RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 WEE2P0C1S8 567 aa21.67■■□□□ 1.06
PTCD3-220ENST00000627371 BMP1P13497 986 aa21.67■■□□□ 1.06
PTCD3-220ENST00000627371 CBX2Q14781 532 aaPredicted RBP21.67■■□□□ 1.06
PTCD3-220ENST00000627371 NCAPHQ15003 741 aa21.67■■□□□ 1.06
PTCD3-220ENST00000627371 TJAP1Q5JTD0 557 aa21.67■■□□□ 1.06
PTCD3-220ENST00000627371 ATAT1Q5SQI0 421 aa21.67■■□□□ 1.06
PTCD3-220ENST00000627371 LMO3Q8TAP4 145 aa21.67■■□□□ 1.06
PTCD3-220ENST00000627371 SMG7Q92540 1137 aaKnown RBP21.67■■□□□ 1.06
PTCD3-220ENST00000627371 TATDN2Q93075 761 aa21.67■■□□□ 1.06
PTCD3-220ENST00000627371 TUBGCP2Q9BSJ2 902 aa21.67■■□□□ 1.06
PTCD3-220ENST00000627371 CRTAC1Q9NQ79 661 aa21.67■■□□□ 1.06
PTCD3-220ENST00000627371 FANCLQ9NW38 375 aa21.67■■□□□ 1.06
PTCD3-220ENST00000627371 ABI2Q9NYB9 513 aaPredicted RBP21.67■■□□□ 1.06
PTCD3-220ENST00000627371 YIPF1Q9Y548 306 aa21.67■■□□□ 1.06
PTCD3-220ENST00000627371 PCDHB5Q9Y5E4 795 aa21.67■■□□□ 1.06
PTCD3-220ENST00000627371 CCL16O15467 120 aa21.66■■□□□ 1.06
PTCD3-220ENST00000627371 ATP2C2O75185 946 aa21.66■■□□□ 1.06
PTCD3-220ENST00000627371 XYLBO75191 536 aa21.66■■□□□ 1.06
PTCD3-220ENST00000627371 LRG1P02750 347 aa21.66■■□□□ 1.06
PTCD3-220ENST00000627371 PRKCSHP14314 528 aaPredicted RBP21.66■■□□□ 1.06
PTCD3-220ENST00000627371 MAPRE1Q15691 268 aaKnown RBP21.66■■□□□ 1.06
PTCD3-220ENST00000627371 CCDC142Q17RM4 750 aa21.66■■□□□ 1.06
PTCD3-220ENST00000627371 MIIPQ5JXC2 388 aa21.66■■□□□ 1.06
PTCD3-220ENST00000627371 UNC93AQ86WB7 457 aa21.66■■□□□ 1.06
PTCD3-220ENST00000627371 AOPEPQ8N6M6 819 aa21.66■■□□□ 1.06
PTCD3-220ENST00000627371 TTC9BQ8N6N2 239 aa21.66■■□□□ 1.06
PTCD3-220ENST00000627371 NT5C1BQ96P26 610 aa21.66■■□□□ 1.06
PTCD3-220ENST00000627371 DPEP3Q9H4B8 488 aa21.66■■□□□ 1.06
PTCD3-220ENST00000627371 FAM124BQ9H5Z6 455 aaPredicted RBP21.66■■□□□ 1.06
PTCD3-220ENST00000627371 PIDD1Q9HB75 910 aa21.66■■□□□ 1.06
PTCD3-220ENST00000627371 ABCB6Q9NP58 842 aa21.66■■□□□ 1.06
PTCD3-220ENST00000627371 GCNT4Q9P109 453 aa21.66■■□□□ 1.06
PTCD3-220ENST00000627371 GREB1Q4ZG55 1949 aa21.65■■□□□ 1.06
PTCD3-220ENST00000627371 GTPBP10A4D1E9 387 aaKnown RBP21.65■■□□□ 1.06
PTCD3-220ENST00000627371 PTPN1P18031 435 aaKnown RBP21.65■■□□□ 1.06
PTCD3-220ENST00000627371 TUFMP49411 452 aaKnown RBP21.65■■□□□ 1.06
PTCD3-220ENST00000627371 ZNF165P49910 485 aa21.65■■□□□ 1.06
PTCD3-220ENST00000627371 NDST1P52848 882 aa21.65■■□□□ 1.06
PTCD3-220ENST00000627371 TWF1Q12792 350 aa21.65■■□□□ 1.06
PTCD3-220ENST00000627371 PLD1Q13393 1074 aa21.65■■□□□ 1.06
PTCD3-220ENST00000627371 CUL2Q13617 745 aa21.65■■□□□ 1.06
PTCD3-220ENST00000627371 CFAP221Q4G0U5 840 aa21.65■■□□□ 1.06
PTCD3-220ENST00000627371 VWA3BQ502W6 1294 aa21.65■■□□□ 1.06
PTCD3-220ENST00000627371 C4orf50Q6ZRC1 276 aa21.65■■□□□ 1.06
PTCD3-220ENST00000627371 TTC39CQ8N584 583 aa21.65■■□□□ 1.06
PTCD3-220ENST00000627371 B3GALNT2Q8NCR0 500 aa21.65■■□□□ 1.06
PTCD3-220ENST00000627371 EHBP1Q8NDI1 1231 aa21.65■■□□□ 1.06
PTCD3-220ENST00000627371 MYCBPAPQ8TBZ2 947 aa21.65■■□□□ 1.06
PTCD3-220ENST00000627371 MYLPFQ96A32 169 aa21.65■■□□□ 1.06
PTCD3-220ENST00000627371 FUBP3Q96I24 572 aaKnown RBP eCLIP21.65■■□□□ 1.06
PTCD3-220ENST00000627371 TNIP3Q96KP6 325 aa21.65■■□□□ 1.06
PTCD3-220ENST00000627371 ARID3AQ99856 593 aa21.65■■□□□ 1.06
PTCD3-220ENST00000627371 NDST4Q9H3R1 872 aa21.65■■□□□ 1.06
PTCD3-220ENST00000627371 POMKQ9H5K3 350 aa21.65■■□□□ 1.06
PTCD3-220ENST00000627371 HMGXB4Q9UGU5 601 aa21.65■■□□□ 1.06
PTCD3-220ENST00000627371 SLC27A5Q9Y2P5 690 aa21.65■■□□□ 1.06
PTCD3-220ENST00000627371 DOCK8Q8NF50 2099 aa21.65■■□□□ 1.06
PTCD3-220ENST00000627371 CILPO75339 1184 aa21.64■■□□□ 1.05
PTCD3-220ENST00000627371 HAPLN1P10915 354 aaPredicted RBP21.64■■□□□ 1.05
PTCD3-220ENST00000627371 TBXAS1P24557 533 aaPredicted RBP21.64■■□□□ 1.05
PTCD3-220ENST00000627371 CDR1P51861 262 aa21.64■■□□□ 1.05
PTCD3-220ENST00000627371 LRMPQ12912 555 aa21.64■■□□□ 1.05
PTCD3-220ENST00000627371 MGAT5BQ3V5L5 792 aa21.64■■□□□ 1.05
PTCD3-220ENST00000627371 MDH1BQ5I0G3 518 aa21.64■■□□□ 1.05
PTCD3-220ENST00000627371 SPATA2LQ8IUW3 424 aaPredicted RBP21.64■■□□□ 1.05
PTCD3-220ENST00000627371 DHX40Q8IX18 779 aaKnown RBP21.64■■□□□ 1.05
PTCD3-220ENST00000627371 PCED1BQ96HM7 432 aa21.64■■□□□ 1.05
PTCD3-220ENST00000627371 SEPT5Q99719 369 aaPredicted RBP21.64■■□□□ 1.05
PTCD3-220ENST00000627371 INTS2Q9H0H0 1204 aaKnown RBP21.64■■□□□ 1.05
PTCD3-220ENST00000627371 HSD3B7Q9H2F3 369 aa21.64■■□□□ 1.05
PTCD3-220ENST00000627371 ZNF18P17022 549 aa21.63■■□□□ 1.05
PTCD3-220ENST00000627371 CD58P19256 250 aa21.63■■□□□ 1.05
PTCD3-220ENST00000627371 ALDH1A3P47895 512 aa21.63■■□□□ 1.05
PTCD3-220ENST00000627371 GBP6Q6ZN66 633 aa21.63■■□□□ 1.05
PTCD3-220ENST00000627371 PHF7Q9BWX1 381 aaPredicted RBP21.63■■□□□ 1.05
PTCD3-220ENST00000627371 WDR6Q9NNW5 1121 aaKnown RBP21.63■■□□□ 1.05
PTCD3-220ENST00000627371 CISHQ9NSE2 258 aa21.63■■□□□ 1.05
PTCD3-220ENST00000627371 PRKAG3Q9UGI9 489 aa21.63■■□□□ 1.05
PTCD3-220ENST00000627371 CLUHO75153 1309 aa21.62■■□□□ 1.05
PTCD3-220ENST00000627371 SMTNL1A8MU46 457 aa21.62■■□□□ 1.05
PTCD3-220ENST00000627371 SOAT2O75908 522 aa21.62■■□□□ 1.05
PTCD3-220ENST00000627371 CYP27A1Q02318 531 aa21.62■■□□□ 1.05
PTCD3-220ENST00000627371 KRT31Q15323 416 aa21.62■■□□□ 1.05
PTCD3-220ENST00000627371 EXOC3L4Q17RC7 722 aa21.62■■□□□ 1.05
PTCD3-220ENST00000627371 TRIM65Q6PJ69 517 aa21.62■■□□□ 1.05
PTCD3-220ENST00000627371 GRASPQ7Z6J2 395 aaPredicted RBP21.62■■□□□ 1.05
PTCD3-220ENST00000627371 ACOT1Q86TX2 421 aa21.62■■□□□ 1.05
PTCD3-220ENST00000627371 CRYBG2Q8N1P7 616 aa21.62■■□□□ 1.05
PTCD3-220ENST00000627371 ELMOD1Q8N336 334 aa21.62■■□□□ 1.05
PTCD3-220ENST00000627371 WHAMMQ8TF30 809 aa21.62■■□□□ 1.05
PTCD3-220ENST00000627371 TWNKQ96RR1 684 aa21.62■■□□□ 1.05
PTCD3-220ENST00000627371 LPIN3Q9BQK8 851 aa21.62■■□□□ 1.05
PTCD3-220ENST00000627371 CRACR2AQ9BSW2 395 aa21.62■■□□□ 1.05
PTCD3-220ENST00000627371 NT5C1AQ9BXI3 368 aa21.62■■□□□ 1.05
PTCD3-220ENST00000627371 TAB2Q9NYJ8 693 aa21.62■■□□□ 1.05
PTCD3-220ENST00000627371 CEP72Q9P209 647 aa21.62■■□□□ 1.05
PTCD3-220ENST00000627371 DENND4CQ5VZ89 1909 aa21.62■■□□□ 1.05
PTCD3-220ENST00000627371 A0A0C4DFX4 3053 aa21.61■■□□□ 1.05
PTCD3-220ENST00000627371 CAVIN2O95810 425 aa21.61■■□□□ 1.05
PTCD3-220ENST00000627371 ATF6P18850 670 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms