RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 TIGD1Q96MW7 591 aa10.83□□□□□ -0.68
PHGDH-222ENST00000641587 SEPT5Q99719 369 aaPredicted RBP10.83□□□□□ -0.68
PHGDH-222ENST00000641587 IL21Q9HBE4 155 aa10.83□□□□□ -0.68
PHGDH-222ENST00000641587 STK17AQ9UEE5 414 aa10.83□□□□□ -0.68
PHGDH-222ENST00000641587 UBQLN1Q9UMX0 589 aaKnown RBP10.83□□□□□ -0.68
PHGDH-222ENST00000641587 DENND4CQ5VZ89 1909 aa10.83□□□□□ -0.68
PHGDH-222ENST00000641587 CACNA1GO43497 2377 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 TM4SF5O14894 197 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 FAM189A1O60320 539 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 RPP40O75818 363 aaKnown RBP10.82□□□□□ -0.68
PHGDH-222ENST00000641587 EPN2O95208 641 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 CLTAP09496 248 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 PLS3P13797 630 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 GUCY2CP25092 1073 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 NMT1P30419 496 aaKnown RBP10.82□□□□□ -0.68
PHGDH-222ENST00000641587 PPP2R3AQ06190 1150 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 MCM6Q14566 821 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 E2F4Q16254 413 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 MGAT5BQ3V5L5 792 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 SLC39A12Q504Y0 691 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 HYIQ5T013 277 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 FSTL4Q6MZW2 842 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 C1orf228Q6PIY5 440 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 ZPBP2Q6X784 338 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 GRAMD1CQ8IYS0 662 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 GIPC2Q8TF65 315 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 GAB3Q8WWW8 586 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 LARP4BQ92615 738 aaKnown RBP10.82□□□□□ -0.68
PHGDH-222ENST00000641587 RAD54LQ92698 747 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 FAM212AQ96EL1 285 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 BICD1Q96G01 975 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 SENP8Q96LD8 212 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 HHIPQ96QV1 700 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 NTPCRQ9BSD7 190 aaKnown RBP10.82□□□□□ -0.68
PHGDH-222ENST00000641587 SLC46A2Q9BY10 475 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 CUEDC2Q9H467 287 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 TASP1Q9H6P5 420 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 C17orf75Q9HAS0 396 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 MAGEF1Q9HAY2 307 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 HPS4Q9NQG7 708 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 ANGPTL2Q9UKU9 493 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 CCL26Q9Y258 94 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 SPEGQ15772 3267 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 MYO16Q9Y6X6 1858 aa10.82□□□□□ -0.68
PHGDH-222ENST00000641587 EGFP01133 1207 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 KRT18P05783 430 aaKnown RBP10.81□□□□□ -0.68
PHGDH-222ENST00000641587 NFICP08651 508 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 CCDC192P0DO97 292 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 ODC1P11926 461 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 ARSAP15289 507 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 TYMPP19971 482 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 CYP3A5P20815 502 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 HOXA6P31267 233 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 RAP1GAPP47736 663 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 LIMK1P53667 647 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 SLC12A3P55017 1021 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 LILRA4P59901 499 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 MYBPC2Q14324 1141 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 POSTNQ15063 836 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 ITPRIPL2Q3MIP1 535 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 ARHGAP15Q53QZ3 475 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 STPG1Q5TH74 334 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 JADE1Q6IE81 842 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 SV2BQ7L1I2 683 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 HAUS6Q7Z4H7 955 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 SYT2Q8N9I0 419 aaPredicted RBP10.81□□□□□ -0.68
PHGDH-222ENST00000641587 LRRC15Q8TF66 581 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 EBF3Q9H4W6 596 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 PLEKHA5Q9HAU0 1116 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 FBRSL1Q9HCM7 1045 aaKnown RBP10.81□□□□□ -0.68
PHGDH-222ENST00000641587 GKN1Q9NS71 199 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 BLOC1S4Q9NUP1 217 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 OBP2AQ9NY56 170 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 ASB3Q9Y575 518 aa10.81□□□□□ -0.68
PHGDH-222ENST00000641587 CHD6Q8TD26 2715 aa10.8□□□□□ -0.68
PHGDH-222ENST00000641587 KIAA1549LQ6ZVL6 1849 aa10.8□□□□□ -0.68
PHGDH-222ENST00000641587 SYCE3A1L190 88 aa10.8□□□□□ -0.68
PHGDH-222ENST00000641587 TISP43B9A030 160 aa10.8□□□□□ -0.68
PHGDH-222ENST00000641587 DCLK1O15075 740 aa10.8□□□□□ -0.68
PHGDH-222ENST00000641587 RNF40O75150 1001 aa10.8□□□□□ -0.68
PHGDH-222ENST00000641587 LETM1O95202 739 aaPredicted RBP10.8□□□□□ -0.68
PHGDH-222ENST00000641587 PRR29P0C7W0 189 aa10.8□□□□□ -0.68
PHGDH-222ENST00000641587 ZNF806P0C7X5 589 aa10.8□□□□□ -0.68
PHGDH-222ENST00000641587 PLA2G4BP0C869 781 aa10.8□□□□□ -0.68
PHGDH-222ENST00000641587 MPLP40238 635 aa10.8□□□□□ -0.68
PHGDH-222ENST00000641587 GPR15P49685 360 aa10.8□□□□□ -0.68
PHGDH-222ENST00000641587 LIG4P49917 911 aa10.8□□□□□ -0.68
PHGDH-222ENST00000641587 SMTNP53814 917 aa10.8□□□□□ -0.68
PHGDH-222ENST00000641587 NCKAP1LP55160 1127 aa10.8□□□□□ -0.68
PHGDH-222ENST00000641587 AMPD3Q01432 767 aa10.8□□□□□ -0.68
PHGDH-222ENST00000641587 PNOCQ13519 176 aa10.8□□□□□ -0.68
PHGDH-222ENST00000641587 ZSCAN23Q3MJ62 389 aa10.8□□□□□ -0.68
PHGDH-222ENST00000641587 ARSHQ5FYA8 562 aa10.8□□□□□ -0.68
PHGDH-222ENST00000641587 TMEM196Q5HYL7 178 aa10.8□□□□□ -0.68
PHGDH-222ENST00000641587 PLA2G2CQ5R387 149 aa10.8□□□□□ -0.68
PHGDH-222ENST00000641587 SPATA1Q5VX52 437 aa10.8□□□□□ -0.68
PHGDH-222ENST00000641587 C9orf57Q5W0N0 161 aa10.8□□□□□ -0.68
PHGDH-222ENST00000641587 ARMCX5Q6P1M9 558 aa10.8□□□□□ -0.68
PHGDH-222ENST00000641587 SLC39A4Q6P5W5 647 aa10.8□□□□□ -0.68
PHGDH-222ENST00000641587 CACNA2D4Q7Z3S7 1137 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms