□ 2.31
ATPAF1-201ENST00000329231 NLRP12P59046 1061 aa29.47■■■□□ 2.31
ATPAF1-201ENST00000329231 GRM2Q14416 872 aa29.47■■■□□ 2.31
ATPAF1-201ENST00000329231 SLC44A4Q53GD3 710 aa29.47■■■□□ 2.31
ATPAF1-201ENST00000329231 MDH1BQ5I0G3 518 aa29.47■■■□□ 2.31
ATPAF1-201ENST00000329231 VITQ6UXI7 678 aa29.47■■■□□ 2.31
ATPAF1-201ENST00000329231 ARID3BQ8IVW6 561 aaPredicted RBP29.47■■■□□ 2.31
ATPAF1-201ENST00000329231 IMPG2Q9BZV3 1241 aa29.47■■■□□ 2.31
ATPAF1-201ENST00000329231 BRD9Q9H8M2 597 aa29.47■■■□□ 2.31
ATPAF1-201ENST00000329231 SLC38A8A6NNN8 435 aa29.46■■■□□ 2.31
ATPAF1-201ENST00000329231 NOL4O94818 638 aa29.46■■■□□ 2.31
ATPAF1-201ENST00000329231 ASS1P00966 412 aaKnown RBP29.46■■■□□ 2.31
ATPAF1-201ENST00000329231 GTF2H1P32780 548 aa29.46■■■□□ 2.31
ATPAF1-201ENST00000329231 PPP1R2P41236 205 aa29.46■■■□□ 2.31
ATPAF1-201ENST00000329231 CDH8P55286 799 aa29.46■■■□□ 2.31
ATPAF1-201ENST00000329231 STARD6P59095 220 aa29.46■■■□□ 2.31
ATPAF1-201ENST00000329231 MCCD1P59942 119 aaPredicted RBP29.46■■■□□ 2.31
ATPAF1-201ENST00000329231 CYP4F8P98187 520 aa29.46■■■□□ 2.31
ATPAF1-201ENST00000329231 FKBP3Q00688 224 aaKnown RBP29.46■■■□□ 2.31
ATPAF1-201ENST00000329231 PRKCQQ04759 706 aa29.46■■■□□ 2.31
ATPAF1-201ENST00000329231 LRRC63Q05C16 580 aa29.46■■■□□ 2.31
ATPAF1-201ENST00000329231 PPP3CAQ08209 521 aa29.46■■■□□ 2.31
ATPAF1-201ENST00000329231 MLF2Q15773 248 aaPredicted RBP29.46■■■□□ 2.31
ATPAF1-201ENST00000329231 SCARA5Q6ZMJ2 495 aa29.46■■■□□ 2.31
ATPAF1-201ENST00000329231 MFSD6LQ8IWD5 586 aa29.46■■■□□ 2.31
ATPAF1-201ENST00000329231 B3GALNT2Q8NCR0 500 aa29.46■■■□□ 2.31
ATPAF1-201ENST00000329231 PRSS33Q8NF86 280 aa29.46■■■□□ 2.31
ATPAF1-201ENST00000329231 DNASE1L2Q92874 299 aa29.46■■■□□ 2.31
ATPAF1-201ENST00000329231 EEF2KMTQ96G04 330 aa29.46■■■□□ 2.31
ATPAF1-201ENST00000329231 TRMT2BQ96GJ1 504 aaKnown RBP29.46■■■□□ 2.31
ATPAF1-201ENST00000329231 CEP295NLQ96MC4 621 aa29.46■■■□□ 2.31
ATPAF1-201ENST00000329231 MAN1B1Q9UKM7 699 aa29.46■■■□□ 2.31
ATPAF1-201ENST00000329231 HEPACAM2A8MVW5 462 aa29.45■■■□□ 2.31
ATPAF1-201ENST00000329231 DPYSL4O14531 572 aa29.45■■■□□ 2.31
ATPAF1-201ENST00000329231 PSMA7O14818 248 aa29.45■■■□□ 2.31
ATPAF1-201ENST00000329231 F11P03951 625 aa29.45■■■□□ 2.31
ATPAF1-201ENST00000329231 WEE1P30291 646 aa29.45■■■□□ 2.31
ATPAF1-201ENST00000329231 GRIK1P39086 918 aa29.45■■■□□ 2.31
ATPAF1-201ENST00000329231 PTPN5P54829 565 aa29.45■■■□□ 2.31
ATPAF1-201ENST00000329231 UBE2HP62256 183 aa29.45■■■□□ 2.31
ATPAF1-201ENST00000329231 ANKRD40Q6AI12 368 aa29.45■■■□□ 2.31
ATPAF1-201ENST00000329231 STKLD1Q8NE28 680 aa29.45■■■□□ 2.31
ATPAF1-201ENST00000329231 IRF7Q92985 503 aa29.45■■■□□ 2.31
ATPAF1-201ENST00000329231 ELMO3Q96BJ8 720 aa29.45■■■□□ 2.31
ATPAF1-201ENST00000329231 TNIP3Q96KP6 325 aa29.45■■■□□ 2.31
ATPAF1-201ENST00000329231 MYRFLQ96LU7 910 aa29.45■■■□□ 2.31
ATPAF1-201ENST00000329231 DPEP3Q9H4B8 488 aa29.45■■■□□ 2.31
ATPAF1-201ENST00000329231 TMEM8AQ9HCN3 771 aa29.45■■■□□ 2.31
ATPAF1-201ENST00000329231 MUC6Q6W4X9 2439 aa29.44■■■□□ 2.3
ATPAF1-201ENST00000329231 TRIM66O15016 1216 aa29.44■■■□□ 2.3
ATPAF1-201ENST00000329231 PI15O43692 258 aa29.44■■■□□ 2.3
ATPAF1-201ENST00000329231 STX10O60499 249 aa29.44■■■□□ 2.3
ATPAF1-201ENST00000329231 DDX6P26196 483 aaKnown RBP eCLIP29.44■■■□□ 2.3
ATPAF1-201ENST00000329231 ANXA13P27216 316 aa29.44■■■□□ 2.3
ATPAF1-201ENST00000329231 RAP1GAPP47736 663 aa29.44■■■□□ 2.3
ATPAF1-201ENST00000329231 ISM2Q6H9L7 571 aa29.44■■■□□ 2.3
ATPAF1-201ENST00000329231 TMEM150AQ86TG1 271 aa29.44■■■□□ 2.3
ATPAF1-201ENST00000329231 MRPS31Q92665 395 aaKnown RBP29.44■■■□□ 2.3
ATPAF1-201ENST00000329231 DHTKD1Q96HY7 919 aaPredicted RBP29.44■■■□□ 2.3
ATPAF1-201ENST00000329231 SPATA17Q96L03 361 aa29.44■■■□□ 2.3
ATPAF1-201ENST00000329231 MMRN2Q9H8L6 949 aa29.44■■■□□ 2.3
ATPAF1-201ENST00000329231 SOBPA7XYQ1 873 aa29.43■■■□□ 2.3
ATPAF1-201ENST00000329231 SLC16A3O15427 465 aaKnown RBP29.43■■■□□ 2.3
ATPAF1-201ENST00000329231 GALR2O43603 387 aaPredicted RBP29.43■■■□□ 2.3
ATPAF1-201ENST00000329231 GDI1P31150 447 aa29.43■■■□□ 2.3
ATPAF1-201ENST00000329231 KRT39Q6A163 491 aa29.43■■■□□ 2.3
ATPAF1-201ENST00000329231 ZC3H3Q8IXZ2 948 aaKnown RBP29.43■■■□□ 2.3
ATPAF1-201ENST00000329231 YAF2Q8IY57 180 aa29.43■■■□□ 2.3
ATPAF1-201ENST00000329231 CCDC150Q8NCX0 1101 aa29.43■■■□□ 2.3
ATPAF1-201ENST00000329231 TAS1R2Q8TE23 839 aa29.43■■■□□ 2.3
ATPAF1-201ENST00000329231 SLC46A2Q9BY10 475 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms