RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 ZNF34Q8IZ26 560 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 USP6NLQ92738 828 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 ERP27Q96DN0 273 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 DSEQ9UL01 958 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 KIAA1257Q9ULG3 409 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 FHOD1Q9Y613 1164 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 TMEM131LA2VDJ0 1609 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 CNTNAP4Q9C0A0 1308 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 FAM200BP0CF97 657 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 ITGA4P13612 1032 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 MRPS15P82914 257 aaKnown RBP4.76□□□□□ -1.65
CHD9-221ENST00000615216 CYTH1Q15438 398 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 KIAA2013Q8IYS2 634 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 SHCBP1Q8NEM2 672 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 ZNF526Q8TF50 670 aaPredicted RBP4.76□□□□□ -1.65
CHD9-221ENST00000615216 GPRASP2Q96D09 838 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 MRPL48Q96GC5 212 aaKnown RBP4.76□□□□□ -1.65
CHD9-221ENST00000615216 ZSWIM1Q9BR11 485 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 ZNF518BQ9C0D4 1074 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 CPVLQ9H3G5 476 aa4.76□□□□□ -1.65
CHD9-221ENST00000615216 C1orf167Q5SNV9 1468 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 H7C4K7 107 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 TM9SF1O15321 606 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 TOMM70O94826 608 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 CUL2Q13617 745 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 TFDP3Q5H9I0 405 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 ACBD5Q5T8D3 534 aaPredicted RBP4.75□□□□□ -1.65
CHD9-221ENST00000615216 BARGINQ6ZT62 677 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 E2F7Q96AV8 911 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 HPDLQ96IR7 371 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 CHP1Q99653 195 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 CINPQ9BW66 212 aaPredicted RBP4.75□□□□□ -1.65
CHD9-221ENST00000615216 EPS8L2Q9H6S3 715 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 TMEM161AQ9NX61 479 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 RGL1Q9NZL6 768 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 AAR2Q9Y312 384 aaKnown RBP4.75□□□□□ -1.65
CHD9-221ENST00000615216 KANSL1LA0AUZ9 987 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 EVPLLA8MZ36 301 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 MYO1GB0I1T2 1018 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 GOLGA8RI6L899 631 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 SOX6P35712 828 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 GNL1P36915 607 aaPredicted RBP4.75□□□□□ -1.65
CHD9-221ENST00000615216 HARS2P49590 506 aaKnown RBP4.75□□□□□ -1.65
CHD9-221ENST00000615216 NCALDP61601 193 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 LAMC2Q13753 1193 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 SLC30A9Q6PML9 568 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 TBC1D16Q8TBP0 767 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 OTUD5Q96G74 571 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 NAT9Q9BTE0 207 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 EPC1Q9H2F5 836 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.75□□□□□ -1.65
CHD9-221ENST00000615216 PPP1R3GB7ZBB8 358 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 E7ENQ6 273 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 CES2O00748 559 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 TIMM44O43615 452 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 HBP1O60381 514 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 NDUFB10O96000 172 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 HNRNPCP07910 306 aaKnown RBP eCLIP4.75□□□□□ -1.651e-6■■□□□ 14.2
CHD9-221ENST00000615216 STIP1P31948 543 aaKnown RBP4.75□□□□□ -1.65
CHD9-221ENST00000615216 NCKAP1LP55160 1127 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 EIF2B5Q13144 721 aaKnown RBP4.75□□□□□ -1.65
CHD9-221ENST00000615216 STX5Q13190 355 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 CHI3L2Q15782 390 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 TRIM65Q6PJ69 517 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 NYAP1Q6ZVC0 841 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 TTC30AQ86WT1 665 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 SEPT1Q8WYJ6 367 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 RSPH1Q8WYR4 309 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 TMEM143Q96AN5 459 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 CCT7Q99832 543 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 SLC7A5P2Q9GIP4 190 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 NDUFA13Q9P0J0 144 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 H2AFY2Q9P0M6 372 aaPredicted RBP4.75□□□□□ -1.65
CHD9-221ENST00000615216 IGF2BP3O00425 579 aaKnown RBP eCLIP4.75□□□□□ -1.65
CHD9-221ENST00000615216 FBXO21O94952 628 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 ENO3P13929 434 aaPredicted RBP4.75□□□□□ -1.65
CHD9-221ENST00000615216 CTCFP49711 727 aaPredicted RBP4.75□□□□□ -1.65
CHD9-221ENST00000615216 MAPK7Q13164 816 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 BOLA3Q53S33 107 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 PTRHD1Q6GMV3 140 aaKnown RBP4.75□□□□□ -1.65
CHD9-221ENST00000615216 GPAT2Q6NUI2 795 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 WDR93Q6P2C0 686 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 PLEKHM3Q6ZWE6 761 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 CNDP1Q96KN2 507 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 RMND5AQ9H871 391 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 AGPAT5Q9NUQ2 364 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 GTF3C4Q9UKN8 822 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 CHMP2BQ9UQN3 213 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 HEATR9A2RTY3 570 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 GLRA3O75311 464 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 SSTR3P32745 418 aaPredicted RBP4.75□□□□□ -1.65
CHD9-221ENST00000615216 PPP3CCP48454 512 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 HMGCS2P54868 508 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 SFSWAPQ12872 951 aaKnown RBP4.75□□□□□ -1.65
CHD9-221ENST00000615216 PKN2Q16513 984 aaKnown RBP4.75□□□□□ -1.65
CHD9-221ENST00000615216 HIST2H2ACQ16777 129 aaPredicted RBP4.75□□□□□ -1.65
CHD9-221ENST00000615216 TTLL9Q3SXZ7 439 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 HIST2H2AA3Q6FI13 130 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 C11orf63Q6NUN7 778 aa4.75□□□□□ -1.65
CHD9-221ENST00000615216 PRMT9Q6P2P2 845 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms