RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 BOLA2-SMG1P6H3BVE0 249 aa17.33■□□□□ 0.36
PACS1-201ENST00000320580 DAB1O75553 588 aa17.33■□□□□ 0.36
PACS1-201ENST00000320580 NELFEP18615 380 aaKnown RBP17.33■□□□□ 0.36
PACS1-201ENST00000320580 PAX3P23760 479 aa17.33■□□□□ 0.36
PACS1-201ENST00000320580 RPS8P62241 208 aaKnown RBP17.33■□□□□ 0.36
PACS1-201ENST00000320580 MTA1Q13330 715 aa17.33■□□□□ 0.36
PACS1-201ENST00000320580 TTC7BQ86TV6 843 aa17.33■□□□□ 0.36
PACS1-201ENST00000320580 C10orf82Q8WW14 230 aa17.33■□□□□ 0.36
PACS1-201ENST00000320580 ADAM7Q9H2U9 754 aa17.33■□□□□ 0.36
PACS1-201ENST00000320580 SEPT3Q9UH03 358 aa17.33■□□□□ 0.36
PACS1-201ENST00000320580 GMEB1Q9Y692 573 aa17.33■□□□□ 0.36
PACS1-201ENST00000320580 DEAF1O75398 565 aaPredicted RBP17.33■□□□□ 0.36
PACS1-201ENST00000320580 LRRC8EQ6NSJ5 796 aa17.33■□□□□ 0.36
PACS1-201ENST00000320580 C16orf89Q6UX73 402 aa17.33■□□□□ 0.36
PACS1-201ENST00000320580 FBXO11Q86XK2 927 aa17.33■□□□□ 0.36
PACS1-201ENST00000320580 PPP1R14BQ96C90 147 aa17.33■□□□□ 0.36
PACS1-201ENST00000320580 RUSC1Q9BVN2 902 aa17.33■□□□□ 0.36
PACS1-201ENST00000320580 S100A14Q9HCY8 104 aa17.33■□□□□ 0.36
PACS1-201ENST00000320580 MAD2L2Q9UI95 211 aa17.33■□□□□ 0.36
PACS1-201ENST00000320580 HNRNPDLO14979 420 aaKnown RBP17.32■□□□□ 0.36
PACS1-201ENST00000320580 NFKBIAP25963 317 aa17.32■□□□□ 0.36
PACS1-201ENST00000320580 EXOC8Q8IYI6 725 aa17.32■□□□□ 0.36
PACS1-201ENST00000320580 TTC13Q8NBP0 860 aa17.32■□□□□ 0.36
PACS1-201ENST00000320580 HSPH1Q92598 858 aa17.32■□□□□ 0.36
PACS1-201ENST00000320580 ACSF2Q96CM8 615 aaPredicted RBP17.32■□□□□ 0.36
PACS1-201ENST00000320580 SNX13Q9Y5W8 968 aa17.32■□□□□ 0.36
PACS1-201ENST00000320580 ZBED1O96006 694 aa17.32■□□□□ 0.36
PACS1-201ENST00000320580 PTGIRP43119 386 aa17.32■□□□□ 0.36
PACS1-201ENST00000320580 CCNG2Q16589 344 aa17.32■□□□□ 0.36
PACS1-201ENST00000320580 NRF1Q16656 503 aa17.32■□□□□ 0.36
PACS1-201ENST00000320580 DCLK2Q8N568 766 aa17.32■□□□□ 0.36
PACS1-201ENST00000320580 SDCCAG3Q96C92 435 aa17.32■□□□□ 0.36
PACS1-201ENST00000320580 GPR101Q96P66 508 aaPredicted RBP17.32■□□□□ 0.36
PACS1-201ENST00000320580 PCSK1NQ9UHG2 260 aa17.32■□□□□ 0.36
PACS1-201ENST00000320580 MAGED2Q9UNF1 606 aaPredicted RBP17.32■□□□□ 0.36
PACS1-201ENST00000320580 MATN2O00339 956 aa17.32■□□□□ 0.36
PACS1-201ENST00000320580 COQ9O75208 318 aa17.32■□□□□ 0.36
PACS1-201ENST00000320580 ZSCAN5DPP0CG00 497 aa17.32■□□□□ 0.36
PACS1-201ENST00000320580 POLR2BP30876 1174 aaKnown RBP17.32■□□□□ 0.36
PACS1-201ENST00000320580 FUT2Q10981 343 aa17.32■□□□□ 0.36
PACS1-201ENST00000320580 TRIM28Q13263 835 aaKnown RBP17.32■□□□□ 0.36
PACS1-201ENST00000320580 VPS72Q15906 364 aa17.32■□□□□ 0.36
PACS1-201ENST00000320580 TEDDM1Q5T9Z0 273 aa17.32■□□□□ 0.36
PACS1-201ENST00000320580 JADE1Q6IE81 842 aa17.32■□□□□ 0.36
PACS1-201ENST00000320580 BARX2Q9UMQ3 279 aaPredicted RBP17.32■□□□□ 0.36
PACS1-201ENST00000320580 GOLGA8QA0A0J9YX86 632 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 GOLGA8OA6NCC3 632 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 GOLGA8NF8WBI6 632 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 TM7SF2O76062 418 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 CCDC130P13994 396 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 PSMA2P25787 234 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 GPATCH4Q5T3I0 446 aaKnown RBP17.31■□□□□ 0.36
PACS1-201ENST00000320580 DENND5BQ6ZUT9 1274 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 BEGAINQ9BUH8 593 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 ZC3H7BQ9UGR2 993 aaKnown RBP17.31■□□□□ 0.36
PACS1-201ENST00000320580 NFAT5O94916 1531 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 E2F8A0AVK6 867 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 C6orf222P0C671 652 aaPredicted RBP17.31■□□□□ 0.36
PACS1-201ENST00000320580 SERPINB5P36952 375 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 ECE1P42892 770 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 NFX1Q12986 1120 aaKnown RBP17.31■□□□□ 0.36
PACS1-201ENST00000320580 MPP2Q14168 576 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 XKR9Q5GH70 373 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 TMC5Q6UXY8 1006 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 ZCCHC23Q6ZST2 131 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 SPATA7Q9P0W8 599 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 MYRFQ9Y2G1 1151 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 ZBTB39O15060 712 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 FOSP01100 380 aaPredicted RBP17.31■□□□□ 0.36
PACS1-201ENST00000320580 HOXA13P31271 388 aaPredicted RBP17.31■□□□□ 0.36
PACS1-201ENST00000320580 TMEM63BQ5T3F8 832 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 SPOPLQ6IQ16 392 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 AAGABQ6PD74 315 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 KCNK4Q9NYG8 393 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 PKD2L2Q9NZM6 624 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 SLC17A7Q9P2U7 560 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 LNPEPQ9UIQ6 1025 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 UBAP2LQ14157 1087 aaKnown RBP17.31■□□□□ 0.36
PACS1-201ENST00000320580 PRPSAP1Q14558 356 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 MAPK6Q16659 721 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 TTC39BQ5VTQ0 682 aaPredicted RBP17.31■□□□□ 0.36
PACS1-201ENST00000320580 RCOR2Q8IZ40 523 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 ETNPPLQ8TBG4 499 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 LRRC19Q9H756 370 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 GIMAP4Q9NUV9 329 aa17.31■□□□□ 0.36
PACS1-201ENST00000320580 IGSF9BQ9UPX0 1349 aa17.3■□□□□ 0.36
PACS1-201ENST00000320580 TYK2P29597 1187 aa17.3■□□□□ 0.36
PACS1-201ENST00000320580 MORF4L2Q15014 288 aa17.3■□□□□ 0.36
PACS1-201ENST00000320580 NKX1-1Q15270 411 aaPredicted RBP17.3■□□□□ 0.36
PACS1-201ENST00000320580 WDR72Q3MJ13 1102 aa17.3■□□□□ 0.36
PACS1-201ENST00000320580 SUSD4Q5VX71 490 aa17.3■□□□□ 0.36
PACS1-201ENST00000320580 TMEM270Q6UE05 265 aa17.3■□□□□ 0.36
PACS1-201ENST00000320580 PPIL6Q8IXY8 311 aa17.3■□□□□ 0.36
PACS1-201ENST00000320580 ZCCHC9Q8N567 271 aaKnown RBP17.3■□□□□ 0.36
PACS1-201ENST00000320580 USP13Q92995 863 aaPredicted RBP17.3■□□□□ 0.36
PACS1-201ENST00000320580 VPS50Q96JG6 964 aa17.3■□□□□ 0.36
PACS1-201ENST00000320580 COX4I2Q96KJ9 171 aa17.3■□□□□ 0.36
PACS1-201ENST00000320580 TMEM121Q9BTD3 319 aa17.3■□□□□ 0.36
PACS1-201ENST00000320580 IVNS1ABPQ9Y6Y0 642 aa17.3■□□□□ 0.36
PACS1-201ENST00000320580 ZNF142P52746 1687 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms