RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 KRT28Q7Z3Y7 464 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 MRGPREQ86SM8 312 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 COLGALT2Q8IYK4 626 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 LNX2Q8N448 690 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 CCDC33Q8N5R6 958 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 FANCBQ8NB91 859 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 CYP2W1Q8TAV3 490 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 IPCEF1Q8WWN9 437 aaPredicted RBP5.39□□□□□ -1.55
CCDC54-201ENST00000261058 RAPGEF4Q8WZA2 1011 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 SNX19Q92543 992 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 PLEKHG4BQ96PX9 1271 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 PPP1R9BQ96SB3 815 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 NELL2Q99435 816 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 SELENOOQ9BVL4 669 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 STK31Q9BXU1 1019 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 WDR12Q9GZL7 423 aaKnown RBP5.39□□□□□ -1.55
CCDC54-201ENST00000261058 TRMT13Q9NUP7 481 aaKnown RBP5.39□□□□□ -1.55
CCDC54-201ENST00000261058 INTS13Q9NVM9 706 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 DKK4Q9UBT3 224 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 LPXNO60711 386 aa5.38□□□□□ -1.55
CCDC54-201ENST00000261058 FOSP01100 380 aaPredicted RBP5.38□□□□□ -1.55
CCDC54-201ENST00000261058 ADRB1P08588 477 aa5.38□□□□□ -1.55
CCDC54-201ENST00000261058 SRGNP10124 158 aa5.38□□□□□ -1.55
CCDC54-201ENST00000261058 EGR2P11161 476 aaPredicted RBP5.38□□□□□ -1.55
CCDC54-201ENST00000261058 ABCB4P21439 1286 aa5.38□□□□□ -1.55
CCDC54-201ENST00000261058 KCNA3P22001 575 aa5.38□□□□□ -1.55
CCDC54-201ENST00000261058 PTGS2P35354 604 aa5.38□□□□□ -1.55
CCDC54-201ENST00000261058 PPM1AP35813 382 aa5.38□□□□□ -1.55
CCDC54-201ENST00000261058 DGKEP52429 567 aa5.38□□□□□ -1.55
CCDC54-201ENST00000261058 FPGSQ05932 587 aa5.38□□□□□ -1.55
CCDC54-201ENST00000261058 MYO1EQ12965 1108 aa5.38□□□□□ -1.55
CCDC54-201ENST00000261058 TUBA3CQ13748 450 aa5.38□□□□□ -1.55
CCDC54-201ENST00000261058 MPEG1Q2M385 716 aa5.38□□□□□ -1.55
CCDC54-201ENST00000261058 ARL13BQ3SXY8 428 aa5.38□□□□□ -1.55
CCDC54-201ENST00000261058 MGAT5BQ3V5L5 792 aa5.38□□□□□ -1.55
CCDC54-201ENST00000261058 TUBA3EQ6PEY2 450 aa5.38□□□□□ -1.55
CCDC54-201ENST00000261058 RNF44Q7L0R7 432 aa5.38□□□□□ -1.55
CCDC54-201ENST00000261058 BEND5Q7L4P6 421 aa5.38□□□□□ -1.55
CCDC54-201ENST00000261058 PRRT2Q7Z6L0 340 aaPredicted RBP5.38□□□□□ -1.55
CCDC54-201ENST00000261058 YAF2Q8IY57 180 aa5.38□□□□□ -1.55
CCDC54-201ENST00000261058 ACRBPQ8NEB7 543 aa5.38□□□□□ -1.55
CCDC54-201ENST00000261058 TMEM125Q96AQ2 219 aa5.38□□□□□ -1.55
CCDC54-201ENST00000261058 RNF31Q96EP0 1072 aa5.38□□□□□ -1.55
CCDC54-201ENST00000261058 CXorf36Q9H7Y0 433 aa5.38□□□□□ -1.55
CCDC54-201ENST00000261058 ZNF212Q9UDV6 495 aa5.38□□□□□ -1.55
CCDC54-201ENST00000261058 CDY1Q9Y6F8 540 aa5.38□□□□□ -1.55
CCDC54-201ENST00000261058 A0A0B4J269 797 aa5.37□□□□□ -1.55
CCDC54-201ENST00000261058 TPD52L2O43399 206 aaKnown RBP5.37□□□□□ -1.55
CCDC54-201ENST00000261058 PROM1O43490 865 aa5.37□□□□□ -1.55
CCDC54-201ENST00000261058 PLA2G6O60733 806 aa5.37□□□□□ -1.55
CCDC54-201ENST00000261058 INMTO95050 263 aa5.37□□□□□ -1.55
CCDC54-201ENST00000261058 CSF1RP07333 972 aa5.37□□□□□ -1.55
CCDC54-201ENST00000261058 HARSP12081 509 aaKnown RBP5.37□□□□□ -1.55
CCDC54-201ENST00000261058 HSPA7P48741 367 aa5.37□□□□□ -1.55
CCDC54-201ENST00000261058 CPT1AP50416 773 aa5.37□□□□□ -1.55
CCDC54-201ENST00000261058 DGCR2P98153 550 aa5.37□□□□□ -1.55
CCDC54-201ENST00000261058 TUBB3Q13509 450 aa5.37□□□□□ -1.55
CCDC54-201ENST00000261058 ARHGEF7Q14155 803 aa5.37□□□□□ -1.55
CCDC54-201ENST00000261058 INSCQ1MX18 579 aa5.37□□□□□ -1.55
CCDC54-201ENST00000261058 TIGD2Q4W5G0 525 aa5.37□□□□□ -1.55
CCDC54-201ENST00000261058 RBM20Q5T481 1227 aaKnown RBP5.37□□□□□ -1.55
CCDC54-201ENST00000261058 C10orf62Q5T681 223 aaPredicted RBP5.37□□□□□ -1.55
CCDC54-201ENST00000261058 VPS53Q5VIR6 699 aa5.37□□□□□ -1.55
CCDC54-201ENST00000261058 SFRP4Q6FHJ7 346 aaPredicted RBP5.37□□□□□ -1.55
CCDC54-201ENST00000261058 SPRED1Q7Z699 444 aa5.37□□□□□ -1.55
CCDC54-201ENST00000261058 GPR149Q86SP6 731 aa5.37□□□□□ -1.55
CCDC54-201ENST00000261058 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.37□□□□□ -1.55
CCDC54-201ENST00000261058 SH3RF3Q8TEJ3 882 aaPredicted RBP5.37□□□□□ -1.55
CCDC54-201ENST00000261058 HAS1Q92839 578 aa5.37□□□□□ -1.55
CCDC54-201ENST00000261058 ARPC5LQ9BPX5 153 aa5.37□□□□□ -1.55
CCDC54-201ENST00000261058 EIF2AQ9BY44 585 aaKnown RBP5.37□□□□□ -1.55
CCDC54-201ENST00000261058 AMBRA1Q9C0C7 1298 aa5.37□□□□□ -1.55
CCDC54-201ENST00000261058 VPS11Q9H270 941 aa5.37□□□□□ -1.55
CCDC54-201ENST00000261058 FAM83DQ9H4H8 585 aa5.37□□□□□ -1.55
CCDC54-201ENST00000261058 ARFGAP3Q9NP61 516 aa5.37□□□□□ -1.55
CCDC54-201ENST00000261058 GJB4Q9NTQ9 266 aa5.37□□□□□ -1.55
CCDC54-201ENST00000261058 NDRG4Q9ULP0 352 aaKnown RBP5.37□□□□□ -1.55
CCDC54-201ENST00000261058 SSX2IPQ9Y2D8 614 aa5.37□□□□□ -1.55
CCDC54-201ENST00000261058 TBC1D30Q9Y2I9 924 aa5.37□□□□□ -1.55
CCDC54-201ENST00000261058 IFRD1O00458 451 aaPredicted RBP5.36□□□□□ -1.55
CCDC54-201ENST00000261058 TRIAP1O43715 76 aa5.36□□□□□ -1.55
CCDC54-201ENST00000261058 RRP9O43818 475 aaKnown RBP5.36□□□□□ -1.55
CCDC54-201ENST00000261058 RASSF9O75901 435 aa5.36□□□□□ -1.55
CCDC54-201ENST00000261058 MYL4P12829 197 aa5.36□□□□□ -1.55
CCDC54-201ENST00000261058 EEF1GP26641 437 aaKnown RBP5.36□□□□□ -1.55
CCDC54-201ENST00000261058 GABRB3P28472 473 aa5.36□□□□□ -1.55
CCDC54-201ENST00000261058 GUCY1B3Q02153 619 aa5.36□□□□□ -1.55
CCDC54-201ENST00000261058 TP53BP2Q13625 1128 aa5.36□□□□□ -1.55
CCDC54-201ENST00000261058 SLC29A2Q14542 456 aa5.36□□□□□ -1.55
CCDC54-201ENST00000261058 ZNF750Q32MQ0 723 aa5.36□□□□□ -1.55
CCDC54-201ENST00000261058 FAM83BQ5T0W9 1011 aa5.36□□□□□ -1.55
CCDC54-201ENST00000261058 PLAG1Q6DJT9 500 aa5.36□□□□□ -1.55
CCDC54-201ENST00000261058 LAYNQ6UX15 382 aa5.36□□□□□ -1.55
CCDC54-201ENST00000261058 ENAHQ8N8S7 591 aaPredicted RBP5.36□□□□□ -1.55
CCDC54-201ENST00000261058 BPIFB1Q8TDL5 484 aa5.36□□□□□ -1.55
CCDC54-201ENST00000261058 ASB10Q8WXI3 467 aa5.36□□□□□ -1.55
CCDC54-201ENST00000261058 TMEM41AQ96HV5 264 aa5.36□□□□□ -1.55
CCDC54-201ENST00000261058 TTLL2Q9BWV7 592 aa5.36□□□□□ -1.55
CCDC54-201ENST00000261058 STK33Q9BYT3 514 aa5.36□□□□□ -1.55
CCDC54-201ENST00000261058 TRIM5Q9C035 493 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms