RNA–Protein interactions for RNA: YLR178C

TFS1, Transcript of Inhibitor of carboxypeptidase Y (Prc1p), and Ras GAP (Ira2p), yeast

Gene TFS1, Length 660 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFS1	YLR178C	FYV6	P53913	173 aa		4.22	□□□□□ -1.73
TFS1	YLR178C	ATC1	Q04005	294 aa		4.22	□□□□□ -1.73
TFS1	YLR178C	YOR015W	Q12169	119 aa		4.22	□□□□□ -1.73
TFS1	YLR178C	RPS8A	P0CX39	200 aa	Known RBP	4.21	□□□□□ -1.74
TFS1	YLR178C	RPS8B	P0CX40	200 aa	Known RBP	4.21	□□□□□ -1.74
TFS1	YLR178C	HSP12	P22943	109 aa	Known RBP	4.21	□□□□□ -1.74
TFS1	YLR178C	COQ3	P27680	312 aa		4.21	□□□□□ -1.74
TFS1	YLR178C	YBL059W	P34224	193 aa		4.21	□□□□□ -1.74
TFS1	YLR178C	SDH4	P37298	181 aa		4.21	□□□□□ -1.74
TFS1	YLR178C	SHG1	P38337	142 aa		4.21	□□□□□ -1.74
TFS1	YLR178C	PET100	P38958	111 aa		4.21	□□□□□ -1.74
TFS1	YLR178C	SNX4	P47057	423 aa		4.21	□□□□□ -1.74
TFS1	YLR178C	RIB4	P50861	169 aa	Predicted RBP	4.21	□□□□□ -1.74
TFS1	YLR178C	YDR274C	P87283	123 aa		4.21	□□□□□ -1.74
TFS1	YLR178C	YLR281C	Q05863	155 aa		4.21	□□□□□ -1.74
TFS1	YLR178C	ATG39	Q06159	398 aa		4.21	□□□□□ -1.74
TFS1	YLR178C	YHR213W	P0CI67	198 aa		4.2	□□□□□ -1.74
TFS1	YLR178C	ZRC1	P20107	442 aa		4.2	□□□□□ -1.74
TFS1	YLR178C	AHT1	P29589	182 aa		4.2	□□□□□ -1.74
TFS1	YLR178C	SIM1	P40472	476 aa		4.2	□□□□□ -1.74
TFS1	YLR178C	YJL027C	P47063	138 aa	Predicted RBP	4.2	□□□□□ -1.74
TFS1	YLR178C	TDA4	P47153	279 aa		4.2	□□□□□ -1.74
TFS1	YLR178C	ADD37	Q03233	198 aa		4.2	□□□□□ -1.74
TFS1	YLR178C	SME1	Q12330	94 aa	Predicted RBP	4.2	□□□□□ -1.74
TFS1	YLR178C	YOR011W-A	Q3E807	68 aa		4.2	□□□□□ -1.74
TFS1	YLR178C	YBR298C-A	Q8TGK4	73 aa		4.2	□□□□□ -1.74
TFS1	YLR178C	MDM10	P18409	493 aa		4.19	□□□□□ -1.74
TFS1	YLR178C	RPL32	P38061	130 aa	Known RBP	4.19	□□□□□ -1.74
TFS1	YLR178C	RIB5	P38145	238 aa		4.19	□□□□□ -1.74
TFS1	YLR178C	GPI2	P46961	280 aa		4.19	□□□□□ -1.74
TFS1	YLR178C	YCL001W-A	P87012	153 aa		4.19	□□□□□ -1.74
TFS1	YLR178C	AVO2	Q04749	426 aa		4.19	□□□□□ -1.74
TFS1	YLR178C	YPL162C	Q12042	273 aa		4.19	□□□□□ -1.74
TFS1	YLR178C	AYT1	Q12226	474 aa		4.19	□□□□□ -1.74
TFS1	YLR178C	EMP24	P32803	203 aa	Known RBP	4.18	□□□□□ -1.74
TFS1	YLR178C	PHD1	P36093	366 aa		4.18	□□□□□ -1.74
TFS1	YLR178C	SRL3	P36167	246 aa		4.18	□□□□□ -1.74
TFS1	YLR178C	LSM2	P38203	95 aa	Known RBP	4.18	□□□□□ -1.74
TFS1	YLR178C	SMD3	P43321	101 aa	Known RBP	4.18	□□□□□ -1.74
TFS1	YLR178C	YIP3	P53633	176 aa		4.18	□□□□□ -1.74
TFS1	YLR178C	IZH1	Q03419	316 aa		4.18	□□□□□ -1.74
TFS1	YLR178C	YPR013C	Q12145	317 aa		4.18	□□□□□ -1.74
TFS1	YLR178C	TAR1	Q8TGM6	124 aa		4.18	□□□□□ -1.74
TFS1	YLR178C	HMX1	P32339	317 aa		4.17	□□□□□ -1.74
TFS1	YLR178C	FLO5	P38894	1075 aa		4.17	□□□□□ -1.74
TFS1	YLR178C	IMP2	P46972	177 aa		4.17	□□□□□ -1.74
TFS1	YLR178C	MCM22	P47167	239 aa		4.17	□□□□□ -1.74
TFS1	YLR178C	DSK2	P48510	373 aa		4.17	□□□□□ -1.74
TFS1	YLR178C	TMA23	Q03525	211 aa		4.17	□□□□□ -1.74
TFS1	YLR178C	COA4	Q05809	96 aa		4.17	□□□□□ -1.74
TFS1	YLR178C	GEP3	Q08622	556 aa		4.17	□□□□□ -1.74
TFS1	YLR178C	YPR145C-A	Q2V2P0	78 aa		4.17	□□□□□ -1.74
TFS1	YLR178C	DYN1	P36022	4092 aa		4.16	□□□□□ -1.74
TFS1	YLR178C	DDI2	P0CH63	225 aa		4.16	□□□□□ -1.74
TFS1	YLR178C	DDI3	P0CH64	225 aa		4.16	□□□□□ -1.74
TFS1	YLR178C	RPB3	P16370	318 aa	Known RBP	4.16	□□□□□ -1.74
TFS1	YLR178C	MSK1	P32048	576 aa		4.16	□□□□□ -1.74
TFS1	YLR178C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
TFS1	YLR178C	RPL14A	P36105	138 aa	Known RBP	4.16	□□□□□ -1.74
TFS1	YLR178C	RPL14B	P38754	138 aa	Known RBP	4.16	□□□□□ -1.74
TFS1	YLR178C	VMA7	P39111	118 aa		4.16	□□□□□ -1.74
TFS1	YLR178C	MBB1	P39534	108 aa		4.16	□□□□□ -1.74
TFS1	YLR178C	SPC25	P40014	221 aa		4.16	□□□□□ -1.74
TFS1	YLR178C	MIC26	P50087	233 aa		4.16	□□□□□ -1.74
TFS1	YLR178C	PAU4	P53427	120 aa		4.16	□□□□□ -1.74
TFS1	YLR178C	MRX11	Q03079	207 aa		4.16	□□□□□ -1.74
TFS1	YLR178C	CRC1	Q12289	327 aa		4.16	□□□□□ -1.74
TFS1	YLR178C	PRM7	Q12459	698 aa		4.16	□□□□□ -1.74
TFS1	YLR178C	COX19	Q3E731	98 aa		4.16	□□□□□ -1.74
TFS1	YLR178C	YNL162W-A	Q3E7A8	72 aa		4.16	□□□□□ -1.74
TFS1	YLR178C	ECM25	P32525	599 aa		4.15	□□□□□ -1.75
TFS1	YLR178C	TRS20	P38334	175 aa		4.15	□□□□□ -1.75
TFS1	YLR178C	YIL024C	P40543	189 aa		4.15	□□□□□ -1.75
TFS1	YLR178C	LCB3	P47013	409 aa		4.15	□□□□□ -1.75
TFS1	YLR178C	SNN1	P48232	102 aa		4.15	□□□□□ -1.75
TFS1	YLR178C	LOA1	Q06508	300 aa		4.15	□□□□□ -1.75
TFS1	YLR178C	SDO1	Q07953	250 aa	Known RBP	4.15	□□□□□ -1.75
TFS1	YLR178C	YOL160W	Q08321	113 aa		4.15	□□□□□ -1.75
TFS1	YLR178C	FIT2	Q08906	153 aa		4.15	□□□□□ -1.75
TFS1	YLR178C	FMP16	Q12497	93 aa		4.15	□□□□□ -1.75
TFS1	YLR178C	MRS1	P07266	363 aa		4.14	□□□□□ -1.75
TFS1	YLR178C	PAU1	P0CE88	120 aa		4.14	□□□□□ -1.75
TFS1	YLR178C	PAU14	P0CE89	120 aa		4.14	□□□□□ -1.75
TFS1	YLR178C	PAU6	P0CE90	120 aa		4.14	□□□□□ -1.75
TFS1	YLR178C	PAU18	P0CE91	120 aa		4.14	□□□□□ -1.75
TFS1	YLR178C	PAU8	P0CE92	120 aa		4.14	□□□□□ -1.75
TFS1	YLR178C	PAU11	P0CE93	120 aa		4.14	□□□□□ -1.75
TFS1	YLR178C	MRPL20	P22354	195 aa	Predicted RBP	4.14	□□□□□ -1.75
TFS1	YLR178C	RPS0A	P32905	252 aa	Known RBP	4.14	□□□□□ -1.75
TFS1	YLR178C	PAU13	P38725	120 aa		4.14	□□□□□ -1.75
TFS1	YLR178C	GLE2	P40066	365 aa		4.14	□□□□□ -1.75
TFS1	YLR178C	AIM24	P47127	394 aa		4.14	□□□□□ -1.75
TFS1	YLR178C	FMP41	P53889	259 aa	Known RBP	4.14	□□□□□ -1.75
TFS1	YLR178C	PAU10	Q03050	120 aa		4.14	□□□□□ -1.75
TFS1	YLR178C	PAU20	Q08322	120 aa		4.14	□□□□□ -1.75
TFS1	YLR178C	YLR112W	Q12130	139 aa		4.14	□□□□□ -1.75
TFS1	YLR178C	ERV2	Q12284	196 aa		4.14	□□□□□ -1.75
TFS1	YLR178C	PAU9	Q3E770	120 aa		4.14	□□□□□ -1.75
TFS1	YLR178C	YNL146C-A	Q3E7Z1	64 aa		4.14	□□□□□ -1.75
TFS1	YLR178C	HTB2	P02294	131 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 94.5 ms