RNA–Protein interactions for RNA: YER021W

RPN3, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome lid, yeastyeast

Gene RPN3, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN3YER021W YMR31P19955 123 aa1.72□□□□□ -2.13
RPN3YER021W RFA3P26755 122 aaKnown RBP1.72□□□□□ -2.13
RPN3YER021W UMP1P38293 148 aa1.72□□□□□ -2.13
RPN3YER021W BFR1P38934 470 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13 RIP-Chip
RPN3YER021W FCY21P40039 528 aa1.72□□□□□ -2.13
RPN3YER021W LST8P41318 303 aa1.72□□□□□ -2.13
RPN3YER021W YGL204CP53089 101 aa1.72□□□□□ -2.13
RPN3YER021W TIM11P81449 96 aaPredicted RBP1.72□□□□□ -2.13
RPN3YER021W BUD25P85052 153 aa1.72□□□□□ -2.13
RPN3YER021W ATG17Q06410 417 aa1.72□□□□□ -2.13
RPN3YER021W YNG1Q08465 219 aa1.72□□□□□ -2.13
RPN3YER021W COX9P07255 59 aa1.71□□□□□ -2.14
RPN3YER021W YCR001WP25347 104 aa1.71□□□□□ -2.14
RPN3YER021W RNP1P32385 249 aa1.71□□□□□ -2.14
RPN3YER021W YPT31P38555 223 aaKnown RBP1.71□□□□□ -2.14
RPN3YER021W PDS1P40316 373 aaPredicted RBP1.71□□□□□ -2.14
RPN3YER021W POR2P40478 281 aa1.71□□□□□ -2.14
RPN3YER021W RMR1P53060 241 aa1.71□□□□□ -2.14
RPN3YER021W ARO8P53090 500 aaKnown RBP1.71□□□□□ -2.14
RPN3YER021W YMR226CQ05016 267 aaKnown RBP1.71□□□□□ -2.14
RPN3YER021W MSH5Q12175 901 aa1.71□□□□□ -2.14
RPN3YER021W YPL229WQ99395 206 aa1.71□□□□□ -2.14
RPN3YER021W RPL24AP04449 155 aaKnown RBP1.7□□□□□ -2.14
RPN3YER021W PET54P10834 293 aa1.7□□□□□ -2.14
RPN3YER021W UBC8P28263 218 aa1.7□□□□□ -2.14
RPN3YER021W DOG2P38773 246 aa1.7□□□□□ -2.14
RPN3YER021W DOG1P38774 246 aa1.7□□□□□ -2.14
RPN3YER021W YHR138CP38841 114 aaPredicted RBP1.7□□□□□ -2.14
RPN3YER021W PET100P38958 111 aa1.7□□□□□ -2.14
RPN3YER021W THO1P40040 218 aaKnown RBP1.7□□□□□ -2.14
RPN3YER021W RTT105P40063 208 aa1.7□□□□□ -2.14
RPN3YER021W YAR1P46683 200 aa1.7□□□□□ -2.14
RPN3YER021W DIE2P50076 525 aa1.7□□□□□ -2.14
RPN3YER021W PAU12P53343 120 aa1.7□□□□□ -2.14
RPN3YER021W QRI5P32344 111 aa1.69□□□□□ -2.14
RPN3YER021W RPB7P34087 171 aa1.69□□□□□ -2.14
RPN3YER021W YUH1P35127 236 aa1.69□□□□□ -2.14
RPN3YER021W RRT1P38192 103 aa1.69□□□□□ -2.14
RPN3YER021W SNF11P38956 169 aa1.69□□□□□ -2.14
RPN3YER021W YAR068WP39564 161 aa1.69□□□□□ -2.14
RPN3YER021W YJR015WP47090 510 aa1.69□□□□□ -2.14
RPN3YER021W MRPS8Q03799 155 aa1.69□□□□□ -2.14
RPN3YER021W HNT1Q04344 158 aaKnown RBP1.69□□□□□ -2.14
RPN3YER021W RAD28Q12021 506 aa1.69□□□□□ -2.14
RPN3YER021W YOR283WQ12040 230 aaKnown RBP1.69□□□□□ -2.14
RPN3YER021W YPL162CQ12042 273 aa1.69□□□□□ -2.14
RPN3YER021W YPL119C-AQ3E751 87 aa1.69□□□□□ -2.14
RPN3YER021W BOL1Q3E793 110 aa1.69□□□□□ -2.14
RPN3YER021W YOR011W-AQ3E807 68 aa1.69□□□□□ -2.14
RPN3YER021W YCR075W-AQ3E830 75 aa1.69□□□□□ -2.14
RPN3YER021W RPL2AP0CX45 254 aaKnown RBP1.68□□□□□ -2.14
RPN3YER021W RPL2BP0CX46 254 aaKnown RBP1.68□□□□□ -2.14
RPN3YER021W RPS11AP0CX47 156 aaKnown RBP1.68□□□□□ -2.14
RPN3YER021W RPS11BP0CX48 156 aaKnown RBP1.68□□□□□ -2.14
RPN3YER021W IDP1P21954 428 aaKnown RBP1.68□□□□□ -2.14
RPN3YER021W CDC10P25342 322 aaKnown RBP1.68□□□□□ -2.14
RPN3YER021W RIB7P33312 244 aa1.68□□□□□ -2.14
RPN3YER021W IRC22P40006 225 aa1.68□□□□□ -2.14
RPN3YER021W SMB1P40018 196 aaKnown RBP1.68□□□□□ -2.14
RPN3YER021W FMC1P40491 155 aa1.68□□□□□ -2.14
RPN3YER021W TMA22P47089 198 aaPredicted RBP1.68□□□□□ -2.14
RPN3YER021W DAN1P47178 298 aa1.68□□□□□ -2.14
RPN3YER021W YGL034CP53186 121 aa1.68□□□□□ -2.14
RPN3YER021W YGR017WP53210 297 aa1.68□□□□□ -2.14
RPN3YER021W YIP3P53633 176 aa1.68□□□□□ -2.14
RPN3YER021W CTF19Q02732 369 aa1.68□□□□□ -2.14
RPN3YER021W YMR252CQ04814 134 aa1.68□□□□□ -2.14
RPN3YER021W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
RPN3YER021W SFK1P35735 353 aa1.68□□□□□ -2.14
RPN3YER021W PAU24P38155 120 aa1.68□□□□□ -2.14
RPN3YER021W TRS20P38334 175 aa1.68□□□□□ -2.14
RPN3YER021W SPC1P46965 94 aa1.68□□□□□ -2.14
RPN3YER021W BXI1P48558 297 aa1.68□□□□□ -2.14
RPN3YER021W NMA1Q06178 401 aaKnown RBP1.68□□□□□ -2.14
RPN3YER021W HRD1Q08109 551 aa1.68□□□□□ -2.14
RPN3YER021W YPR108W-AQ3E7B3 70 aa1.68□□□□□ -2.14
RPN3YER021W YBL008W-AQ3E821 79 aa1.68□□□□□ -2.14
RPN3YER021W YLR365WQ7LIF2 110 aa1.68□□□□□ -2.14
RPN3YER021W PAU2P32612 120 aa1.67□□□□□ -2.14
RPN3YER021W SNU13P39990 126 aaKnown RBP1.67□□□□□ -2.14
RPN3YER021W CAT5P41735 233 aa1.67□□□□□ -2.14
RPN3YER021W GPI2P46961 280 aa1.67□□□□□ -2.14
RPN3YER021W MCM22P47167 239 aa1.67□□□□□ -2.14
RPN3YER021W YGR042WP53227 271 aa1.67□□□□□ -2.14
RPN3YER021W GIM3P53900 129 aa1.67□□□□□ -2.14
RPN3YER021W COA4Q05809 96 aa1.67□□□□□ -2.14
RPN3YER021W SEC22P22214 214 aa1.66□□□□□ -2.14
RPN3YER021W ERG24P32462 438 aaKnown RBP1.66□□□□□ -2.14
RPN3YER021W GPI14P47088 403 aaKnown RBP1.66□□□□□ -2.14
RPN3YER021W TOM7P53507 60 aa1.66□□□□□ -2.14
RPN3YER021W MED4Q12343 284 aa1.66□□□□□ -2.14
RPN3YER021W ATG31Q12421 196 aa1.66□□□□□ -2.14
RPN3YER021W EMC6Q12431 108 aa1.66□□□□□ -2.14
RPN3YER021W YNL146C-AQ3E7Z1 64 aa1.66□□□□□ -2.14
RPN3YER021W SHE2P36068 246 aaKnown RBP RIP-Chip data1.65□□□□□ -2.15not detected
RPN3YER021W YJL027CP47063 138 aaPredicted RBP1.65□□□□□ -2.15
RPN3YER021W CGR1P53188 120 aa1.65□□□□□ -2.15
RPN3YER021W QCR7P00128 127 aa1.64□□□□□ -2.15
RPN3YER021W YDR034C-AP0C289 58 aa1.64□□□□□ -2.15
RPN3YER021W RNA15P25299 296 aaPredicted RBP1.64□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms