RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 LSM14BQ9BX40 385 aaKnown RBP8.46□□□□□ -1.06
CLK1-215ENST00000621181 SLC46A2Q9BY10 475 aa8.46□□□□□ -1.06
CLK1-215ENST00000621181 HAPLN2Q9GZV7 340 aa8.46□□□□□ -1.06
CLK1-215ENST00000621181 KCND2Q9NZV8 630 aa8.46□□□□□ -1.06
CLK1-215ENST00000621181 ZMYM5Q9UJ78 669 aa8.46□□□□□ -1.06
CLK1-215ENST00000621181 LIMCH1Q9UPQ0 1083 aa8.46□□□□□ -1.06
CLK1-215ENST00000621181 TCHHQ07283 1943 aa8.46□□□□□ -1.06
CLK1-215ENST00000621181 SPEGQ15772 3267 aa8.46□□□□□ -1.06
CLK1-215ENST00000621181 OGTO15294 1046 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 RNF40O75150 1001 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 GADD45BO75293 160 aaPredicted RBP8.45□□□□□ -1.06
CLK1-215ENST00000621181 KCNK5O95279 499 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 ATF6P18850 670 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 PRPHP41219 470 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 TOB1P50616 345 aaPredicted RBP8.45□□□□□ -1.06
CLK1-215ENST00000621181 ELF2Q15723 593 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 ENOX2Q16206 610 aaKnown RBP8.45□□□□□ -1.06
CLK1-215ENST00000621181 PLA2G2CQ5R387 149 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 FOXD4L5Q5VV16 416 aaPredicted RBP8.45□□□□□ -1.06
CLK1-215ENST00000621181 SPATA1Q5VX52 437 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 TRIM68Q6AZZ1 485 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 JADE1Q6IE81 842 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 TCEAL6Q6IPX3 200 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 FSTL4Q6MZW2 842 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 METTL23Q86XA0 190 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 CAMKK1Q8N5S9 505 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 MAB21L3Q8N8X9 362 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 SYT2Q8N9I0 419 aaPredicted RBP8.45□□□□□ -1.06
CLK1-215ENST00000621181 GIPC2Q8TF65 315 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 FOXD4L4Q8WXT5 416 aaPredicted RBP8.45□□□□□ -1.06
CLK1-215ENST00000621181 TCEAL3Q969E4 200 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 CDK5RAP3Q96JB5 506 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 HHIPQ96QV1 700 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 TSPAN18Q96SJ8 248 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 PLIN2Q99541 437 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 FAM83CQ9BQN1 747 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 MMTAG2Q9BU76 263 aaKnown RBP8.45□□□□□ -1.06
CLK1-215ENST00000621181 VPS45Q9NRW7 570 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 ABI2Q9NYB9 513 aaPredicted RBP8.45□□□□□ -1.06
CLK1-215ENST00000621181 RALYQ9UKM9 306 aaKnown RBP8.45□□□□□ -1.06
CLK1-215ENST00000621181 DSEQ9UL01 958 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 CCL26Q9Y258 94 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 ANK1P16157 1881 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 SYCE3A1L190 88 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 OTOL1A6NHN0 477 aaPredicted RBP8.45□□□□□ -1.06
CLK1-215ENST00000621181 K7ENM7 598 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 TRDMT1O14717 391 aaKnown RBP8.45□□□□□ -1.06
CLK1-215ENST00000621181 AKAP3O75969 853 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 NFICP08651 508 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 PAX3P23760 479 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 U2AF2P26368 475 aaKnown RBP eCLIP8.45□□□□□ -1.069e-7■■■□□ 14.9
CLK1-215ENST00000621181 NOVA1P51513 510 aaKnown RBP8.45□□□□□ -1.06
CLK1-215ENST00000621181 SLC12A3P55017 1021 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 CREB5Q02930 508 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 SMARCB1Q12824 385 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 TMEM132DQ14C87 1099 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 IL17AQ16552 155 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 C9orf57Q5W0N0 161 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 CD302Q8IX05 232 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 THEM5Q8N1Q8 247 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 TTC16Q8NEE8 873 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 SPPL2BQ8TCT7 592 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 EXOC4Q96A65 974 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 ZC3H10Q96K80 434 aaKnown RBP8.45□□□□□ -1.06
CLK1-215ENST00000621181 PYM1Q9BRP8 204 aaKnown RBP8.45□□□□□ -1.06
CLK1-215ENST00000621181 MSTO1Q9BUK6 570 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 EDEM2Q9BV94 578 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 IL21Q9HBE4 155 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 HPS4Q9NQG7 708 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 RYDENQ9NUL5 291 aaKnown RBP8.45□□□□□ -1.06
CLK1-215ENST00000621181 TDP1Q9NUW8 608 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 TBX20Q9UMR3 447 aa8.45□□□□□ -1.06
CLK1-215ENST00000621181 EML5Q05BV3 1969 aa8.44□□□□□ -1.06
CLK1-215ENST00000621181 SCN1AP35498 2009 aa8.44□□□□□ -1.06
CLK1-215ENST00000621181 ATRXP46100 2492 aa8.44□□□□□ -1.06
CLK1-215ENST00000621181 NPHP3-ACAD11A0A0J9YXS1 232 aa8.44□□□□□ -1.06
CLK1-215ENST00000621181 FAM189A1O60320 539 aa8.44□□□□□ -1.06
CLK1-215ENST00000621181 RHOBTB1O94844 696 aa8.44□□□□□ -1.06
CLK1-215ENST00000621181 EGFP01133 1207 aa8.44□□□□□ -1.06
CLK1-215ENST00000621181 CYP11A1P05108 521 aa8.44□□□□□ -1.06
CLK1-215ENST00000621181 PLA2G4BP0C869 781 aa8.44□□□□□ -1.06
CLK1-215ENST00000621181 ZSCAN22P10073 491 aaPredicted RBP8.44□□□□□ -1.06
CLK1-215ENST00000621181 DRD1P21728 446 aa8.44□□□□□ -1.06
CLK1-215ENST00000621181 GBP1P32455 592 aa8.44□□□□□ -1.06
CLK1-215ENST00000621181 NCKAP1LP55160 1127 aa8.44□□□□□ -1.06
CLK1-215ENST00000621181 PSMD2Q13200 908 aa8.44□□□□□ -1.06
CLK1-215ENST00000621181 KARSQ15046 597 aaKnown RBP8.44□□□□□ -1.06
CLK1-215ENST00000621181 PLK5Q496M5 336 aa8.44□□□□□ -1.06
CLK1-215ENST00000621181 FBXO43Q4G163 708 aa8.44□□□□□ -1.06
CLK1-215ENST00000621181 TXNDC8Q6A555 127 aa8.44□□□□□ -1.06
CLK1-215ENST00000621181 RPLP0P6Q8NHW5 317 aa8.44□□□□□ -1.06
CLK1-215ENST00000621181 C2orf15Q8WU43 125 aaKnown RBP8.44□□□□□ -1.06
CLK1-215ENST00000621181 MRPS31Q92665 395 aaKnown RBP8.44□□□□□ -1.06
CLK1-215ENST00000621181 USP13Q92995 863 aaPredicted RBP8.44□□□□□ -1.06
CLK1-215ENST00000621181 TRIM44Q96DX7 344 aaPredicted RBP8.44□□□□□ -1.06
CLK1-215ENST00000621181 P2RY13Q9BPV8 354 aa8.44□□□□□ -1.06
CLK1-215ENST00000621181 ZCWPW1Q9H0M4 648 aa8.44□□□□□ -1.06
CLK1-215ENST00000621181 KIF9Q9HAQ2 790 aa8.44□□□□□ -1.06
CLK1-215ENST00000621181 POLR3BQ9NW08 1133 aaPredicted RBP8.44□□□□□ -1.06
CLK1-215ENST00000621181 ODF2LQ9ULJ1 636 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms