RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A YIL163CP40448 117 aa12.12□□□□□ -0.47
TRN1tP(UGG)A POG1P40473 351 aa12.12□□□□□ -0.47
TRN1tP(UGG)A TY1A-JR2P47099 440 aa12.12□□□□□ -0.47
TRN1tP(UGG)A TOM7P53507 60 aa12.12□□□□□ -0.47
TRN1tP(UGG)A IZH1Q03419 316 aa12.12□□□□□ -0.47
TRN1tP(UGG)A TY1A-DR1Q03856 440 aa12.12□□□□□ -0.47
TRN1tP(UGG)A RAV2Q03956 351 aa12.12□□□□□ -0.47
TRN1tP(UGG)A TY1A-ML1Q04706 440 aaKnown RBP12.12□□□□□ -0.47
TRN1tP(UGG)A TY1A-NL2Q12470 440 aa12.12□□□□□ -0.47
TRN1tP(UGG)A TY1A-GR2Q12485 440 aa12.12□□□□□ -0.47
TRN1tP(UGG)A RTG1P32607 177 aa12.11□□□□□ -0.47
TRN1tP(UGG)A AFR1P33304 620 aa12.11□□□□□ -0.47
TRN1tP(UGG)A HUA1P40325 198 aa12.11□□□□□ -0.47
TRN1tP(UGG)A PHS1P40857 217 aa12.11□□□□□ -0.47
TRN1tP(UGG)A LCB3P47013 409 aa12.11□□□□□ -0.47
TRN1tP(UGG)A TAR1Q8TGM6 124 aa12.11□□□□□ -0.47
TRN1tP(UGG)A MRS1P07266 363 aa12.1□□□□□ -0.47
TRN1tP(UGG)A MBB1P39534 108 aa12.1□□□□□ -0.47
TRN1tP(UGG)A YGR025WP53216 100 aa12.1□□□□□ -0.47
TRN1tP(UGG)A ATX2Q12067 313 aa12.1□□□□□ -0.47
TRN1tP(UGG)A GPI2P46961 280 aa12.09□□□□□ -0.47
TRN1tP(UGG)A YOL160WQ08321 113 aa12.09□□□□□ -0.47
TRN1tP(UGG)A YLR302CO13544 120 aa12.08□□□□□ -0.48
TRN1tP(UGG)A RPB3P16370 318 aaKnown RBP12.08□□□□□ -0.48
TRN1tP(UGG)A COQ3P27680 312 aa12.08□□□□□ -0.48
TRN1tP(UGG)A CYB5P40312 120 aa12.08□□□□□ -0.48
TRN1tP(UGG)A HIT1P46973 164 aa12.08□□□□□ -0.48
TRN1tP(UGG)A BNS1P50084 137 aa12.08□□□□□ -0.48
TRN1tP(UGG)A IZH3Q07959 543 aa12.08□□□□□ -0.48
TRN1tP(UGG)A CNB1P25296 175 aa12.07□□□□□ -0.48
TRN1tP(UGG)A SIM1P40472 476 aa12.07□□□□□ -0.48
TRN1tP(UGG)A YOR011W-AQ3E807 68 aa12.07□□□□□ -0.48
TRN1tP(UGG)A LAC1P28496 418 aa12.06□□□□□ -0.48
TRN1tP(UGG)A TDA4P47153 279 aa12.06□□□□□ -0.48
TRN1tP(UGG)A TRI1Q05024 226 aa12.06□□□□□ -0.48
TRN1tP(UGG)A HTB2P02294 131 aa12.04□□□□□ -0.48
TRN1tP(UGG)A ECM33P38248 429 aaKnown RBP12.04□□□□□ -0.48
TRN1tP(UGG)A MPC2P38857 129 aa12.04□□□□□ -0.48
TRN1tP(UGG)A DAD3P69850 94 aa12.04□□□□□ -0.48
TRN1tP(UGG)A NAT3Q06504 195 aa12.04□□□□□ -0.48
TRN1tP(UGG)A GEP3Q08622 556 aa12.04□□□□□ -0.48
TRN1tP(UGG)A PRM7Q12459 698 aa12.04□□□□□ -0.48
TRN1tP(UGG)A MRPL4P36517 319 aa12.03□□□□□ -0.48
TRN1tP(UGG)A HAM1P47119 197 aaKnown RBP12.03□□□□□ -0.48
TRN1tP(UGG)A YIP3P53633 176 aa12.03□□□□□ -0.48
TRN1tP(UGG)A FYV6P53913 173 aa12.03□□□□□ -0.48
TRN1tP(UGG)A MRPL20P22354 195 aaPredicted RBP12.02□□□□□ -0.49
TRN1tP(UGG)A NTF2P33331 125 aaKnown RBP12.02□□□□□ -0.49
TRN1tP(UGG)A VPS71Q03433 280 aa12.02□□□□□ -0.49
TRN1tP(UGG)A YPR145C-AQ2V2P0 78 aa12.02□□□□□ -0.49
TRN1tP(UGG)A MRPS9P38120 278 aa12.01□□□□□ -0.49
TRN1tP(UGG)A TIM21P53220 239 aa12.01□□□□□ -0.49
TRN1tP(UGG)A ADH3P07246 375 aaKnown RBP12□□□□□ -0.49
TRN1tP(UGG)A ALG13P53178 202 aa12□□□□□ -0.49
TRN1tP(UGG)A GRH1Q04410 372 aaKnown RBP12□□□□□ -0.49
TRN1tP(UGG)A YBR090CP38253 122 aa11.99□□□□□ -0.49
TRN1tP(UGG)A YMR141CP40211 102 aa11.99□□□□□ -0.49
TRN1tP(UGG)A STP4Q07351 490 aa11.99□□□□□ -0.49
TRN1tP(UGG)A RPL31BP0C2H9 113 aaKnown RBP11.98□□□□□ -0.49
TRN1tP(UGG)A COX18P53239 316 aa11.98□□□□□ -0.49
TRN1tP(UGG)A SMT3Q12306 101 aaKnown RBP11.98□□□□□ -0.49
TRN1tP(UGG)A YNL146C-AQ3E7Z1 64 aa11.98□□□□□ -0.49
TRN1tP(UGG)A FMP49A0A023PZB3 126 aa11.97□□□□□ -0.49
TRN1tP(UGG)A TY1A-LR4P0C2I8 440 aaKnown RBP11.97□□□□□ -0.49
TRN1tP(UGG)A TY1A-DR6P0CX70 440 aa11.97□□□□□ -0.49
TRN1tP(UGG)A TY1A-ER1P0CX71 440 aa11.97□□□□□ -0.49
TRN1tP(UGG)A TY1A-LR2P0CX72 440 aa11.97□□□□□ -0.49
TRN1tP(UGG)A TY1A-PLP0CX73 440 aa11.97□□□□□ -0.49
TRN1tP(UGG)A TY1A-JR1P0CX74 440 aa11.97□□□□□ -0.49
TRN1tP(UGG)A TY1A-LR3P0CX75 440 aa11.97□□□□□ -0.49
TRN1tP(UGG)A TY1A-ML2P0CX76 440 aa11.97□□□□□ -0.49
TRN1tP(UGG)A YPT10P38146 199 aa11.97□□□□□ -0.49
TRN1tP(UGG)A PRE5P40302 234 aaKnown RBP11.97□□□□□ -0.49
TRN1tP(UGG)A VMA21P41806 77 aa11.97□□□□□ -0.49
TRN1tP(UGG)A MIC26P50087 233 aa11.97□□□□□ -0.49
TRN1tP(UGG)A YDR274CP87283 123 aa11.97□□□□□ -0.49
TRN1tP(UGG)A YPL162CQ12042 273 aa11.97□□□□□ -0.49
TRN1tP(UGG)A TY1A-GR1Q12085 440 aa11.97□□□□□ -0.49
TRN1tP(UGG)A TY1A-PR3Q6Q5H1 440 aaKnown RBP11.97□□□□□ -0.49
TRN1tP(UGG)A TY1A-OLQ92392 440 aaKnown RBP11.97□□□□□ -0.49
TRN1tP(UGG)A MDM10P18409 493 aa11.96□□□□□ -0.49
TRN1tP(UGG)A ATG8P38182 117 aaRIP-Chip data11.96□□□□□ -0.49not detected
TRN1tP(UGG)A DAD4P69851 72 aa11.96□□□□□ -0.49
TRN1tP(UGG)A ATP19P81451 68 aa11.96□□□□□ -0.49
TRN1tP(UGG)A SRP21P32342 167 aa11.95□□□□□ -0.5
TRN1tP(UGG)A SRP14P38985 146 aa11.95□□□□□ -0.5
TRN1tP(UGG)A DCN1Q12395 269 aa11.95□□□□□ -0.5
TRN1tP(UGG)A AME1P38313 324 aa11.94□□□□□ -0.5
TRN1tP(UGG)A PGD1P40356 397 aa11.94□□□□□ -0.5
TRN1tP(UGG)A YMR244WQ04018 355 aa11.94□□□□□ -0.5
TRN1tP(UGG)A YOR105WQ08504 108 aa11.94□□□□□ -0.5
TRN1tP(UGG)A DAD1Q12248 94 aa11.94□□□□□ -0.5
TRN1tP(UGG)A YLR122CQ12312 125 aa11.94□□□□□ -0.5
TRN1tP(UGG)A HSP10P38910 106 aa11.93□□□□□ -0.5
TRN1tP(UGG)A YLR118CQ12354 227 aa11.93□□□□□ -0.5
TRN1tP(UGG)A PRE9P23638 258 aaKnown RBP11.92□□□□□ -0.5
TRN1tP(UGG)A POF1P25576 258 aa11.92□□□□□ -0.5
TRN1tP(UGG)A YER135CP40082 130 aa11.92□□□□□ -0.5
TRN1tP(UGG)A YDL183CP48569 320 aa11.92□□□□□ -0.5
TRN1tP(UGG)A FZF1P32805 299 aa11.91□□□□□ -0.5
Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms