RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 CCNE1P24864 410 aa19.53■□□□□ 0.72
TMEM88-201ENST00000301599 LMO2P25791 158 aa19.53■□□□□ 0.72
TMEM88-201ENST00000301599 GNL1P36915 607 aaPredicted RBP19.53■□□□□ 0.72
TMEM88-201ENST00000301599 AVPR1AP37288 418 aa19.53■□□□□ 0.72
TMEM88-201ENST00000301599 MAGEA11P43364 429 aa19.53■□□□□ 0.72
TMEM88-201ENST00000301599 PLCB2Q00722 1185 aa19.53■□□□□ 0.72
TMEM88-201ENST00000301599 STK4Q13043 487 aa19.53■□□□□ 0.72
TMEM88-201ENST00000301599 TRPC3Q13507 836 aa19.53■□□□□ 0.72
TMEM88-201ENST00000301599 MAPRE1Q15691 268 aaKnown RBP19.53■□□□□ 0.72
TMEM88-201ENST00000301599 SDHAF4Q5VUM1 108 aa19.53■□□□□ 0.72
TMEM88-201ENST00000301599 MAMSTRQ6ZN01 415 aa19.53■□□□□ 0.72
TMEM88-201ENST00000301599 TMEM150AQ86TG1 271 aa19.53■□□□□ 0.72
TMEM88-201ENST00000301599 ADSSL1Q8N142 457 aa19.53■□□□□ 0.72
TMEM88-201ENST00000301599 MAB21L3Q8N8X9 362 aa19.53■□□□□ 0.72
TMEM88-201ENST00000301599 KBTBD7Q8WVZ9 684 aa19.53■□□□□ 0.72
TMEM88-201ENST00000301599 ZNF516Q92618 1163 aa19.53■□□□□ 0.72
TMEM88-201ENST00000301599 MYRFLQ96LU7 910 aa19.53■□□□□ 0.72
TMEM88-201ENST00000301599 SYT15Q9BQS2 421 aa19.53■□□□□ 0.72
TMEM88-201ENST00000301599 CACNA1IQ9P0X4 2223 aa19.52■□□□□ 0.72
TMEM88-201ENST00000301599 SLC38A8A6NNN8 435 aa19.52■□□□□ 0.72
TMEM88-201ENST00000301599 HCRTO43612 131 aa19.52■□□□□ 0.72
TMEM88-201ENST00000301599 ATP2C2O75185 946 aa19.52■□□□□ 0.72
TMEM88-201ENST00000301599 TACC1O75410 805 aa19.52■□□□□ 0.72
TMEM88-201ENST00000301599 PDGFRBP09619 1106 aa19.52■□□□□ 0.72
TMEM88-201ENST00000301599 AP3M2P53677 418 aa19.52■□□□□ 0.72
TMEM88-201ENST00000301599 WDR72Q3MJ13 1102 aa19.52■□□□□ 0.72
TMEM88-201ENST00000301599 KMT5BQ4FZB7 885 aa19.52■□□□□ 0.72
TMEM88-201ENST00000301599 MON1AQ86VX9 555 aa19.52■□□□□ 0.72
TMEM88-201ENST00000301599 SCN4BQ8IWT1 228 aa19.52■□□□□ 0.72
TMEM88-201ENST00000301599 TRMT2BQ96GJ1 504 aaKnown RBP19.52■□□□□ 0.72
TMEM88-201ENST00000301599 IER2Q9BTL4 223 aa19.52■□□□□ 0.72
TMEM88-201ENST00000301599 SCAND2PQ9GZW5 306 aaPredicted RBP19.52■□□□□ 0.72
TMEM88-201ENST00000301599 SNX25Q9H3E2 840 aa19.52■□□□□ 0.72
TMEM88-201ENST00000301599 HPSEQ9Y251 543 aa19.52■□□□□ 0.72
TMEM88-201ENST00000301599 USP34Q70CQ2 3546 aa19.52■□□□□ 0.71
TMEM88-201ENST00000301599 COL4A3Q01955 1670 aa19.52■□□□□ 0.71
TMEM88-201ENST00000301599 RIF1Q5UIP0 2472 aaKnown RBP19.51■□□□□ 0.71
TMEM88-201ENST00000301599 F5P12259 2224 aa19.51■□□□□ 0.71
TMEM88-201ENST00000301599 PHACTR2O75167 634 aa19.51■□□□□ 0.71
TMEM88-201ENST00000301599 NOL4O94818 638 aa19.51■□□□□ 0.71
TMEM88-201ENST00000301599 PRAMEF12O95522 483 aa19.51■□□□□ 0.71
TMEM88-201ENST00000301599 ATICP31939 592 aa19.51■□□□□ 0.71
TMEM88-201ENST00000301599 SYKP43405 635 aa19.51■□□□□ 0.71
TMEM88-201ENST00000301599 MTAPQ13126 283 aa19.51■□□□□ 0.71
TMEM88-201ENST00000301599 TXNDC8Q6A555 127 aa19.51■□□□□ 0.71
TMEM88-201ENST00000301599 VSTM1Q6UX27 236 aa19.51■□□□□ 0.71
TMEM88-201ENST00000301599 RALGPS2Q86X27 583 aaPredicted RBP19.51■□□□□ 0.71
TMEM88-201ENST00000301599 TMEM174Q8WUU8 243 aa19.51■□□□□ 0.71
TMEM88-201ENST00000301599 CCDC47Q96A33 483 aaKnown RBP19.51■□□□□ 0.71
TMEM88-201ENST00000301599 CHRDQ9H2X0 955 aa19.51■□□□□ 0.71
TMEM88-201ENST00000301599 TDP1Q9NUW8 608 aa19.51■□□□□ 0.71
TMEM88-201ENST00000301599 DMAC2Q9NW81 257 aa19.51■□□□□ 0.71
TMEM88-201ENST00000301599 MIA3Q5JRA6 1907 aa19.51■□□□□ 0.71
TMEM88-201ENST00000301599 PDXKO00764 312 aa19.5■□□□□ 0.71
TMEM88-201ENST00000301599 STAU1O95793 577 aaKnown RBP19.5■□□□□ 0.71
TMEM88-201ENST00000301599 PSMC1P62191 440 aaKnown RBP19.5■□□□□ 0.71
TMEM88-201ENST00000301599 TNNC1P63316 161 aa19.5■□□□□ 0.71
TMEM88-201ENST00000301599 SLC9A9Q8IVB4 645 aa19.5■□□□□ 0.71
TMEM88-201ENST00000301599 FSIP1Q8NA03 581 aa19.5■□□□□ 0.71
TMEM88-201ENST00000301599 KIAA0895Q8NCT3 520 aa19.5■□□□□ 0.71
TMEM88-201ENST00000301599 OR6B3Q8NGW1 331 aa19.5■□□□□ 0.71
TMEM88-201ENST00000301599 MYCBPAPQ8TBZ2 947 aa19.5■□□□□ 0.71
TMEM88-201ENST00000301599 PARD3BQ8TEW8 1205 aa19.5■□□□□ 0.71
TMEM88-201ENST00000301599 ATRIPQ8WXE1 791 aa19.5■□□□□ 0.71
TMEM88-201ENST00000301599 SYAP1Q96A49 352 aaPredicted RBP19.5■□□□□ 0.71
TMEM88-201ENST00000301599 ZFYVE19Q96K21 471 aa19.5■□□□□ 0.71
TMEM88-201ENST00000301599 CEP295NLQ96MC4 621 aa19.5■□□□□ 0.71
TMEM88-201ENST00000301599 MRPL45Q9BRJ2 306 aaKnown RBP19.5■□□□□ 0.71
TMEM88-201ENST00000301599 SMG9Q9H0W8 520 aaKnown RBP19.5■□□□□ 0.71
TMEM88-201ENST00000301599 CRTAC1Q9NQ79 661 aa19.5■□□□□ 0.71
TMEM88-201ENST00000301599 GKN1Q9NS71 199 aa19.5■□□□□ 0.71
TMEM88-201ENST00000301599 GTSE1Q9NYZ3 720 aa19.5■□□□□ 0.71
TMEM88-201ENST00000301599 FAM237AA0A1B0GTK4 181 aa19.49■□□□□ 0.71
TMEM88-201ENST00000301599 SPECC1L-ADORA2AF8WAN1 911 aa19.49■□□□□ 0.71
TMEM88-201ENST00000301599 KINO60870 393 aaKnown RBP19.49■□□□□ 0.71
TMEM88-201ENST00000301599 KIF20AO95235 890 aa19.49■□□□□ 0.71
TMEM88-201ENST00000301599 CHRNB1P11230 501 aa19.49■□□□□ 0.71
TMEM88-201ENST00000301599 BDNFP23560 247 aa19.49■□□□□ 0.71
TMEM88-201ENST00000301599 GRIK1P39086 918 aa19.49■□□□□ 0.71
TMEM88-201ENST00000301599 MYL6P60660 151 aa19.49■□□□□ 0.71
TMEM88-201ENST00000301599 CYP27A1Q02318 531 aa19.49■□□□□ 0.71
TMEM88-201ENST00000301599 LRRC32Q14392 662 aa19.49■□□□□ 0.71
TMEM88-201ENST00000301599 PPP2R5DQ14738 602 aa19.49■□□□□ 0.71
TMEM88-201ENST00000301599 CCDC142Q17RM4 750 aa19.49■□□□□ 0.71
TMEM88-201ENST00000301599 ITPRIPL2Q3MIP1 535 aa19.49■□□□□ 0.71
TMEM88-201ENST00000301599 STKLD1Q8NE28 680 aa19.49■□□□□ 0.71
TMEM88-201ENST00000301599 TTC8Q8TAM2 541 aa19.49■□□□□ 0.71
TMEM88-201ENST00000301599 USP13Q92995 863 aaPredicted RBP19.49■□□□□ 0.71
TMEM88-201ENST00000301599 MYLPFQ96A32 169 aa19.49■□□□□ 0.71
TMEM88-201ENST00000301599 CHAMP1Q96JM3 812 aa19.49■□□□□ 0.71
TMEM88-201ENST00000301599 SPATA17Q96L03 361 aa19.49■□□□□ 0.71
TMEM88-201ENST00000301599 FAM126AQ9BYI3 521 aaPredicted RBP19.49■□□□□ 0.71
TMEM88-201ENST00000301599 GZF1Q9H116 711 aaPredicted RBP19.49■□□□□ 0.71
TMEM88-201ENST00000301599 KIF9Q9HAQ2 790 aa19.49■□□□□ 0.71
TMEM88-201ENST00000301599 ZSCAN32Q9NX65 697 aa19.49■□□□□ 0.71
TMEM88-201ENST00000301599 PCDHGA2Q9Y5H1 932 aa19.49■□□□□ 0.71
TMEM88-201ENST00000301599 RPN1P04843 607 aaKnown RBP19.48■□□□□ 0.71
TMEM88-201ENST00000301599 PTPN1P18031 435 aaKnown RBP19.48■□□□□ 0.71
TMEM88-201ENST00000301599 ANXA13P27216 316 aa19.48■□□□□ 0.71
TMEM88-201ENST00000301599 SOX9P48436 509 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms