RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 FSHRP23945 695 aa21.43■■□□□ 1.02
SSBP4-210ENST00000601444 CYP2F1P24903 491 aa21.43■■□□□ 1.02
SSBP4-210ENST00000601444 ERCC5P28715 1186 aaPredicted RBP21.43■■□□□ 1.02
SSBP4-210ENST00000601444 ALDH1A3P47895 512 aa21.43■■□□□ 1.02
SSBP4-210ENST00000601444 GPR15P49685 360 aa21.43■■□□□ 1.02
SSBP4-210ENST00000601444 SMARCB1Q12824 385 aa21.43■■□□□ 1.02
SSBP4-210ENST00000601444 ORC1Q13415 861 aa21.43■■□□□ 1.02
SSBP4-210ENST00000601444 NFE2Q16621 373 aaPredicted RBP21.43■■□□□ 1.02
SSBP4-210ENST00000601444 PABPC1LQ4VXU2 614 aaKnown RBP21.43■■□□□ 1.02
SSBP4-210ENST00000601444 HSP90AA4PQ58FG1 418 aa21.43■■□□□ 1.02
SSBP4-210ENST00000601444 SASS6Q6UVJ0 657 aa21.43■■□□□ 1.02
SSBP4-210ENST00000601444 GET4Q7L5D6 327 aaPredicted RBP21.43■■□□□ 1.02
SSBP4-210ENST00000601444 ITFG1Q8TB96 612 aa21.43■■□□□ 1.02
SSBP4-210ENST00000601444 SPPL2BQ8TCT7 592 aa21.43■■□□□ 1.02
SSBP4-210ENST00000601444 GPR152Q8TDT2 470 aa21.43■■□□□ 1.02
SSBP4-210ENST00000601444 C2orf15Q8WU43 125 aaKnown RBP21.43■■□□□ 1.02
SSBP4-210ENST00000601444 MYLPFQ96A32 169 aa21.43■■□□□ 1.02
SSBP4-210ENST00000601444 CNOT6LQ96LI5 555 aaKnown RBP21.43■■□□□ 1.02
SSBP4-210ENST00000601444 ZNF512Q96ME7 567 aaPredicted RBP21.43■■□□□ 1.02
SSBP4-210ENST00000601444 MYADMQ96S97 322 aa21.43■■□□□ 1.02
SSBP4-210ENST00000601444 BCO2Q9BYV7 579 aa21.43■■□□□ 1.02
SSBP4-210ENST00000601444 HSFX1Q9UBD0 423 aa21.43■■□□□ 1.02
SSBP4-210ENST00000601444 HMGXB4Q9UGU5 601 aa21.43■■□□□ 1.02
SSBP4-210ENST00000601444 DACH1Q9UI36 760 aa21.43■■□□□ 1.02
SSBP4-210ENST00000601444 NR2E1Q9Y466 385 aa21.43■■□□□ 1.02
SSBP4-210ENST00000601444 CCDC192P0DO97 292 aa21.42■■□□□ 1.02
SSBP4-210ENST00000601444 P4HA1P13674 534 aa21.42■■□□□ 1.02
SSBP4-210ENST00000601444 PTPN1P18031 435 aaKnown RBP21.42■■□□□ 1.02
SSBP4-210ENST00000601444 KCNH2Q12809 1159 aa21.42■■□□□ 1.02
SSBP4-210ENST00000601444 TPD52L1Q16890 204 aaPredicted RBP21.42■■□□□ 1.02
SSBP4-210ENST00000601444 SLC5A9Q2M3M2 681 aa21.42■■□□□ 1.02
SSBP4-210ENST00000601444 MDH1BQ5I0G3 518 aa21.42■■□□□ 1.02
SSBP4-210ENST00000601444 SDHAF4Q5VUM1 108 aa21.42■■□□□ 1.02
SSBP4-210ENST00000601444 C11orf57Q6ZUT1 292 aaPredicted RBP21.42■■□□□ 1.02
SSBP4-210ENST00000601444 DENND4AQ7Z401 1863 aa21.42■■□□□ 1.02
SSBP4-210ENST00000601444 RNF135Q8IUD6 432 aa21.42■■□□□ 1.02
SSBP4-210ENST00000601444 SPATA2LQ8IUW3 424 aaPredicted RBP21.42■■□□□ 1.02
SSBP4-210ENST00000601444 CCDC150Q8NCX0 1101 aa21.42■■□□□ 1.02
SSBP4-210ENST00000601444 STKLD1Q8NE28 680 aa21.42■■□□□ 1.02
SSBP4-210ENST00000601444 GIPC2Q8TF65 315 aa21.42■■□□□ 1.02
SSBP4-210ENST00000601444 TCEAL4Q96EI5 215 aa21.42■■□□□ 1.02
SSBP4-210ENST00000601444 NIF3L1Q9GZT8 377 aa21.42■■□□□ 1.02
SSBP4-210ENST00000601444 USTQ9Y2C2 406 aa21.42■■□□□ 1.02
SSBP4-210ENST00000601444 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.42■■□□□ 1.02
SSBP4-210ENST00000601444 TNFRSF10AO00220 468 aa21.41■■□□□ 1.02
SSBP4-210ENST00000601444 GBP2P32456 591 aaPredicted RBP21.41■■□□□ 1.02
SSBP4-210ENST00000601444 CCR2P41597 374 aa21.41■■□□□ 1.02
SSBP4-210ENST00000601444 TUFMP49411 452 aaKnown RBP21.41■■□□□ 1.02
SSBP4-210ENST00000601444 NDST1P52848 882 aa21.41■■□□□ 1.02
SSBP4-210ENST00000601444 EPHB3P54753 998 aa21.41■■□□□ 1.02
SSBP4-210ENST00000601444 CYP27A1Q02318 531 aa21.41■■□□□ 1.02
SSBP4-210ENST00000601444 LRMPQ12912 555 aa21.41■■□□□ 1.02
SSBP4-210ENST00000601444 POTEHQ6S545 545 aa21.41■■□□□ 1.02
SSBP4-210ENST00000601444 TDRD5Q8NAT2 981 aaKnown RBP21.41■■□□□ 1.02
SSBP4-210ENST00000601444 ST13P5Q8NFI4 369 aaPredicted RBP21.41■■□□□ 1.02
SSBP4-210ENST00000601444 MYCBPAPQ8TBZ2 947 aa21.41■■□□□ 1.02
SSBP4-210ENST00000601444 PCED1BQ96HM7 432 aa21.41■■□□□ 1.02
SSBP4-210ENST00000601444 TWNKQ96RR1 684 aa21.41■■□□□ 1.02
SSBP4-210ENST00000601444 ARID3AQ99856 593 aa21.41■■□□□ 1.02
SSBP4-210ENST00000601444 DOCK6Q96HP0 2047 aa21.4■■□□□ 1.02
SSBP4-210ENST00000601444 CD58P19256 250 aa21.4■■□□□ 1.02
SSBP4-210ENST00000601444 BDNFP23560 247 aa21.4■■□□□ 1.02
SSBP4-210ENST00000601444 PLD1Q13393 1074 aa21.4■■□□□ 1.02
SSBP4-210ENST00000601444 DDR2Q16832 855 aa21.4■■□□□ 1.02
SSBP4-210ENST00000601444 WDR44Q5JSH3 913 aa21.4■■□□□ 1.02
SSBP4-210ENST00000601444 IQCEQ6IPM2 695 aa21.4■■□□□ 1.02
SSBP4-210ENST00000601444 OTOP3Q7RTS5 596 aa21.4■■□□□ 1.02
SSBP4-210ENST00000601444 DNAJB7Q7Z6W7 309 aaPredicted RBP21.4■■□□□ 1.02
SSBP4-210ENST00000601444 ACOT1Q86TX2 421 aa21.4■■□□□ 1.02
SSBP4-210ENST00000601444 ELMOD1Q8N336 334 aa21.4■■□□□ 1.02
SSBP4-210ENST00000601444 B3GALNT2Q8NCR0 500 aa21.4■■□□□ 1.02
SSBP4-210ENST00000601444 FAM200AQ8TCP9 573 aa21.4■■□□□ 1.02
SSBP4-210ENST00000601444 ING5Q8WYH8 240 aa21.4■■□□□ 1.02
SSBP4-210ENST00000601444 LRRC3Q9BY71 257 aa21.4■■□□□ 1.02
SSBP4-210ENST00000601444 THAP9Q9H5L6 903 aa21.4■■□□□ 1.02
SSBP4-210ENST00000601444 ZNF334Q9HCZ1 680 aaPredicted RBP21.4■■□□□ 1.02
SSBP4-210ENST00000601444 SAMSN1Q9NSI8 373 aaKnown RBP21.4■■□□□ 1.02
SSBP4-210ENST00000601444 MAGEC2Q9UBF1 373 aaPredicted RBP21.4■■□□□ 1.02
SSBP4-210ENST00000601444 LIMD1Q9UGP4 676 aa21.4■■□□□ 1.02
SSBP4-210ENST00000601444 CLDN5O00501 218 aa21.39■■□□□ 1.01
SSBP4-210ENST00000601444 AFPP02771 609 aaKnown RBP21.39■■□□□ 1.01
SSBP4-210ENST00000601444 MYL4P12829 197 aa21.39■■□□□ 1.01
SSBP4-210ENST00000601444 GJA1P17302 382 aa21.39■■□□□ 1.01
SSBP4-210ENST00000601444 CFAP221Q4G0U5 840 aa21.39■■□□□ 1.01
SSBP4-210ENST00000601444 CT47A1Q5JQC4 288 aaPredicted RBP21.39■■□□□ 1.01
SSBP4-210ENST00000601444 PRSS36Q5K4E3 855 aa21.39■■□□□ 1.01
SSBP4-210ENST00000601444 TMC8Q8IU68 726 aa21.39■■□□□ 1.01
SSBP4-210ENST00000601444 LMO3Q8TAP4 145 aa21.39■■□□□ 1.01
SSBP4-210ENST00000601444 WHAMMQ8TF30 809 aa21.39■■□□□ 1.01
SSBP4-210ENST00000601444 FGF13Q92913 245 aa21.39■■□□□ 1.01
SSBP4-210ENST00000601444 PSMG2Q969U7 264 aa21.39■■□□□ 1.01
SSBP4-210ENST00000601444 ACSF2Q96CM8 615 aaPredicted RBP21.39■■□□□ 1.01
SSBP4-210ENST00000601444 B3GNT5Q9BYG0 378 aa21.39■■□□□ 1.01
SSBP4-210ENST00000601444 CYP3A43Q9HB55 503 aa21.39■■□□□ 1.01
SSBP4-210ENST00000601444 ABCB6Q9NP58 842 aa21.39■■□□□ 1.01
SSBP4-210ENST00000601444 MRPS23Q9Y3D9 190 aaKnown RBP21.39■■□□□ 1.01
SSBP4-210ENST00000601444 NOTCH4Q99466 2003 aa21.39■■□□□ 1.01
SSBP4-210ENST00000601444 PMM2O15305 246 aa21.38■■□□□ 1.01
SSBP4-210ENST00000601444 MOSPD3O75425 235 aa21.38■■□□□ 1.01
SSBP4-210ENST00000601444 ASGR2P07307 311 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms