RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 ADGRF2Q8IZF7 708 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 CSGALNACT2Q8N6G5 542 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 ATAD1Q8NBU5 361 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 BPIFB1Q8TDL5 484 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 SYAP1Q96A49 352 aaPredicted RBP9.03□□□□□ -0.96
MSL3-201ENST00000312196 HPDLQ96IR7 371 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 TMEM209Q96SK2 561 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 IL37Q9NZH6 218 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 CDV3Q9UKY7 258 aaKnown RBP9.03□□□□□ -0.96
MSL3-201ENST00000312196 TIMM13Q9Y5L4 95 aaPredicted RBP9.03□□□□□ -0.96
MSL3-201ENST00000312196 SLC38A8A6NNN8 435 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 TRDMT1O14717 391 aaKnown RBP9.03□□□□□ -0.96
MSL3-201ENST00000312196 OR4Q2P0C623 313 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 GABRR2P28476 465 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 GDI1P31150 447 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 CXCL12P48061 93 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 WNT7BP56706 349 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 NOP14P78316 857 aaKnown RBP9.03□□□□□ -0.96
MSL3-201ENST00000312196 KCNB1Q14721 858 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 SOWAHAQ2M3V2 549 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 SNX30Q5VWJ9 437 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 TRAPPC11Q7Z392 1133 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 TMEM150AQ86TG1 271 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 OSTM1Q86WC4 334 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 ARID3BQ8IVW6 561 aaPredicted RBP9.03□□□□□ -0.96
MSL3-201ENST00000312196 CEP57L1Q8IYX8 460 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 CMTM8Q8IZV2 173 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 MRPS31Q92665 395 aaKnown RBP9.03□□□□□ -0.96
MSL3-201ENST00000312196 CCDC47Q96A33 483 aaKnown RBP9.03□□□□□ -0.96
MSL3-201ENST00000312196 DHX58Q96C10 678 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 RSPRY1Q96DX4 576 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 FAM83CQ9BQN1 747 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 DDX43Q9NXZ2 648 aaKnown RBP9.03□□□□□ -0.96
MSL3-201ENST00000312196 GCNT4Q9P109 453 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 MAGEC2Q9UBF1 373 aaPredicted RBP9.03□□□□□ -0.96
MSL3-201ENST00000312196 TRAF3IP3Q9Y228 551 aa9.03□□□□□ -0.96
MSL3-201ENST00000312196 R3HCC1Q9Y3T6 440 aaKnown RBP9.03□□□□□ -0.96
MSL3-201ENST00000312196 HELZP42694 1942 aaKnown RBP9.03□□□□□ -0.96
MSL3-201ENST00000312196 GREB1Q4ZG55 1949 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 TICRRQ7Z2Z1 1910 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 DPYSL4O14531 572 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 IKBKBO14920 756 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 ATG13O75143 517 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 USP17L7P0C7H9 530 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 SHC2P98077 582 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 SNRNP35Q16560 246 aaKnown RBP9.02□□□□□ -0.97
MSL3-201ENST00000312196 ITPRIPL2Q3MIP1 535 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 FOXR2Q6PJQ5 311 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 DDX42Q86XP3 938 aaKnown RBP eCLIP9.02□□□□□ -0.97
MSL3-201ENST00000312196 ZNF276Q8N554 614 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 TTC39CQ8N584 583 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 MYCBPAPQ8TBZ2 947 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 KBTBD7Q8WVZ9 684 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 SAAL1Q96ER3 474 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 FGFBP2Q9BYJ0 223 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 DNAI2Q9GZS0 605 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 ATXN3LQ9H3M9 355 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 PDE11AQ9HCR9 933 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 MTF2Q9Y483 593 aaPredicted RBP9.02□□□□□ -0.97
MSL3-201ENST00000312196 PIAS3Q9Y6X2 628 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 KIAA1549LQ6ZVL6 1849 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 A0A1W2PRU2 124 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 POLR2DO15514 142 aaKnown RBP9.02□□□□□ -0.97
MSL3-201ENST00000312196 OLFM2O95897 454 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 ADRB1P08588 477 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 GTF2H1P32780 548 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 TUBP50607 506 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 SLC7A9P82251 487 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 MTAPQ13126 283 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 MGAT5BQ3V5L5 792 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 FBXO43Q4G163 708 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 UNC93AQ86WB7 457 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 SPATA2LQ8IUW3 424 aaPredicted RBP9.02□□□□□ -0.97
MSL3-201ENST00000312196 FSIP1Q8NA03 581 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 PDZD8Q8NEN9 1154 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 PAGE5Q96GU1 130 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 SYT15Q9BQS2 421 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 SLC46A2Q9BY10 475 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 SCAND2PQ9GZW5 306 aaPredicted RBP9.02□□□□□ -0.97
MSL3-201ENST00000312196 LMAN1LQ9HAT1 526 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 TMLHEQ9NVH6 421 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 TFIP11Q9UBB9 837 aaKnown RBP9.02□□□□□ -0.97
MSL3-201ENST00000312196 ARHGAP26Q9UNA1 814 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 SLC27A5Q9Y2P5 690 aa9.02□□□□□ -0.97
MSL3-201ENST00000312196 TRAV19A0A0A6YYK7 116 aa9.01□□□□□ -0.97
MSL3-201ENST00000312196 SPECC1L-ADORA2AF8WAN1 911 aa9.01□□□□□ -0.97
MSL3-201ENST00000312196 NRG2O14511 850 aaPredicted RBP9.01□□□□□ -0.97
MSL3-201ENST00000312196 RHOBTB3O94955 611 aa9.01□□□□□ -0.97
MSL3-201ENST00000312196 CEBPZQ03701 1054 aaKnown RBP9.01□□□□□ -0.97
MSL3-201ENST00000312196 HSF5Q4G112 596 aaPredicted RBP9.01□□□□□ -0.97
MSL3-201ENST00000312196 CBWD2Q8IUF1 395 aa9.01□□□□□ -0.97
MSL3-201ENST00000312196 CAMKK1Q8N5S9 505 aa9.01□□□□□ -0.97
MSL3-201ENST00000312196 FAM200AQ8TCP9 573 aa9.01□□□□□ -0.97
MSL3-201ENST00000312196 CCDC34Q96HJ3 373 aa9.01□□□□□ -0.97
MSL3-201ENST00000312196 ZC3H10Q96K80 434 aaKnown RBP9.01□□□□□ -0.97
MSL3-201ENST00000312196 PGLYRP2Q96PD5 576 aa9.01□□□□□ -0.97
MSL3-201ENST00000312196 MTMR12Q9C0I1 747 aa9.01□□□□□ -0.97
MSL3-201ENST00000312196 ELOVL4Q9GZR5 314 aa9.01□□□□□ -0.97
MSL3-201ENST00000312196 GZF1Q9H116 711 aaPredicted RBP9.01□□□□□ -0.97
MSL3-201ENST00000312196 KCTD10Q9H3F6 313 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms